RNA–Protein interactions for RNA: ENST00000586417.5

ATG4D-204, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 2

Gene ATG4D, Length 1,752 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-204ENST00000586417 KCMF1Q9P0J7 381 aa19.29■□□□□ 0.68
ATG4D-204ENST00000586417 TMEM9Q9P0T7 183 aa19.29■□□□□ 0.68
ATG4D-204ENST00000586417 CNOT11Q9UKZ1 510 aaKnown RBP19.29■□□□□ 0.68
ATG4D-204ENST00000586417 ATXN7L1Q9ULK2 861 aaPredicted RBP19.29■□□□□ 0.68
ATG4D-204ENST00000586417 ZSCAN9O15535 394 aaPredicted RBP19.29■□□□□ 0.68
ATG4D-204ENST00000586417 PCGF2P35227 344 aa19.29■□□□□ 0.68
ATG4D-204ENST00000586417 CHI3L1P36222 383 aaPredicted RBP19.29■□□□□ 0.68
ATG4D-204ENST00000586417 CRATP43155 626 aa19.29■□□□□ 0.68
ATG4D-204ENST00000586417 CASP9P55211 416 aa19.29■□□□□ 0.68
ATG4D-204ENST00000586417 VAC14Q08AM6 782 aa19.29■□□□□ 0.68
ATG4D-204ENST00000586417 HSPB3Q12988 150 aa19.29■□□□□ 0.68
ATG4D-204ENST00000586417 DEFB134Q4QY38 66 aa19.29■□□□□ 0.68
ATG4D-204ENST00000586417 SAXO2Q658L1 398 aa19.29■□□□□ 0.68
ATG4D-204ENST00000586417 ANGPTL8Q6UXH0 198 aa19.29■□□□□ 0.68
ATG4D-204ENST00000586417 FAM92BQ6ZTR7 304 aa19.29■□□□□ 0.68
ATG4D-204ENST00000586417 TMPRSS9Q7Z410 1059 aa19.29■□□□□ 0.68
ATG4D-204ENST00000586417 RNF130Q86XS8 419 aa19.29■□□□□ 0.68
ATG4D-204ENST00000586417 CSNK1A1LQ8N752 337 aa19.29■□□□□ 0.68
ATG4D-204ENST00000586417 MAL2Q969L2 176 aa19.29■□□□□ 0.68
ATG4D-204ENST00000586417 NEURL3Q96EH8 262 aa19.29■□□□□ 0.68
ATG4D-204ENST00000586417 CNRIP1Q96F85 164 aaPredicted RBP19.29■□□□□ 0.68
ATG4D-204ENST00000586417 CENPNQ96H22 339 aaPredicted RBP19.29■□□□□ 0.68
ATG4D-204ENST00000586417 TGM7Q96PF1 710 aa19.29■□□□□ 0.68
ATG4D-204ENST00000586417 MAP3K3Q99759 626 aa19.29■□□□□ 0.68
ATG4D-204ENST00000586417 NUDT22Q9BRQ3 303 aa19.29■□□□□ 0.68
ATG4D-204ENST00000586417 NLNQ9BYT8 704 aa19.29■□□□□ 0.68
ATG4D-204ENST00000586417 ASPSCR1Q9BZE9 553 aa19.29■□□□□ 0.68
ATG4D-204ENST00000586417 LRCH1Q9Y2L9 728 aa19.29■□□□□ 0.68
ATG4D-204ENST00000586417 SCN3AQ9NY46 2000 aa19.28■□□□□ 0.68
ATG4D-204ENST00000586417 SLC9B1P1A6NJY1 282 aa19.28■□□□□ 0.68
ATG4D-204ENST00000586417 MYO1GB0I1T2 1018 aa19.28■□□□□ 0.68
ATG4D-204ENST00000586417 B4GALT2O60909 372 aa19.28■□□□□ 0.68
ATG4D-204ENST00000586417 KRT75O95678 551 aa19.28■□□□□ 0.68
ATG4D-204ENST00000586417 EIF2S1P05198 315 aaKnown RBP19.28■□□□□ 0.68
ATG4D-204ENST00000586417 RPSAP08865 295 aaKnown RBP19.28■□□□□ 0.68
ATG4D-204ENST00000586417 ALOX12P18054 663 aa19.28■□□□□ 0.68
ATG4D-204ENST00000586417 KDELR2P33947 212 aa19.28■□□□□ 0.68
ATG4D-204ENST00000586417 DUSP3P51452 185 aaPredicted RBP19.28■□□□□ 0.68
ATG4D-204ENST00000586417 GPLD1P80108 840 aa19.28■□□□□ 0.68
ATG4D-204ENST00000586417 CHRNB3Q05901 458 aa19.28■□□□□ 0.68
ATG4D-204ENST00000586417 RUNX2Q13950 521 aa19.28■□□□□ 0.68
ATG4D-204ENST00000586417 SWT1Q5T5J6 900 aaKnown RBP19.28■□□□□ 0.68
ATG4D-204ENST00000586417 ABHD13Q7L211 337 aa19.28■□□□□ 0.68
ATG4D-204ENST00000586417 EPHX4Q8IUS5 362 aa19.28■□□□□ 0.68
ATG4D-204ENST00000586417 EID3Q8N140 333 aa19.28■□□□□ 0.68
ATG4D-204ENST00000586417 POP5Q969H6 163 aaKnown RBP19.28■□□□□ 0.68
ATG4D-204ENST00000586417 SLC47A1Q96FL8 570 aa19.28■□□□□ 0.68
ATG4D-204ENST00000586417 CIB1Q99828 191 aa19.28■□□□□ 0.68
ATG4D-204ENST00000586417 COQ10BQ9H8M1 238 aa19.28■□□□□ 0.68
ATG4D-204ENST00000586417 KLHL3Q9UH77 587 aa19.28■□□□□ 0.68
ATG4D-204ENST00000586417 MAP4K5Q9Y4K4 846 aa19.28■□□□□ 0.68
ATG4D-204ENST00000586417 SNX8Q9Y5X2 465 aa19.28■□□□□ 0.68
ATG4D-204ENST00000586417 CEP250Q9BV73 2442 aa19.27■□□□□ 0.68
ATG4D-204ENST00000586417 DUX1O43812 170 aa19.27■□□□□ 0.68
ATG4D-204ENST00000586417 FOXD2O60548 495 aaPredicted RBP19.27■□□□□ 0.68
ATG4D-204ENST00000586417 DNAJB6O75190 326 aa19.27■□□□□ 0.68
ATG4D-204ENST00000586417 RPLP0P05388 317 aaKnown RBP19.27■□□□□ 0.68
ATG4D-204ENST00000586417 NR2F6P10588 404 aa19.27■□□□□ 0.68
ATG4D-204ENST00000586417 ACP1P24666 158 aa19.27■□□□□ 0.68
ATG4D-204ENST00000586417 CRYBA2P53672 197 aa19.27■□□□□ 0.68
ATG4D-204ENST00000586417 VSX2P58304 361 aaPredicted RBP19.27■□□□□ 0.68
ATG4D-204ENST00000586417 DUSP2Q05923 314 aa19.27■□□□□ 0.68
ATG4D-204ENST00000586417 CEBPEQ15744 281 aa19.27■□□□□ 0.68
ATG4D-204ENST00000586417 PRSS41Q7RTY9 318 aa19.27■□□□□ 0.68
ATG4D-204ENST00000586417 ARHGEF39Q8N4T4 335 aa19.27■□□□□ 0.68
ATG4D-204ENST00000586417 ZNF655Q8N720 491 aaPredicted RBP19.27■□□□□ 0.68
ATG4D-204ENST00000586417 C11orf65Q8NCR3 313 aa19.27■□□□□ 0.68
ATG4D-204ENST00000586417 ICA1LQ8NDH6 482 aa19.27■□□□□ 0.68
ATG4D-204ENST00000586417 SUN3Q8TAQ9 357 aa19.27■□□□□ 0.68
ATG4D-204ENST00000586417 C10orf90Q96M02 699 aa19.27■□□□□ 0.68
ATG4D-204ENST00000586417 SLC29A1Q99808 456 aa19.27■□□□□ 0.68
ATG4D-204ENST00000586417 RAD21L1Q9H4I0 556 aa19.27■□□□□ 0.68
ATG4D-204ENST00000586417 TMEM38AQ9H6F2 299 aa19.27■□□□□ 0.68
ATG4D-204ENST00000586417 MAGIXQ9H6Y5 334 aa19.27■□□□□ 0.68
ATG4D-204ENST00000586417 FAF1Q9UNN5 650 aaPredicted RBP19.27■□□□□ 0.68
ATG4D-204ENST00000586417 AK5Q9Y6K8 562 aa19.27■□□□□ 0.68
ATG4D-204ENST00000586417 GCM2O75603 506 aaPredicted RBP19.27■□□□□ 0.67
ATG4D-204ENST00000586417 C9P02748 559 aa19.27■□□□□ 0.67
ATG4D-204ENST00000586417 CTSBP07858 339 aa19.27■□□□□ 0.67
ATG4D-204ENST00000586417 NTSP30990 170 aa19.27■□□□□ 0.67
ATG4D-204ENST00000586417 LIM2P55344 173 aa19.27■□□□□ 0.67
ATG4D-204ENST00000586417 TNFRSF17Q02223 184 aa19.27■□□□□ 0.67
ATG4D-204ENST00000586417 EEF1A2Q05639 463 aaKnown RBP19.27■□□□□ 0.67
ATG4D-204ENST00000586417 DEFB110Q30KQ9 67 aa19.27■□□□□ 0.67
ATG4D-204ENST00000586417 ZNF750Q32MQ0 723 aa19.27■□□□□ 0.67
ATG4D-204ENST00000586417 LRRC23Q53EV4 343 aaPredicted RBP19.27■□□□□ 0.67
ATG4D-204ENST00000586417 GCNT6Q5T4J0 391 aa19.27■□□□□ 0.67
ATG4D-204ENST00000586417 GALNT10Q86SR1 603 aa19.27■□□□□ 0.67
ATG4D-204ENST00000586417 PIP4P1Q86T03 277 aa19.27■□□□□ 0.67
ATG4D-204ENST00000586417 DNAJC22Q8N4W6 341 aa19.27■□□□□ 0.67
ATG4D-204ENST00000586417 PYURFQ96I23 114 aa19.27■□□□□ 0.67
ATG4D-204ENST00000586417 BTBD9Q96Q07 612 aa19.27■□□□□ 0.67
ATG4D-204ENST00000586417 SYNDIG1Q9H7V2 258 aa19.27■□□□□ 0.67
ATG4D-204ENST00000586417 EPHA6Q9UF33 1036 aa19.27■□□□□ 0.67
ATG4D-204ENST00000586417 PHF11Q9UIL8 331 aa19.27■□□□□ 0.67
ATG4D-204ENST00000586417 DAPP1Q9UN19 280 aa19.27■□□□□ 0.67
ATG4D-204ENST00000586417 SAMD4AQ9UPU9 718 aaKnown RBP19.27■□□□□ 0.67
ATG4D-204ENST00000586417 A0A1W2PS29 197 aa19.26■□□□□ 0.67
ATG4D-204ENST00000586417 B3GALT2O43825 422 aa19.26■□□□□ 0.67
ATG4D-204ENST00000586417 ERAL1O75616 437 aaKnown RBP19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms