RNA–Protein interactions for RNA: ENST00000587201.5

TPM4-206, Transcript of tropomyosin 4, humanhuman

TSL 2

Gene TPM4, Length 877 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-206ENST00000587201 C3AR1Q16581 482 aa16.41■□□□□ 0.22
TPM4-206ENST00000587201 RNFT1Q5M7Z0 435 aa16.41■□□□□ 0.22
TPM4-206ENST00000587201 ZNF678Q5SXM1 525 aa16.41■□□□□ 0.22
TPM4-206ENST00000587201 LETMD1Q6P1Q0 360 aa16.41■□□□□ 0.22
TPM4-206ENST00000587201 DGAT2L6Q6ZPD8 337 aa16.41■□□□□ 0.22
TPM4-206ENST00000587201 SPPL2CQ8IUH8 684 aa16.41■□□□□ 0.22
TPM4-206ENST00000587201 MYRIPQ8NFW9 859 aa16.41■□□□□ 0.22
TPM4-206ENST00000587201 ACMSDQ8TDX5 336 aa16.41■□□□□ 0.22
TPM4-206ENST00000587201 DOK4Q8TEW6 326 aa16.41■□□□□ 0.22
TPM4-206ENST00000587201 UCN3Q969E3 161 aa16.41■□□□□ 0.22
TPM4-206ENST00000587201 CNPPD1Q9BV87 410 aa16.41■□□□□ 0.22
TPM4-206ENST00000587201 ERVK-6Q9BXR3 956 aa16.41■□□□□ 0.22
TPM4-206ENST00000587201 MRPL1Q9BYD6 325 aaKnown RBP16.41■□□□□ 0.22
TPM4-206ENST00000587201 FARSBQ9NSD9 589 aaKnown RBP16.41■□□□□ 0.22
TPM4-206ENST00000587201 TRPS1Q9UHF7 1281 aa16.41■□□□□ 0.22
TPM4-206ENST00000587201 SLC12A4Q9UP95 1085 aa16.41■□□□□ 0.22
TPM4-206ENST00000587201 DIDO1Q9BTC0 2240 aaKnown RBP16.41■□□□□ 0.22
TPM4-206ENST00000587201 CROCCQ5TZA2 2017 aa16.4■□□□□ 0.22
TPM4-206ENST00000587201 HRKO00198 91 aa16.4■□□□□ 0.22
TPM4-206ENST00000587201 DLX3O60479 287 aa16.4■□□□□ 0.22
TPM4-206ENST00000587201 PDYNP01213 254 aa16.4■□□□□ 0.22
TPM4-206ENST00000587201 ATP5F1P24539 256 aaPredicted RBP16.4■□□□□ 0.22
TPM4-206ENST00000587201 ERVK-8P63133 956 aa16.4■□□□□ 0.22
TPM4-206ENST00000587201 HSF1Q00613 529 aa16.4■□□□□ 0.22
TPM4-206ENST00000587201 ZNF750Q32MQ0 723 aa16.4■□□□□ 0.22
TPM4-206ENST00000587201 UNC50Q53HI1 259 aa16.4■□□□□ 0.22
TPM4-206ENST00000587201 CCNYL2Q5T2Q4 361 aa16.4■□□□□ 0.22
TPM4-206ENST00000587201 OR52E8Q6IFG1 317 aa16.4■□□□□ 0.22
TPM4-206ENST00000587201 OPN5Q6U736 354 aa16.4■□□□□ 0.22
TPM4-206ENST00000587201 CNPY4Q8N129 248 aa16.4■□□□□ 0.22
TPM4-206ENST00000587201 METTL4Q8N3J2 472 aa16.4■□□□□ 0.22
TPM4-206ENST00000587201 EIF1ADQ8N9N8 165 aaKnown RBP16.4■□□□□ 0.22
TPM4-206ENST00000587201 UBLCP1Q8WVY7 318 aaPredicted RBP16.4■□□□□ 0.22
TPM4-206ENST00000587201 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.4■□□□□ 0.22
TPM4-206ENST00000587201 TEX10Q9NXF1 929 aaPredicted RBP16.4■□□□□ 0.22
TPM4-206ENST00000587201 TINAGQ9UJW2 476 aa16.4■□□□□ 0.22
TPM4-206ENST00000587201 ZNF225Q9UK10 706 aa16.4■□□□□ 0.22
TPM4-206ENST00000587201 ADAM29Q9UKF5 820 aa16.4■□□□□ 0.22
TPM4-206ENST00000587201 ERVK-19Q9WJR5 959 aa16.4■□□□□ 0.22
TPM4-206ENST00000587201 PGRMC2O15173 223 aa16.39■□□□□ 0.21
TPM4-206ENST00000587201 HS6ST1O60243 411 aa16.39■□□□□ 0.21
TPM4-206ENST00000587201 IGKV3-11P04433 115 aa16.39■□□□□ 0.21
TPM4-206ENST00000587201 GSTA1P08263 222 aa16.39■□□□□ 0.21
TPM4-206ENST00000587201 ESRRAP11474 423 aaPredicted RBP16.39■□□□□ 0.21
TPM4-206ENST00000587201 ABOP16442 354 aa16.39■□□□□ 0.21
TPM4-206ENST00000587201 IMPDH1P20839 514 aa16.39■□□□□ 0.21
TPM4-206ENST00000587201 ASPHQ12797 758 aa16.39■□□□□ 0.21
TPM4-206ENST00000587201 ZNF267Q14586 743 aaPredicted RBP16.39■□□□□ 0.21
TPM4-206ENST00000587201 MPEG1Q2M385 716 aa16.39■□□□□ 0.21
TPM4-206ENST00000587201 SPRED3Q2MJR0 410 aa16.39■□□□□ 0.21
TPM4-206ENST00000587201 MTFR2Q6P444 385 aa16.39■□□□□ 0.21
TPM4-206ENST00000587201 RTL4Q6ZR62 310 aa16.39■□□□□ 0.21
TPM4-206ENST00000587201 COMMD6Q7Z4G1 85 aa16.39■□□□□ 0.21
TPM4-206ENST00000587201 SLC22A9Q8IVM8 553 aa16.39■□□□□ 0.21
TPM4-206ENST00000587201 C9orf40Q8IXQ3 194 aa16.39■□□□□ 0.21
TPM4-206ENST00000587201 CDYL2Q8N8U2 506 aa16.39■□□□□ 0.21
TPM4-206ENST00000587201 C16orf52Q8NHV5 167 aa16.39■□□□□ 0.21
TPM4-206ENST00000587201 NUBPLQ8TB37 319 aa16.39■□□□□ 0.21
TPM4-206ENST00000587201 MZB1Q8WU39 189 aa16.39■□□□□ 0.21
TPM4-206ENST00000587201 RIT1Q92963 219 aa16.39■□□□□ 0.21
TPM4-206ENST00000587201 CCDC120Q96HB5 630 aa16.39■□□□□ 0.21
TPM4-206ENST00000587201 FBXL20Q96IG2 436 aa16.39■□□□□ 0.21
TPM4-206ENST00000587201 TMEM237Q96Q45 408 aa16.39■□□□□ 0.21
TPM4-206ENST00000587201 BRF2Q9HAW0 419 aa16.39■□□□□ 0.21
TPM4-206ENST00000587201 NMRK1Q9NWW6 199 aa16.39■□□□□ 0.21
TPM4-206ENST00000587201 DCDC2Q9UHG0 476 aa16.39■□□□□ 0.21
TPM4-206ENST00000587201 ZNF835Q9Y2P0 537 aa16.39■□□□□ 0.21
TPM4-206ENST00000587201 ZNHIT1O43257 154 aa16.38■□□□□ 0.21
TPM4-206ENST00000587201 CDC40O60508 579 aaKnown RBP eCLIP16.38■□□□□ 0.21
TPM4-206ENST00000587201 ZNF354AO60765 605 aaPredicted RBP16.38■□□□□ 0.21
TPM4-206ENST00000587201 SLC35E2P0CK97 266 aa16.38■□□□□ 0.21
TPM4-206ENST00000587201 PIK3R1P27986 724 aa16.38■□□□□ 0.21
TPM4-206ENST00000587201 GALNSP34059 522 aa16.38■□□□□ 0.21
TPM4-206ENST00000587201 PTGER1P34995 402 aa16.38■□□□□ 0.21
TPM4-206ENST00000587201 MAPK12P53778 367 aa16.38■□□□□ 0.21
TPM4-206ENST00000587201 PRKAA2P54646 552 aa16.38■□□□□ 0.21
TPM4-206ENST00000587201 PLGLB1Q02325 96 aa16.38■□□□□ 0.21
TPM4-206ENST00000587201 RASA2Q15283 850 aa16.38■□□□□ 0.21
TPM4-206ENST00000587201 PIGGQ5H8A4 983 aa16.38■□□□□ 0.21
TPM4-206ENST00000587201 NDUFAF5Q5TEU4 345 aa16.38■□□□□ 0.21
TPM4-206ENST00000587201 FAM219BQ5XKK7 198 aa16.38■□□□□ 0.21
TPM4-206ENST00000587201 ZNF787Q6DD87 383 aa16.38■□□□□ 0.21
TPM4-206ENST00000587201 BNC2Q6ZN30 1099 aaPredicted RBP16.38■□□□□ 0.21
TPM4-206ENST00000587201 RNF111Q6ZNA4 994 aa16.38■□□□□ 0.21
TPM4-206ENST00000587201 Q6ZPB1 254 aaPredicted RBP16.38■□□□□ 0.21
TPM4-206ENST00000587201 SLC29A4Q7RTT9 530 aa16.38■□□□□ 0.21
TPM4-206ENST00000587201 ZFP62Q8NB50 900 aaPredicted RBP16.38■□□□□ 0.21
TPM4-206ENST00000587201 OR4K14Q8NGD5 310 aa16.38■□□□□ 0.21
TPM4-206ENST00000587201 SLC22A8Q8TCC7 542 aa16.38■□□□□ 0.21
TPM4-206ENST00000587201 GAL3ST4Q96RP7 486 aa16.38■□□□□ 0.21
TPM4-206ENST00000587201 HBEGFQ99075 208 aa16.38■□□□□ 0.21
TPM4-206ENST00000587201 L2HGDHQ9H9P8 463 aa16.38■□□□□ 0.21
TPM4-206ENST00000587201 DEPPQ9NTK1 212 aa16.38■□□□□ 0.21
TPM4-206ENST00000587201 A0A1W2PPM1 405 aa16.37■□□□□ 0.21
TPM4-206ENST00000587201 A0A1W2PS29 197 aa16.37■□□□□ 0.21
TPM4-206ENST00000587201 G3V3Y1 287 aa16.37■□□□□ 0.21
TPM4-206ENST00000587201 MANBAO00462 879 aa16.37■□□□□ 0.21
TPM4-206ENST00000587201 GUCY1B2O75343 617 aa16.37■□□□□ 0.21
TPM4-206ENST00000587201 KRT6AP02538 564 aa16.37■□□□□ 0.21
TPM4-206ENST00000587201 KRT6BP04259 564 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms