RNA–Protein interactions for RNA: ENST00000585121.5

SS18-225, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-225ENST00000585121 C16orf47Q6ZP98 133 aaPredicted RBP11.49□□□□□ -0.57
SS18-225ENST00000585121 SLC29A4Q7RTT9 530 aa11.49□□□□□ -0.57
SS18-225ENST00000585121 ZNF227Q86WZ6 799 aa11.49□□□□□ -0.57
SS18-225ENST00000585121 SPPL2CQ8IUH8 684 aa11.49□□□□□ -0.57
SS18-225ENST00000585121 SIAH3Q8IW03 269 aa11.49□□□□□ -0.57
SS18-225ENST00000585121 EID3Q8N140 333 aa11.49□□□□□ -0.57
SS18-225ENST00000585121 ZNF321PQ8N8H1 164 aa11.49□□□□□ -0.57
SS18-225ENST00000585121 PSD4Q8NDX1 1056 aa11.49□□□□□ -0.57
SS18-225ENST00000585121 ZNF721Q8TF20 911 aa11.49□□□□□ -0.57
SS18-225ENST00000585121 SREK1Q8WXA9 508 aaKnown RBP11.49□□□□□ -0.57
SS18-225ENST00000585121 SGCZQ96LD1 299 aa11.49□□□□□ -0.57
SS18-225ENST00000585121 RASL10BQ96S79 203 aa11.49□□□□□ -0.57
SS18-225ENST00000585121 CNPPD1Q9BV87 410 aa11.49□□□□□ -0.57
SS18-225ENST00000585121 ZNF717Q9BY31 904 aaPredicted RBP11.49□□□□□ -0.57
SS18-225ENST00000585121 TXLNGYQ9BZA5 131 aa11.49□□□□□ -0.57
SS18-225ENST00000585121 PPCSQ9HAB8 311 aa11.49□□□□□ -0.57
SS18-225ENST00000585121 BRF2Q9HAW0 419 aa11.49□□□□□ -0.57
SS18-225ENST00000585121 RYDENQ9NUL5 291 aaKnown RBP11.49□□□□□ -0.57
SS18-225ENST00000585121 TMEM216Q9P0N5 145 aa11.49□□□□□ -0.57
SS18-225ENST00000585121 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.49□□□□□ -0.57
SS18-225ENST00000585121 TBK1Q9UHD2 729 aa11.49□□□□□ -0.57
SS18-225ENST00000585121 DCDC2Q9UHG0 476 aa11.49□□□□□ -0.57
SS18-225ENST00000585121 STK38LQ9Y2H1 464 aa11.49□□□□□ -0.57
SS18-225ENST00000585121 V9GYY5 206 aaPredicted RBP11.49□□□□□ -0.57
SS18-225ENST00000585121 NOTCH2Q04721 2471 aa11.48□□□□□ -0.57
SS18-225ENST00000585121 A0A1W2PR48 441 aa11.48□□□□□ -0.57
SS18-225ENST00000585121 CCDC151A5D8V7 595 aa11.48□□□□□ -0.57
SS18-225ENST00000585121 TMEM200CA6NKL6 621 aa11.48□□□□□ -0.57
SS18-225ENST00000585121 CYSRT1A8MQ03 144 aa11.48□□□□□ -0.57
SS18-225ENST00000585121 GOLGA8RI6L899 631 aa11.48□□□□□ -0.57
SS18-225ENST00000585121 PRKRAO75569 313 aaKnown RBP11.48□□□□□ -0.57
SS18-225ENST00000585121 OR6B1O95007 311 aa11.48□□□□□ -0.57
SS18-225ENST00000585121 AIFM1O95831 613 aa11.48□□□□□ -0.57
SS18-225ENST00000585121 KRT6AP02538 564 aa11.48□□□□□ -0.57
SS18-225ENST00000585121 GBAP04062 536 aa11.48□□□□□ -0.57
SS18-225ENST00000585121 KRT6BP04259 564 aa11.48□□□□□ -0.57
SS18-225ENST00000585121 SBK3P0C264 359 aa11.48□□□□□ -0.57
SS18-225ENST00000585121 SLC35E2P0CK97 266 aa11.48□□□□□ -0.57
SS18-225ENST00000585121 PYGBP11216 843 aa11.48□□□□□ -0.57
SS18-225ENST00000585121 TSPAN8P19075 237 aa11.48□□□□□ -0.57
SS18-225ENST00000585121 HMOX2P30519 316 aa11.48□□□□□ -0.57
SS18-225ENST00000585121 GALNSP34059 522 aa11.48□□□□□ -0.57
SS18-225ENST00000585121 HSD17B3P37058 310 aa11.48□□□□□ -0.57
SS18-225ENST00000585121 SOX3P41225 446 aa11.48□□□□□ -0.57
SS18-225ENST00000585121 KRT6CP48668 564 aa11.48□□□□□ -0.57
SS18-225ENST00000585121 PLGLB1Q02325 96 aa11.48□□□□□ -0.57
SS18-225ENST00000585121 ZNF267Q14586 743 aaPredicted RBP11.48□□□□□ -0.57
SS18-225ENST00000585121 MPEG1Q2M385 716 aa11.48□□□□□ -0.57
SS18-225ENST00000585121 PIGGQ5H8A4 983 aa11.48□□□□□ -0.57
SS18-225ENST00000585121 ZNF678Q5SXM1 525 aa11.48□□□□□ -0.57
SS18-225ENST00000585121 HIST2H2BCQ6DN03 193 aa11.48□□□□□ -0.57
SS18-225ENST00000585121 WDR93Q6P2C0 686 aa11.48□□□□□ -0.57
SS18-225ENST00000585121 RPTNQ6XPR3 784 aa11.48□□□□□ -0.57
SS18-225ENST00000585121 RNF111Q6ZNA4 994 aa11.48□□□□□ -0.57
SS18-225ENST00000585121 RTL4Q6ZR62 310 aa11.48□□□□□ -0.57
SS18-225ENST00000585121 RPS27LQ71UM5 84 aaKnown RBP11.48□□□□□ -0.57
SS18-225ENST00000585121 MDGA2Q7Z553 956 aa11.48□□□□□ -0.57
SS18-225ENST00000585121 METTL4Q8N3J2 472 aa11.48□□□□□ -0.57
SS18-225ENST00000585121 TMEM151AQ8N4L1 468 aa11.48□□□□□ -0.57
SS18-225ENST00000585121 NUBPLQ8TB37 319 aa11.48□□□□□ -0.57
SS18-225ENST00000585121 SLC22A8Q8TCC7 542 aa11.48□□□□□ -0.57
SS18-225ENST00000585121 UBLCP1Q8WVY7 318 aaPredicted RBP11.48□□□□□ -0.57
SS18-225ENST00000585121 RIT1Q92963 219 aa11.48□□□□□ -0.57
SS18-225ENST00000585121 FBXL20Q96IG2 436 aa11.48□□□□□ -0.57
SS18-225ENST00000585121 MRPL1Q9BYD6 325 aaKnown RBP11.48□□□□□ -0.57
SS18-225ENST00000585121 ANKZF1Q9H8Y5 726 aa11.48□□□□□ -0.57
SS18-225ENST00000585121 OR6C76A6NM76 312 aa11.47□□□□□ -0.57
SS18-225ENST00000585121 ACOT7O00154 380 aa11.47□□□□□ -0.57
SS18-225ENST00000585121 PRRG2O14669 202 aa11.47□□□□□ -0.57
SS18-225ENST00000585121 DLX3O60479 287 aa11.47□□□□□ -0.57
SS18-225ENST00000585121 OR4F21O95013 312 aa11.47□□□□□ -0.57
SS18-225ENST00000585121 PDYNP01213 254 aa11.47□□□□□ -0.57
SS18-225ENST00000585121 P04436 131 aa11.47□□□□□ -0.57
SS18-225ENST00000585121 IMPDH1P20839 514 aa11.47□□□□□ -0.57
SS18-225ENST00000585121 MAPK12P53778 367 aa11.47□□□□□ -0.57
SS18-225ENST00000585121 PRKAA2P54646 552 aa11.47□□□□□ -0.57
SS18-225ENST00000585121 GPR85P60893 370 aa11.47□□□□□ -0.57
SS18-225ENST00000585121 ERVK-8P63133 956 aa11.47□□□□□ -0.57
SS18-225ENST00000585121 ASPHQ12797 758 aa11.47□□□□□ -0.57
SS18-225ENST00000585121 C3AR1Q16581 482 aa11.47□□□□□ -0.57
SS18-225ENST00000585121 SPRED3Q2MJR0 410 aa11.47□□□□□ -0.57
SS18-225ENST00000585121 LETMD1Q6P1Q0 360 aa11.47□□□□□ -0.57
SS18-225ENST00000585121 PAOXQ6QHF9 649 aa11.47□□□□□ -0.57
SS18-225ENST00000585121 RGS9BPQ6ZS82 235 aa11.47□□□□□ -0.57
SS18-225ENST00000585121 GPRIN3Q6ZVF9 776 aa11.47□□□□□ -0.57
SS18-225ENST00000585121 GSPT2Q8IYD1 628 aaKnown RBP11.47□□□□□ -0.57
SS18-225ENST00000585121 SLC15A4Q8N697 577 aa11.47□□□□□ -0.57
SS18-225ENST00000585121 ZFP62Q8NB50 900 aaPredicted RBP11.47□□□□□ -0.57
SS18-225ENST00000585121 GOLM1Q8NBJ4 401 aa11.47□□□□□ -0.57
SS18-225ENST00000585121 OR4K14Q8NGD5 310 aa11.47□□□□□ -0.57
SS18-225ENST00000585121 C16orf52Q8NHV5 167 aa11.47□□□□□ -0.57
SS18-225ENST00000585121 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.47□□□□□ -0.576e-8■■■■□ 26.7
SS18-225ENST00000585121 CCDC126Q96EE4 140 aa11.47□□□□□ -0.57
SS18-225ENST00000585121 ZNF382Q96SR6 550 aa11.47□□□□□ -0.57
SS18-225ENST00000585121 PARD6BQ9BYG5 372 aa11.47□□□□□ -0.57
SS18-225ENST00000585121 RAB21Q9UL25 225 aa11.47□□□□□ -0.57
SS18-225ENST00000585121 PSME2Q9UL46 239 aa11.47□□□□□ -0.57
SS18-225ENST00000585121 ERVK-19Q9WJR5 959 aa11.47□□□□□ -0.57
SS18-225ENST00000585121 ZNF835Q9Y2P0 537 aa11.47□□□□□ -0.57
SS18-225ENST00000585121 PPP6CO00743 305 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms