RNA–Protein interactions for RNA: ENST00000587256.1

ATG4D-207, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 607 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-207ENST00000587256 ZNF468Q5VIY5 522 aaPredicted RBP13.79□□□□□ -0.2
ATG4D-207ENST00000587256 ACSM2BQ68CK6 577 aa13.79□□□□□ -0.2
ATG4D-207ENST00000587256 SPINK14Q6IE38 97 aa13.79□□□□□ -0.2
ATG4D-207ENST00000587256 TMEM156Q8N614 296 aa13.79□□□□□ -0.2
ATG4D-207ENST00000587256 ZNF321PQ8N8H1 164 aa13.79□□□□□ -0.2
ATG4D-207ENST00000587256 TMEM178AQ8NBL3 297 aa13.79□□□□□ -0.2
ATG4D-207ENST00000587256 TMEM125Q96AQ2 219 aa13.79□□□□□ -0.2
ATG4D-207ENST00000587256 TAAR6Q96RI8 345 aa13.79□□□□□ -0.2
ATG4D-207ENST00000587256 TMEM109Q9BVC6 243 aa13.79□□□□□ -0.2
ATG4D-207ENST00000587256 HES7Q9BYE0 225 aa13.79□□□□□ -0.2
ATG4D-207ENST00000587256 SHCBP1LQ9BZQ2 653 aa13.79□□□□□ -0.2
ATG4D-207ENST00000587256 PLLPQ9Y342 182 aa13.79□□□□□ -0.2
ATG4D-207ENST00000587256 LRRK2Q5S007 2527 aa13.79□□□□□ -0.2
ATG4D-207ENST00000587256 GNG14A0A1W2PPG7 69 aa13.78□□□□□ -0.2
ATG4D-207ENST00000587256 WASHC1A8K0Z3 465 aa13.78□□□□□ -0.2
ATG4D-207ENST00000587256 CDK2AP1O14519 115 aa13.78□□□□□ -0.2
ATG4D-207ENST00000587256 RGS16O15492 202 aaPredicted RBP13.78□□□□□ -0.2
ATG4D-207ENST00000587256 PCDH7O60245 1069 aa13.78□□□□□ -0.2
ATG4D-207ENST00000587256 PRKNO60260 465 aaPredicted RBP13.78□□□□□ -0.2
ATG4D-207ENST00000587256 CRYABP02511 175 aaKnown RBP13.78□□□□□ -0.2
ATG4D-207ENST00000587256 TRHRP34981 398 aaPredicted RBP13.78□□□□□ -0.2
ATG4D-207ENST00000587256 ALDH9A1P49189 494 aa13.78□□□□□ -0.2
ATG4D-207ENST00000587256 HLCSP50747 726 aa13.78□□□□□ -0.2
ATG4D-207ENST00000587256 FOXA1P55317 472 aa13.78□□□□□ -0.2
ATG4D-207ENST00000587256 HMGCS1Q01581 520 aa13.78□□□□□ -0.2
ATG4D-207ENST00000587256 SPIN4Q56A73 249 aa13.78□□□□□ -0.2
ATG4D-207ENST00000587256 C6orf163Q5TEZ5 329 aa13.78□□□□□ -0.2
ATG4D-207ENST00000587256 SCIMPQ6UWF3 145 aa13.78□□□□□ -0.2
ATG4D-207ENST00000587256 CYP4Z2PQ8N1L4 340 aa13.78□□□□□ -0.2
ATG4D-207ENST00000587256 ARMC10Q8N2F6 343 aa13.78□□□□□ -0.2
ATG4D-207ENST00000587256 FAM98AQ8NCA5 519 aaKnown RBP13.78□□□□□ -0.2
ATG4D-207ENST00000587256 TCP10LQ8TDR4 215 aa13.78□□□□□ -0.2
ATG4D-207ENST00000587256 FBXL20Q96IG2 436 aa13.78□□□□□ -0.2
ATG4D-207ENST00000587256 BARD1Q99728 777 aaKnown RBP13.78□□□□□ -0.2
ATG4D-207ENST00000587256 SLX1AQ9BQ83 275 aa13.78□□□□□ -0.2
ATG4D-207ENST00000587256 FAIM2Q9BWQ8 316 aa13.78□□□□□ -0.2
ATG4D-207ENST00000587256 CENPHQ9H3R5 247 aa13.78□□□□□ -0.2
ATG4D-207ENST00000587256 LIN28AQ9H9Z2 209 aaKnown RBP13.78□□□□□ -0.2
ATG4D-207ENST00000587256 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.78□□□□□ -0.2
ATG4D-207ENST00000587256 SENP1Q9P0U3 644 aa13.78□□□□□ -0.2
ATG4D-207ENST00000587256 SLC17A7Q9P2U7 560 aa13.78□□□□□ -0.2
ATG4D-207ENST00000587256 MCM8Q9UJA3 840 aa13.78□□□□□ -0.2
ATG4D-207ENST00000587256 YARS2Q9Y2Z4 477 aaKnown RBP13.78□□□□□ -0.2
ATG4D-207ENST00000587256 PCDHGB6Q9Y5F9 930 aa13.78□□□□□ -0.2
ATG4D-207ENST00000587256 C1orf226A1L170 272 aa13.77□□□□□ -0.21
ATG4D-207ENST00000587256 GOLGA6L10A6NI86 522 aa13.77□□□□□ -0.21
ATG4D-207ENST00000587256 WWP2O00308 870 aa13.77□□□□□ -0.21
ATG4D-207ENST00000587256 PGRMC2O15173 223 aa13.77□□□□□ -0.21
ATG4D-207ENST00000587256 TRIM13O60858 407 aa13.77□□□□□ -0.21
ATG4D-207ENST00000587256 OR2J2O76002 312 aa13.77□□□□□ -0.21
ATG4D-207ENST00000587256 NEURL1O76050 574 aa13.77□□□□□ -0.21
ATG4D-207ENST00000587256 SLC35E2P0CK97 266 aa13.77□□□□□ -0.21
ATG4D-207ENST00000587256 EDN3P14138 238 aa13.77□□□□□ -0.21
ATG4D-207ENST00000587256 TIA1P31483 386 aaKnown RBP eCLIP13.77□□□□□ -0.21
ATG4D-207ENST00000587256 DEKP35659 375 aaKnown RBP13.77□□□□□ -0.21
ATG4D-207ENST00000587256 ERVK-8P63133 956 aa13.77□□□□□ -0.21
ATG4D-207ENST00000587256 RNF4P78317 190 aa13.77□□□□□ -0.21
ATG4D-207ENST00000587256 ZNF267Q14586 743 aaPredicted RBP13.77□□□□□ -0.21
ATG4D-207ENST00000587256 MAPKAPK3Q16644 382 aa13.77□□□□□ -0.21
ATG4D-207ENST00000587256 SPRED3Q2MJR0 410 aa13.77□□□□□ -0.21
ATG4D-207ENST00000587256 SPDYAQ5MJ70 313 aa13.77□□□□□ -0.21
ATG4D-207ENST00000587256 SLC25A25Q6KCM7 469 aa13.77□□□□□ -0.21
ATG4D-207ENST00000587256 C16orf47Q6ZP98 133 aaPredicted RBP13.77□□□□□ -0.21
ATG4D-207ENST00000587256 DGAT2L6Q6ZPD8 337 aa13.77□□□□□ -0.21
ATG4D-207ENST00000587256 GALNTL5Q7Z4T8 443 aa13.77□□□□□ -0.21
ATG4D-207ENST00000587256 GALNT12Q8IXK2 581 aa13.77□□□□□ -0.21
ATG4D-207ENST00000587256 FAM26EQ8N5C1 309 aa13.77□□□□□ -0.21
ATG4D-207ENST00000587256 ST6GALNAC3Q8NDV1 305 aa13.77□□□□□ -0.21
ATG4D-207ENST00000587256 OR4K14Q8NGD5 310 aa13.77□□□□□ -0.21
ATG4D-207ENST00000587256 OR5L2Q8NGL0 311 aa13.77□□□□□ -0.21
ATG4D-207ENST00000587256 OR8K3Q8NH51 312 aa13.77□□□□□ -0.21
ATG4D-207ENST00000587256 PRR7Q8TB68 274 aa13.77□□□□□ -0.21
ATG4D-207ENST00000587256 DOK4Q8TEW6 326 aa13.77□□□□□ -0.21
ATG4D-207ENST00000587256 ZNF721Q8TF20 911 aa13.77□□□□□ -0.21
ATG4D-207ENST00000587256 ASB15Q8WXK1 588 aa13.77□□□□□ -0.21
ATG4D-207ENST00000587256 NR4A3Q92570 626 aa13.77□□□□□ -0.21
ATG4D-207ENST00000587256 RIT1Q92963 219 aa13.77□□□□□ -0.21
ATG4D-207ENST00000587256 UCN3Q969E3 161 aa13.77□□□□□ -0.21
ATG4D-207ENST00000587256 KLHL29Q96CT2 875 aa13.77□□□□□ -0.21
ATG4D-207ENST00000587256 SCMH1Q96GD3 660 aa13.77□□□□□ -0.21
ATG4D-207ENST00000587256 SENP5Q96HI0 755 aaPredicted RBP13.77□□□□□ -0.21
ATG4D-207ENST00000587256 GAL3ST4Q96RP7 486 aa13.77□□□□□ -0.21
ATG4D-207ENST00000587256 TRMOQ9BU70 441 aa13.77□□□□□ -0.21
ATG4D-207ENST00000587256 GATA5Q9BWX5 397 aaPredicted RBP13.77□□□□□ -0.21
ATG4D-207ENST00000587256 MYOTQ9UBF9 498 aa13.77□□□□□ -0.21
ATG4D-207ENST00000587256 ERVK-11Q9UQG0 969 aa13.77□□□□□ -0.21
ATG4D-207ENST00000587256 ERVK-19Q9WJR5 959 aa13.77□□□□□ -0.21
ATG4D-207ENST00000587256 PCDHA9Q9Y5H5 950 aa13.77□□□□□ -0.21
ATG4D-207ENST00000587256 A0A1W2PS29 197 aa13.76□□□□□ -0.21
ATG4D-207ENST00000587256 A8MVJ9 347 aa13.76□□□□□ -0.21
ATG4D-207ENST00000587256 HRKO00198 91 aa13.76□□□□□ -0.21
ATG4D-207ENST00000587256 NME2P1O60361 137 aa13.76□□□□□ -0.21
ATG4D-207ENST00000587256 ERAL1O75616 437 aaKnown RBP13.76□□□□□ -0.21
ATG4D-207ENST00000587256 AGFG2O95081 481 aa13.76□□□□□ -0.21
ATG4D-207ENST00000587256 CBX6O95503 412 aa13.76□□□□□ -0.21
ATG4D-207ENST00000587256 IGKV3-11P04433 115 aa13.76□□□□□ -0.21
ATG4D-207ENST00000587256 SP1P08047 785 aa13.76□□□□□ -0.21
ATG4D-207ENST00000587256 UROSP10746 265 aa13.76□□□□□ -0.21
ATG4D-207ENST00000587256 NME2P22392 152 aa13.76□□□□□ -0.21
ATG4D-207ENST00000587256 ALDH3A1P30838 453 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms