RNA–Protein interactions for RNA: ENST00000584908.5

ERBB2-222, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best)

Gene ERBB2, Length 1,316 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-222ENST00000584908 HMGCS1Q01581 520 aa15.13■□□□□ 0.01
ERBB2-222ENST00000584908 IGFBP7Q16270 282 aa15.13■□□□□ 0.01
ERBB2-222ENST00000584908 SPRED3Q2MJR0 410 aa15.13■□□□□ 0.01
ERBB2-222ENST00000584908 SLC48A1Q6P1K1 146 aa15.13■□□□□ 0.01
ERBB2-222ENST00000584908 GALNT11Q8NCW6 608 aa15.13■□□□□ 0.01
ERBB2-222ENST00000584908 MDS2Q8NDY4 140 aa15.13■□□□□ 0.01
ERBB2-222ENST00000584908 SLC2A12Q8TD20 617 aa15.13■□□□□ 0.01
ERBB2-222ENST00000584908 ZNF721Q8TF20 911 aa15.13■□□□□ 0.01
ERBB2-222ENST00000584908 APIPQ96GX9 242 aa15.13■□□□□ 0.01
ERBB2-222ENST00000584908 UTP23Q9BRU9 249 aaKnown RBP15.13■□□□□ 0.01
ERBB2-222ENST00000584908 CCL27Q9Y4X3 112 aa15.13■□□□□ 0.01
ERBB2-222ENST00000584908 RELNP78509 3460 aa15.13■□□□□ 0.01
ERBB2-222ENST00000584908 AZIN1O14977 448 aa15.12■□□□□ 0.01
ERBB2-222ENST00000584908 TM9SF1O15321 606 aa15.12■□□□□ 0.01
ERBB2-222ENST00000584908 PRKNO60260 465 aaPredicted RBP15.12■□□□□ 0.01
ERBB2-222ENST00000584908 PRAMEF2O60811 474 aa15.12■□□□□ 0.01
ERBB2-222ENST00000584908 RSL1D1O76021 490 aaKnown RBP15.12■□□□□ 0.01
ERBB2-222ENST00000584908 DHRS4L1P0CG22 281 aa15.12■□□□□ 0.01
ERBB2-222ENST00000584908 PRPH2P23942 346 aa15.12■□□□□ 0.01
ERBB2-222ENST00000584908 TIA1P31483 386 aaKnown RBP eCLIP15.12■□□□□ 0.01
ERBB2-222ENST00000584908 GSTM5P46439 218 aa15.12■□□□□ 0.01
ERBB2-222ENST00000584908 ACSM2AQ08AH3 577 aa15.12■□□□□ 0.01
ERBB2-222ENST00000584908 ACSM2BQ68CK6 577 aa15.12■□□□□ 0.01
ERBB2-222ENST00000584908 HSDL2Q6YN16 418 aa15.12■□□□□ 0.01
ERBB2-222ENST00000584908 DGAT2L6Q6ZPD8 337 aa15.12■□□□□ 0.01
ERBB2-222ENST00000584908 CISD2Q8N5K1 135 aaKnown RBP15.12■□□□□ 0.01
ERBB2-222ENST00000584908 OR4K14Q8NGD5 310 aa15.12■□□□□ 0.01
ERBB2-222ENST00000584908 FAM76AQ8TAV0 307 aa15.12■□□□□ 0.01
ERBB2-222ENST00000584908 SREK1Q8WXA9 508 aaKnown RBP15.12■□□□□ 0.01
ERBB2-222ENST00000584908 SENP5Q96HI0 755 aaPredicted RBP15.12■□□□□ 0.01
ERBB2-222ENST00000584908 FBXL20Q96IG2 436 aa15.12■□□□□ 0.01
ERBB2-222ENST00000584908 ART5Q96L15 291 aa15.12■□□□□ 0.01
ERBB2-222ENST00000584908 OR8D2Q9GZM6 311 aa15.12■□□□□ 0.01
ERBB2-222ENST00000584908 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP15.12■□□□□ 0.012e-6■■□□□ 12.9
ERBB2-222ENST00000584908 ASF1BQ9NVP2 202 aa15.12■□□□□ 0.01
ERBB2-222ENST00000584908 NTNG1Q9Y2I2 539 aa15.12■□□□□ 0.01
ERBB2-222ENST00000584908 COPG1Q9Y678 874 aaKnown RBP15.12■□□□□ 0.01
ERBB2-222ENST00000584908 LRRK2Q5S007 2527 aa15.11■□□□□ 0.01
ERBB2-222ENST00000584908 USP9XQ93008 2570 aaPredicted RBP15.11■□□□□ 0.01
ERBB2-222ENST00000584908 PYCARD-AS1I3L0S3 204 aa15.11■□□□□ 0.01
ERBB2-222ENST00000584908 FCHO1O14526 889 aa15.11■□□□□ 0.01
ERBB2-222ENST00000584908 DYRK3O43781 588 aa15.11■□□□□ 0.01
ERBB2-222ENST00000584908 PCDH7O60245 1069 aa15.11■□□□□ 0.01
ERBB2-222ENST00000584908 CRCPO75575 148 aa15.11■□□□□ 0.01
ERBB2-222ENST00000584908 NEURL1O76050 574 aa15.11■□□□□ 0.01
ERBB2-222ENST00000584908 F10P00742 488 aa15.11■□□□□ 0.01
ERBB2-222ENST00000584908 TNNI3P19429 210 aa15.11■□□□□ 0.01
ERBB2-222ENST00000584908 PIK3R1P27986 724 aa15.11■□□□□ 0.01
ERBB2-222ENST00000584908 SERPINB3P29508 390 aa15.11■□□□□ 0.01
ERBB2-222ENST00000584908 SERPINB4P48594 390 aa15.11■□□□□ 0.01
ERBB2-222ENST00000584908 UGT3A2Q3SY77 523 aa15.11■□□□□ 0.01
ERBB2-222ENST00000584908 ARL13AQ5H913 290 aaPredicted RBP15.11■□□□□ 0.01
ERBB2-222ENST00000584908 ZNF468Q5VIY5 522 aaPredicted RBP15.11■□□□□ 0.01
ERBB2-222ENST00000584908 KANK2Q63ZY3 851 aa15.11■□□□□ 0.01
ERBB2-222ENST00000584908 CLEC6AQ6EIG7 209 aa15.11■□□□□ 0.01
ERBB2-222ENST00000584908 SCIMPQ6UWF3 145 aa15.11■□□□□ 0.01
ERBB2-222ENST00000584908 ZNF321PQ8N8H1 164 aa15.11■□□□□ 0.01
ERBB2-222ENST00000584908 SUN3Q8TAQ9 357 aa15.11■□□□□ 0.01
ERBB2-222ENST00000584908 PUM2Q8TB72 1066 aaKnown RBP eCLIP15.11■□□□□ 0.01
ERBB2-222ENST00000584908 PPWD1Q96BP3 646 aaKnown RBP15.11■□□□□ 0.01
ERBB2-222ENST00000584908 C19orf60Q96EN9 201 aa15.11■□□□□ 0.01
ERBB2-222ENST00000584908 SCMH1Q96GD3 660 aa15.11■□□□□ 0.01
ERBB2-222ENST00000584908 SIGLEC12Q96PQ1 595 aa15.11■□□□□ 0.01
ERBB2-222ENST00000584908 FAIM2Q9BWQ8 316 aa15.11■□□□□ 0.01
ERBB2-222ENST00000584908 SHCBP1LQ9BZQ2 653 aa15.11■□□□□ 0.01
ERBB2-222ENST00000584908 EML4Q9HC35 981 aaKnown RBP15.11■□□□□ 0.01
ERBB2-222ENST00000584908 RRAGDQ9NQL2 400 aaPredicted RBP15.11■□□□□ 0.01
ERBB2-222ENST00000584908 RYDENQ9NUL5 291 aaKnown RBP15.11■□□□□ 0.01
ERBB2-222ENST00000584908 MYOTQ9UBF9 498 aa15.11■□□□□ 0.01
ERBB2-222ENST00000584908 COPS7AQ9UBW8 275 aa15.11■□□□□ 0.01
ERBB2-222ENST00000584908 YARS2Q9Y2Z4 477 aaKnown RBP15.11■□□□□ 0.01
ERBB2-222ENST00000584908 ESPL1Q14674 2120 aa15.1■□□□□ 0.01
ERBB2-222ENST00000584908 POLEQ07864 2286 aa15.1■□□□□ 0.01
ERBB2-222ENST00000584908 BIRC5O15392 142 aa15.1■□□□□ 0.01
ERBB2-222ENST00000584908 ITGA10O75578 1167 aa15.1■□□□□ 0.01
ERBB2-222ENST00000584908 ZWINTO95229 277 aa15.1■□□□□ 0.01
ERBB2-222ENST00000584908 CHRNGP07510 517 aa15.1■□□□□ 0.01
ERBB2-222ENST00000584908 MYZAPP0CAP1 466 aa15.1■□□□□ 0.01
ERBB2-222ENST00000584908 CPMP14384 443 aa15.1■□□□□ 0.01
ERBB2-222ENST00000584908 DRD2P14416 443 aa15.1■□□□□ 0.01
ERBB2-222ENST00000584908 ARRB2P32121 409 aa15.1■□□□□ 0.01
ERBB2-222ENST00000584908 CYB561P49447 251 aa15.1■□□□□ 0.01
ERBB2-222ENST00000584908 HLCSP50747 726 aa15.1■□□□□ 0.01
ERBB2-222ENST00000584908 XKP51811 444 aa15.1■□□□□ 0.01
ERBB2-222ENST00000584908 RNF4P78317 190 aa15.1■□□□□ 0.01
ERBB2-222ENST00000584908 MPP2Q14168 576 aa15.1■□□□□ 0.01
ERBB2-222ENST00000584908 OR1C1Q15619 314 aa15.1■□□□□ 0.01
ERBB2-222ENST00000584908 ZNF766Q5HY98 468 aa15.1■□□□□ 0.01
ERBB2-222ENST00000584908 ZNF324BQ6AW86 544 aaPredicted RBP15.1■□□□□ 0.01
ERBB2-222ENST00000584908 ZCCHC23Q6ZST2 131 aa15.1■□□□□ 0.01
ERBB2-222ENST00000584908 ATCAYQ86WG3 371 aa15.1■□□□□ 0.01
ERBB2-222ENST00000584908 ZNF227Q86WZ6 799 aa15.1■□□□□ 0.01
ERBB2-222ENST00000584908 CLYBLQ8N0X4 340 aa15.1■□□□□ 0.01
ERBB2-222ENST00000584908 HORMAD2Q8N7B1 307 aa15.1■□□□□ 0.01
ERBB2-222ENST00000584908 NUBPLQ8TB37 319 aa15.1■□□□□ 0.01
ERBB2-222ENST00000584908 RIT1Q92963 219 aa15.1■□□□□ 0.01
ERBB2-222ENST00000584908 STMN4Q9H169 189 aaPredicted RBP15.1■□□□□ 0.01
ERBB2-222ENST00000584908 CENPHQ9H3R5 247 aa15.1■□□□□ 0.01
ERBB2-222ENST00000584908 TUBB1Q9H4B7 451 aa15.1■□□□□ 0.01
ERBB2-222ENST00000584908 CXorf21Q9HAI6 301 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms