RNA–Protein interactions for RNA: ENST00000585540.1

PRKCSH-202, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 3

Gene PRKCSH, Length 501 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-202ENST00000585540 NUBPLQ8TB37 319 aa12.89□□□□□ -0.35
PRKCSH-202ENST00000585540 RAB3IL1Q8TBN0 382 aa12.89□□□□□ -0.35
PRKCSH-202ENST00000585540 ZNF764Q96H86 408 aaPredicted RBP12.89□□□□□ -0.35
PRKCSH-202ENST00000585540 FBXL20Q96IG2 436 aa12.89□□□□□ -0.35
PRKCSH-202ENST00000585540 HBEGFQ99075 208 aa12.89□□□□□ -0.35
PRKCSH-202ENST00000585540 MESP1Q9BRJ9 268 aa12.89□□□□□ -0.35
PRKCSH-202ENST00000585540 EPN3Q9H201 632 aa12.89□□□□□ -0.35
PRKCSH-202ENST00000585540 TRIM45Q9H8W5 580 aaPredicted RBP12.89□□□□□ -0.35
PRKCSH-202ENST00000585540 GIMAP4Q9NUV9 329 aa12.89□□□□□ -0.35
PRKCSH-202ENST00000585540 TIMM22Q9Y584 194 aa12.89□□□□□ -0.35
PRKCSH-202ENST00000585540 PIEZO2Q9H5I5 2752 aa12.88□□□□□ -0.35
PRKCSH-202ENST00000585540 TRBV11-1A0A0K0K1C0 115 aa12.88□□□□□ -0.35
PRKCSH-202ENST00000585540 GNG14A0A1W2PPG7 69 aa12.88□□□□□ -0.35
PRKCSH-202ENST00000585540 OR2W5A6NFC9 320 aa12.88□□□□□ -0.35
PRKCSH-202ENST00000585540 TTLL8A6PVC2 850 aa12.88□□□□□ -0.35
PRKCSH-202ENST00000585540 TGFBR3LH3BV60 316 aa12.88□□□□□ -0.35
PRKCSH-202ENST00000585540 OR10H2O60403 315 aa12.88□□□□□ -0.35
PRKCSH-202ENST00000585540 PLA2G2AP14555 144 aa12.88□□□□□ -0.35
PRKCSH-202ENST00000585540 PCSK2P16519 638 aa12.88□□□□□ -0.35
PRKCSH-202ENST00000585540 TRHRP34981 398 aaPredicted RBP12.88□□□□□ -0.35
PRKCSH-202ENST00000585540 CD97P48960 835 aa12.88□□□□□ -0.35
PRKCSH-202ENST00000585540 TNFSF10P50591 281 aa12.88□□□□□ -0.35
PRKCSH-202ENST00000585540 MLF1P58340 268 aa12.88□□□□□ -0.35
PRKCSH-202ENST00000585540 TLE1Q04724 770 aa12.88□□□□□ -0.35
PRKCSH-202ENST00000585540 CHI3L2Q15782 390 aa12.88□□□□□ -0.35
PRKCSH-202ENST00000585540 NADK2Q4G0N4 442 aa12.88□□□□□ -0.35
PRKCSH-202ENST00000585540 ARL13AQ5H913 290 aaPredicted RBP12.88□□□□□ -0.35
PRKCSH-202ENST00000585540 C18orf63Q68DL7 685 aa12.88□□□□□ -0.35
PRKCSH-202ENST00000585540 SLC48A1Q6P1K1 146 aa12.88□□□□□ -0.35
PRKCSH-202ENST00000585540 HSDL2Q6YN16 418 aa12.88□□□□□ -0.35
PRKCSH-202ENST00000585540 LINC00696Q6ZRV3 163 aa12.88□□□□□ -0.35
PRKCSH-202ENST00000585540 CLNKQ7Z7G1 428 aa12.88□□□□□ -0.35
PRKCSH-202ENST00000585540 ATCAYQ86WG3 371 aa12.88□□□□□ -0.35
PRKCSH-202ENST00000585540 SLC2A12Q8TD20 617 aa12.88□□□□□ -0.35
PRKCSH-202ENST00000585540 PTPMT1Q8WUK0 201 aaPredicted RBP12.88□□□□□ -0.35
PRKCSH-202ENST00000585540 NCLNQ969V3 563 aa12.88□□□□□ -0.35
PRKCSH-202ENST00000585540 ERP27Q96DN0 273 aa12.88□□□□□ -0.35
PRKCSH-202ENST00000585540 PAIP2Q9BPZ3 127 aaKnown RBP12.88□□□□□ -0.35
PRKCSH-202ENST00000585540 UTP23Q9BRU9 249 aaKnown RBP12.88□□□□□ -0.35
PRKCSH-202ENST00000585540 AGPAT4Q9NRZ5 378 aa12.88□□□□□ -0.35
PRKCSH-202ENST00000585540 STMN3Q9NZ72 180 aa12.88□□□□□ -0.35
PRKCSH-202ENST00000585540 CFL2Q9Y281 166 aa12.88□□□□□ -0.35
PRKCSH-202ENST00000585540 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.88□□□□□ -0.35
PRKCSH-202ENST00000585540 PCDHGA10Q9Y5H3 936 aa12.88□□□□□ -0.35
PRKCSH-202ENST00000585540 GABRR3A8MPY1 467 aa12.87□□□□□ -0.35
PRKCSH-202ENST00000585540 A8MUI8 341 aa12.87□□□□□ -0.35
PRKCSH-202ENST00000585540 MASP2O00187 686 aa12.87□□□□□ -0.35
PRKCSH-202ENST00000585540 ATP1B1P05026 303 aa12.87□□□□□ -0.35
PRKCSH-202ENST00000585540 IFI6P09912 130 aa12.87□□□□□ -0.35
PRKCSH-202ENST00000585540 CSNK2A2P19784 350 aaPredicted RBP12.87□□□□□ -0.35
PRKCSH-202ENST00000585540 BGNP21810 368 aa12.87□□□□□ -0.35
PRKCSH-202ENST00000585540 MAPK1P28482 360 aa12.87□□□□□ -0.35
PRKCSH-202ENST00000585540 PSPHP78330 225 aa12.87□□□□□ -0.35
PRKCSH-202ENST00000585540 HMGCS1Q01581 520 aa12.87□□□□□ -0.35
PRKCSH-202ENST00000585540 SPDYAQ5MJ70 313 aa12.87□□□□□ -0.35
PRKCSH-202ENST00000585540 HHATQ5VTY9 493 aa12.87□□□□□ -0.35
PRKCSH-202ENST00000585540 CLEC6AQ6EIG7 209 aa12.87□□□□□ -0.35
PRKCSH-202ENST00000585540 CRLF3Q8IUI8 442 aa12.87□□□□□ -0.35
PRKCSH-202ENST00000585540 LRRC34Q8IZ02 419 aa12.87□□□□□ -0.35
PRKCSH-202ENST00000585540 TMEM178AQ8NBL3 297 aa12.87□□□□□ -0.35
PRKCSH-202ENST00000585540 FAM98AQ8NCA5 519 aaKnown RBP12.87□□□□□ -0.35
PRKCSH-202ENST00000585540 CPT1CQ8TCG5 803 aa12.87□□□□□ -0.35
PRKCSH-202ENST00000585540 TM4SF18Q96CE8 201 aa12.87□□□□□ -0.35
PRKCSH-202ENST00000585540 FCRL1Q96LA6 429 aa12.87□□□□□ -0.35
PRKCSH-202ENST00000585540 PPP3R2Q96LZ3 170 aa12.87□□□□□ -0.35
PRKCSH-202ENST00000585540 MYNNQ9NPC7 610 aa12.87□□□□□ -0.35
PRKCSH-202ENST00000585540 C1orf109Q9NX04 203 aa12.87□□□□□ -0.35
PRKCSH-202ENST00000585540 TEX10Q9NXF1 929 aaPredicted RBP12.87□□□□□ -0.35
PRKCSH-202ENST00000585540 NKIRAS1Q9NYS0 192 aa12.87□□□□□ -0.35
PRKCSH-202ENST00000585540 YARS2Q9Y2Z4 477 aaKnown RBP12.87□□□□□ -0.35
PRKCSH-202ENST00000585540 FIS1Q9Y3D6 152 aa12.87□□□□□ -0.35
PRKCSH-202ENST00000585540 TRAF6Q9Y4K3 522 aa12.87□□□□□ -0.35
PRKCSH-202ENST00000585540 ZNF780BQ9Y6R6 833 aa12.87□□□□□ -0.35
PRKCSH-202ENST00000585540 NBEAQ8NFP9 2946 aa12.86□□□□□ -0.35
PRKCSH-202ENST00000585540 HMGB1P1B2RPK0 211 aaPredicted RBP12.86□□□□□ -0.35
PRKCSH-202ENST00000585540 TMEM233B4DJY2 109 aa12.86□□□□□ -0.35
PRKCSH-202ENST00000585540 ITM2AO43736 263 aa12.86□□□□□ -0.35
PRKCSH-202ENST00000585540 PRAMEF2O60811 474 aa12.86□□□□□ -0.35
PRKCSH-202ENST00000585540 LYPLA1O75608 230 aaPredicted RBP12.86□□□□□ -0.35
PRKCSH-202ENST00000585540 BCAS2O75934 225 aaPredicted RBP12.86□□□□□ -0.35
PRKCSH-202ENST00000585540 WDPCPO95876 746 aa12.86□□□□□ -0.35
PRKCSH-202ENST00000585540 IGKV3-11P04433 115 aa12.86□□□□□ -0.35
PRKCSH-202ENST00000585540 CELA2AP08217 269 aa12.86□□□□□ -0.35
PRKCSH-202ENST00000585540 CPMP14384 443 aa12.86□□□□□ -0.35
PRKCSH-202ENST00000585540 CD46P15529 392 aa12.86□□□□□ -0.35
PRKCSH-202ENST00000585540 CHN1P15882 459 aa12.86□□□□□ -0.35
PRKCSH-202ENST00000585540 PORP16435 677 aaPredicted RBP12.86□□□□□ -0.35
PRKCSH-202ENST00000585540 SERPINB3P29508 390 aa12.86□□□□□ -0.35
PRKCSH-202ENST00000585540 RPL3P39023 403 aaKnown RBP12.86□□□□□ -0.35
PRKCSH-202ENST00000585540 ASMTP46597 345 aa12.86□□□□□ -0.35
PRKCSH-202ENST00000585540 CYB561P49447 251 aa12.86□□□□□ -0.35
PRKCSH-202ENST00000585540 MAD2L1Q13257 205 aaPredicted RBP12.86□□□□□ -0.35
PRKCSH-202ENST00000585540 CEBPEQ15744 281 aa12.86□□□□□ -0.35
PRKCSH-202ENST00000585540 SMU1Q2TAY7 513 aa12.86□□□□□ -0.35
PRKCSH-202ENST00000585540 SH2D4BQ5SQS7 431 aa12.86□□□□□ -0.35
PRKCSH-202ENST00000585540 SCIMPQ6UWF3 145 aa12.86□□□□□ -0.35
PRKCSH-202ENST00000585540 GALNT12Q8IXK2 581 aa12.86□□□□□ -0.35
PRKCSH-202ENST00000585540 BEST3Q8N1M1 668 aa12.86□□□□□ -0.35
PRKCSH-202ENST00000585540 SLC15A4Q8N697 577 aa12.86□□□□□ -0.35
PRKCSH-202ENST00000585540 Q8NA96 180 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms