RNA–Protein interactions for RNA: ENST00000586441.1

ERCC2-207, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 5

Gene ERCC2, Length 682 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-207ENST00000586441 ITGAMP11215 1152 aa11.6□□□□□ -0.55
ERCC2-207ENST00000586441 PIK3CGP48736 1102 aa11.6□□□□□ -0.55
ERCC2-207ENST00000586441 HSPA7P48741 367 aa11.6□□□□□ -0.55
ERCC2-207ENST00000586441 HSD17B7P56937 341 aa11.6□□□□□ -0.55
ERCC2-207ENST00000586441 ARG2P78540 354 aa11.6□□□□□ -0.55
ERCC2-207ENST00000586441 IRF8Q02556 426 aa11.6□□□□□ -0.55
ERCC2-207ENST00000586441 SRSF1Q07955 248 aaKnown RBP eCLIP11.6□□□□□ -0.55
ERCC2-207ENST00000586441 ART3Q13508 389 aa11.6□□□□□ -0.55
ERCC2-207ENST00000586441 DOC2AQ14183 400 aa11.6□□□□□ -0.55
ERCC2-207ENST00000586441 BTBD16Q32M84 506 aa11.6□□□□□ -0.55
ERCC2-207ENST00000586441 C18orf21Q32NC0 220 aaPredicted RBP11.6□□□□□ -0.55
ERCC2-207ENST00000586441 UGT3A2Q3SY77 523 aa11.6□□□□□ -0.55
ERCC2-207ENST00000586441 TMEM35AQ53FP2 167 aa11.6□□□□□ -0.55
ERCC2-207ENST00000586441 XKR6Q5GH73 641 aa11.6□□□□□ -0.55
ERCC2-207ENST00000586441 FHL5Q5TD97 284 aa11.6□□□□□ -0.55
ERCC2-207ENST00000586441 LINC00696Q6ZRV3 163 aa11.6□□□□□ -0.55
ERCC2-207ENST00000586441 GPRIN3Q6ZVF9 776 aa11.6□□□□□ -0.55
ERCC2-207ENST00000586441 LARP4Q71RC2 724 aaKnown RBP eCLIP11.6□□□□□ -0.55
ERCC2-207ENST00000586441 RPS27LQ71UM5 84 aaKnown RBP11.6□□□□□ -0.55
ERCC2-207ENST00000586441 SPATA19Q7Z5L4 167 aa11.6□□□□□ -0.55
ERCC2-207ENST00000586441 SNX32Q86XE0 403 aa11.6□□□□□ -0.55
ERCC2-207ENST00000586441 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.6□□□□□ -0.55
ERCC2-207ENST00000586441 LAS2Q8IYD9 372 aa11.6□□□□□ -0.55
ERCC2-207ENST00000586441 ARMC10Q8N2F6 343 aa11.6□□□□□ -0.55
ERCC2-207ENST00000586441 TWIST2Q8WVJ9 160 aa11.6□□□□□ -0.55
ERCC2-207ENST00000586441 FAR1Q8WVX9 515 aa11.6□□□□□ -0.55
ERCC2-207ENST00000586441 PTGFRNQ9P2B2 879 aa11.6□□□□□ -0.55
ERCC2-207ENST00000586441 BCAP29Q9UHQ4 241 aa11.6□□□□□ -0.55
ERCC2-207ENST00000586441 USP9XQ93008 2570 aaPredicted RBP11.6□□□□□ -0.55
ERCC2-207ENST00000586441 COL12A1Q99715 3063 aa11.59□□□□□ -0.55
ERCC2-207ENST00000586441 RELNP78509 3460 aa11.59□□□□□ -0.55
ERCC2-207ENST00000586441 TCRBV16S1A1N1A0A5B0 115 aa11.59□□□□□ -0.55
ERCC2-207ENST00000586441 BLACEA4D250 179 aa11.59□□□□□ -0.55
ERCC2-207ENST00000586441 PRAMEF4O60810 478 aa11.59□□□□□ -0.55
ERCC2-207ENST00000586441 DDAH2O95865 285 aa11.59□□□□□ -0.55
ERCC2-207ENST00000586441 OTCP00480 354 aa11.59□□□□□ -0.55
ERCC2-207ENST00000586441 EPB42P16452 691 aa11.59□□□□□ -0.55
ERCC2-207ENST00000586441 LBPP18428 481 aa11.59□□□□□ -0.55
ERCC2-207ENST00000586441 EPORP19235 508 aa11.59□□□□□ -0.55
ERCC2-207ENST00000586441 GNLYP22749 145 aa11.59□□□□□ -0.55
ERCC2-207ENST00000586441 HNF4AP41235 474 aa11.59□□□□□ -0.55
ERCC2-207ENST00000586441 OR4D2P58180 307 aa11.59□□□□□ -0.55
ERCC2-207ENST00000586441 RAB8AP61006 207 aa11.59□□□□□ -0.55
ERCC2-207ENST00000586441 BTN3A2P78410 334 aa11.59□□□□□ -0.55
ERCC2-207ENST00000586441 SLC25A3Q00325 362 aa11.59□□□□□ -0.55
ERCC2-207ENST00000586441 CHIT1Q13231 466 aa11.59□□□□□ -0.55
ERCC2-207ENST00000586441 KPNB1Q14974 876 aaKnown RBP11.59□□□□□ -0.55
ERCC2-207ENST00000586441 GSTA3Q16772 222 aa11.59□□□□□ -0.55
ERCC2-207ENST00000586441 MEP1AQ16819 746 aa11.59□□□□□ -0.55
ERCC2-207ENST00000586441 SFT2D3Q587I9 215 aa11.59□□□□□ -0.55
ERCC2-207ENST00000586441 TOR1AIP1Q5JTV8 583 aa11.59□□□□□ -0.55
ERCC2-207ENST00000586441 PRAMEF9Q5VWM5 478 aa11.59□□□□□ -0.55
ERCC2-207ENST00000586441 LIPJQ5W064 366 aa11.59□□□□□ -0.55
ERCC2-207ENST00000586441 TMEM198Q66K66 360 aa11.59□□□□□ -0.55
ERCC2-207ENST00000586441 CLEC6AQ6EIG7 209 aa11.59□□□□□ -0.55
ERCC2-207ENST00000586441 TRIM40Q6P9F5 258 aa11.59□□□□□ -0.55
ERCC2-207ENST00000586441 ABHD17CQ6PCB6 329 aa11.59□□□□□ -0.55
ERCC2-207ENST00000586441 PAPD4Q6PIY7 484 aaKnown RBP11.59□□□□□ -0.55
ERCC2-207ENST00000586441 LANCL3Q6ZV70 420 aa11.59□□□□□ -0.55
ERCC2-207ENST00000586441 ZNF595Q8IYB9 648 aa11.59□□□□□ -0.55
ERCC2-207ENST00000586441 ST6GALNAC3Q8NDV1 305 aa11.59□□□□□ -0.55
ERCC2-207ENST00000586441 OR5T3Q8NGG3 340 aa11.59□□□□□ -0.55
ERCC2-207ENST00000586441 OR1N1Q8NGS0 311 aa11.59□□□□□ -0.55
ERCC2-207ENST00000586441 DNAJB8Q8NHS0 232 aa11.59□□□□□ -0.55
ERCC2-207ENST00000586441 SUN3Q8TAQ9 357 aa11.59□□□□□ -0.55
ERCC2-207ENST00000586441 ELP5Q8TE02 316 aa11.59□□□□□ -0.55
ERCC2-207ENST00000586441 JADE3Q92613 823 aa11.59□□□□□ -0.55
ERCC2-207ENST00000586441 PTCHD1Q96NR3 888 aa11.59□□□□□ -0.55
ERCC2-207ENST00000586441 ANKRD27Q96NW4 1050 aa11.59□□□□□ -0.55
ERCC2-207ENST00000586441 QRFPRQ96P65 431 aa11.59□□□□□ -0.55
ERCC2-207ENST00000586441 KCNC2Q96PR1 638 aa11.59□□□□□ -0.55
ERCC2-207ENST00000586441 SERINC2Q96SA4 455 aa11.59□□□□□ -0.55
ERCC2-207ENST00000586441 TBCDQ9BTW9 1192 aa11.59□□□□□ -0.55
ERCC2-207ENST00000586441 REXO4Q9GZR2 422 aaKnown RBP11.59□□□□□ -0.55
ERCC2-207ENST00000586441 AICDAQ9GZX7 198 aa11.59□□□□□ -0.55
ERCC2-207ENST00000586441 KLHL31Q9H511 634 aa11.59□□□□□ -0.55
ERCC2-207ENST00000586441 TNFRSF12AQ9NP84 129 aa11.59□□□□□ -0.55
ERCC2-207ENST00000586441 SEMA4BQ9NPR2 832 aaPredicted RBP11.59□□□□□ -0.55
ERCC2-207ENST00000586441 TMEM45AQ9NWC5 275 aa11.59□□□□□ -0.55
ERCC2-207ENST00000586441 LUZP4Q9P127 313 aa11.59□□□□□ -0.55
ERCC2-207ENST00000586441 ABI3Q9P2A4 366 aa11.59□□□□□ -0.55
ERCC2-207ENST00000586441 OPTCQ9UBM4 332 aa11.59□□□□□ -0.55
ERCC2-207ENST00000586441 PPIEQ9UNP9 301 aaKnown RBP11.59□□□□□ -0.55
ERCC2-207ENST00000586441 MRPS33Q9Y291 106 aaKnown RBP11.59□□□□□ -0.55
ERCC2-207ENST00000586441 CSAG2Q9Y5P2 127 aa11.59□□□□□ -0.55
ERCC2-207ENST00000586441 DNAJC15Q9Y5T4 150 aa11.59□□□□□ -0.55
ERCC2-207ENST00000586441 ZGRF1Q86YA3 2104 aa11.59□□□□□ -0.55
ERCC2-207ENST00000586441 USP9YO00507 2555 aaPredicted RBP11.58□□□□□ -0.56
ERCC2-207ENST00000586441 SVILO95425 2214 aa11.58□□□□□ -0.56
ERCC2-207ENST00000586441 OR5H15A6NDH6 313 aa11.58□□□□□ -0.56
ERCC2-207ENST00000586441 ZNF860A6NHJ4 632 aa11.58□□□□□ -0.56
ERCC2-207ENST00000586441 LRRC14BA6NHZ5 514 aa11.58□□□□□ -0.56
ERCC2-207ENST00000586441 BBIP1A8MTZ0 92 aa11.58□□□□□ -0.56
ERCC2-207ENST00000586441 E2F3O00716 465 aa11.58□□□□□ -0.56
ERCC2-207ENST00000586441 PIP5K1BO14986 540 aa11.58□□□□□ -0.56
ERCC2-207ENST00000586441 ERI3O43414 337 aaKnown RBP11.58□□□□□ -0.56
ERCC2-207ENST00000586441 B3GALT2O43825 422 aa11.58□□□□□ -0.56
ERCC2-207ENST00000586441 DNAJB6O75190 326 aa11.58□□□□□ -0.56
ERCC2-207ENST00000586441 FKBP6O75344 327 aa11.58□□□□□ -0.56
ERCC2-207ENST00000586441 SEC24DO94855 1032 aaPredicted RBP11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms