RNA–Protein interactions for RNA: ENST00000584760.1

SREBF1-223, Transcript of sterol regulatory element binding transcription factor 1, human

TSL 2

Gene SREBF1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SREBF1-223	ENST00000584760	TLX1	P31314	330 aa	Predicted RBP	12.36	□□□□□ -0.43
SREBF1-223	ENST00000584760	PLIN5	Q00G26	463 aa		12.36	□□□□□ -0.43
SREBF1-223	ENST00000584760	SRSF11	Q05519	484 aa	Known RBP	12.36	□□□□□ -0.43
SREBF1-223	ENST00000584760	GALNT1	Q10472	559 aa	Predicted RBP	12.36	□□□□□ -0.43
SREBF1-223	ENST00000584760	LCP2	Q13094	533 aa		12.36	□□□□□ -0.43
SREBF1-223	ENST00000584760	OR52E8	Q6IFG1	317 aa		12.36	□□□□□ -0.43
SREBF1-223	ENST00000584760	ZYG11A	Q6WRX3	759 aa		12.36	□□□□□ -0.43
SREBF1-223	ENST00000584760	HSDL2	Q6YN16	418 aa		12.36	□□□□□ -0.43
SREBF1-223	ENST00000584760	DGAT2L6	Q6ZPD8	337 aa		12.36	□□□□□ -0.43
SREBF1-223	ENST00000584760	GPRIN3	Q6ZVF9	776 aa		12.36	□□□□□ -0.43
SREBF1-223	ENST00000584760	COMMD6	Q7Z4G1	85 aa		12.36	□□□□□ -0.43
SREBF1-223	ENST00000584760	GALNTL5	Q7Z4T8	443 aa		12.36	□□□□□ -0.43
SREBF1-223	ENST00000584760	CDYL2	Q8N8U2	506 aa		12.36	□□□□□ -0.43
SREBF1-223	ENST00000584760	C7orf57	Q8NEG2	295 aa		12.36	□□□□□ -0.43
SREBF1-223	ENST00000584760	OR8K3	Q8NH51	312 aa		12.36	□□□□□ -0.43
SREBF1-223	ENST00000584760	ZNF721	Q8TF20	911 aa		12.36	□□□□□ -0.43
SREBF1-223	ENST00000584760	SELENOM	Q8WWX9	145 aa		12.36	□□□□□ -0.43
SREBF1-223	ENST00000584760	DGAT2	Q96PD7	388 aa		12.36	□□□□□ -0.43
SREBF1-223	ENST00000584760	GSTO2	Q9H4Y5	243 aa		12.36	□□□□□ -0.43
SREBF1-223	ENST00000584760	MYOT	Q9UBF9	498 aa		12.36	□□□□□ -0.43
SREBF1-223	ENST00000584760	ITGB1BP2	Q9UKP3	347 aa		12.36	□□□□□ -0.43
SREBF1-223	ENST00000584760	SLC12A4	Q9UP95	1085 aa		12.36	□□□□□ -0.43
SREBF1-223	ENST00000584760	GLOD5	A6NK44	160 aa		12.35	□□□□□ -0.43
SREBF1-223	ENST00000584760	WASHC1	A8K0Z3	465 aa		12.35	□□□□□ -0.43
SREBF1-223	ENST00000584760	HRK	O00198	91 aa		12.35	□□□□□ -0.43
SREBF1-223	ENST00000584760	MANBA	O00462	879 aa		12.35	□□□□□ -0.43
SREBF1-223	ENST00000584760	PLIN3	O60664	434 aa		12.35	□□□□□ -0.43
SREBF1-223	ENST00000584760	OR2J2	O76002	312 aa		12.35	□□□□□ -0.43
SREBF1-223	ENST00000584760	SLU7	O95391	586 aa	Known RBP	12.35	□□□□□ -0.43
SREBF1-223	ENST00000584760	GPR75	O95800	540 aa		12.35	□□□□□ -0.43
SREBF1-223	ENST00000584760	MLYCD	O95822	493 aa		12.35	□□□□□ -0.43
SREBF1-223	ENST00000584760	KLK1	P06870	262 aa		12.35	□□□□□ -0.43
SREBF1-223	ENST00000584760	SNRPB2	P08579	225 aa	Known RBP	12.35	□□□□□ -0.43
SREBF1-223	ENST00000584760	STS	P08842	583 aa		12.35	□□□□□ -0.43
SREBF1-223	ENST00000584760	NUDT17	P0C025	328 aa		12.35	□□□□□ -0.43
SREBF1-223	ENST00000584760	MYL2	P10916	166 aa		12.35	□□□□□ -0.43
SREBF1-223	ENST00000584760	HSD3B1	P14060	373 aa		12.35	□□□□□ -0.43
SREBF1-223	ENST00000584760	COX7A2	P14406	83 aa		12.35	□□□□□ -0.43
SREBF1-223	ENST00000584760	ALOX15	P16050	662 aa	Predicted RBP	12.35	□□□□□ -0.43
SREBF1-223	ENST00000584760	KRT15	P19012	456 aa		12.35	□□□□□ -0.43
SREBF1-223	ENST00000584760	TNNI3	P19429	210 aa		12.35	□□□□□ -0.43
SREBF1-223	ENST00000584760	HSD3B2	P26439	372 aa		12.35	□□□□□ -0.43
SREBF1-223	ENST00000584760	CRHR1	P34998	444 aa		12.35	□□□□□ -0.43
SREBF1-223	ENST00000584760	HK2	P52789	917 aa		12.35	□□□□□ -0.43
SREBF1-223	ENST00000584760	KCNK10	P57789	538 aa		12.35	□□□□□ -0.43
SREBF1-223	ENST00000584760	RNF4	P78317	190 aa		12.35	□□□□□ -0.43
SREBF1-223	ENST00000584760	TBL3	Q12788	808 aa	Known RBP	12.35	□□□□□ -0.43
SREBF1-223	ENST00000584760	BIK	Q13323	160 aa		12.35	□□□□□ -0.43
SREBF1-223	ENST00000584760	SPRED3	Q2MJR0	410 aa		12.35	□□□□□ -0.43
SREBF1-223	ENST00000584760	SLC25A25	Q6KCM7	469 aa		12.35	□□□□□ -0.43
SREBF1-223	ENST00000584760	PAGE2	Q7Z2X7	111 aa		12.35	□□□□□ -0.43
SREBF1-223	ENST00000584760	ST13P4	Q8IZP2	240 aa	Predicted RBP	12.35	□□□□□ -0.43
SREBF1-223	ENST00000584760	CYP4Z2P	Q8N1L4	340 aa		12.35	□□□□□ -0.43
SREBF1-223	ENST00000584760	OR2W6P	Q8NHA6	318 aa		12.35	□□□□□ -0.43
SREBF1-223	ENST00000584760	AGAP11	Q8TF27	550 aa		12.35	□□□□□ -0.43
SREBF1-223	ENST00000584760	AEN	Q8WTP8	325 aa	Known RBP	12.35	□□□□□ -0.43
SREBF1-223	ENST00000584760	UCN3	Q969E3	161 aa		12.35	□□□□□ -0.43
SREBF1-223	ENST00000584760	PPWD1	Q96BP3	646 aa	Known RBP	12.35	□□□□□ -0.43
SREBF1-223	ENST00000584760	CCDC126	Q96EE4	140 aa		12.35	□□□□□ -0.43
SREBF1-223	ENST00000584760	FBXL20	Q96IG2	436 aa		12.35	□□□□□ -0.43
SREBF1-223	ENST00000584760	PELO	Q9BRX2	385 aa	Known RBP	12.35	□□□□□ -0.43
SREBF1-223	ENST00000584760	LIN28A	Q9H9Z2	209 aa	Known RBP	12.35	□□□□□ -0.43
SREBF1-223	ENST00000584760	WDR41	Q9HAD4	459 aa		12.35	□□□□□ -0.43
SREBF1-223	ENST00000584760	AHSP	Q9NZD4	102 aa		12.35	□□□□□ -0.43
SREBF1-223	ENST00000584760	COPS7A	Q9UBW8	275 aa		12.35	□□□□□ -0.43
SREBF1-223	ENST00000584760	STK38L	Q9Y2H1	464 aa		12.35	□□□□□ -0.43
SREBF1-223	ENST00000584760	YARS2	Q9Y2Z4	477 aa	Known RBP	12.35	□□□□□ -0.43
SREBF1-223	ENST00000584760	POLQ	O75417	2590 aa		12.34	□□□□□ -0.43
SREBF1-223	ENST00000584760	APC	P25054	2843 aa		12.34	□□□□□ -0.43
SREBF1-223	ENST00000584760	GTF3C1	Q12789	2109 aa		12.34	□□□□□ -0.43
SREBF1-223	ENST00000584760		A0A1W2PS29	197 aa		12.34	□□□□□ -0.43
SREBF1-223	ENST00000584760	PGRMC2	O15173	223 aa		12.34	□□□□□ -0.43
SREBF1-223	ENST00000584760	WISP2	O76076	250 aa		12.34	□□□□□ -0.43
SREBF1-223	ENST00000584760	KRT6A	P02538	564 aa		12.34	□□□□□ -0.43
SREBF1-223	ENST00000584760	KRT6B	P04259	564 aa		12.34	□□□□□ -0.43
SREBF1-223	ENST00000584760	ENO1	P06733	434 aa	Known RBP	12.34	□□□□□ -0.43
SREBF1-223	ENST00000584760	KRT4	P19013	534 aa		12.34	□□□□□ -0.43
SREBF1-223	ENST00000584760	KRT6C	P48668	564 aa		12.34	□□□□□ -0.43
SREBF1-223	ENST00000584760	HTR6	P50406	440 aa		12.34	□□□□□ -0.43
SREBF1-223	ENST00000584760	SSR4	P51571	173 aa		12.34	□□□□□ -0.43
SREBF1-223	ENST00000584760	PKNOX1	P55347	436 aa		12.34	□□□□□ -0.43
SREBF1-223	ENST00000584760	SLC18A2	Q05940	514 aa		12.34	□□□□□ -0.43
SREBF1-223	ENST00000584760	CSTF3	Q12996	717 aa	Known RBP	12.34	□□□□□ -0.43
SREBF1-223	ENST00000584760	MAPKAPK3	Q16644	382 aa		12.34	□□□□□ -0.43
SREBF1-223	ENST00000584760	CCDC153	Q494R4	210 aa		12.34	□□□□□ -0.43
SREBF1-223	ENST00000584760	NDUFAF5	Q5TEU4	345 aa		12.34	□□□□□ -0.43
SREBF1-223	ENST00000584760	WDR93	Q6P2C0	686 aa		12.34	□□□□□ -0.43
SREBF1-223	ENST00000584760	EMB	Q6PCB8	327 aa		12.34	□□□□□ -0.43
SREBF1-223	ENST00000584760	SIAH3	Q8IW03	269 aa		12.34	□□□□□ -0.43
SREBF1-223	ENST00000584760	C9orf40	Q8IXQ3	194 aa		12.34	□□□□□ -0.43
SREBF1-223	ENST00000584760	TMEM156	Q8N614	296 aa		12.34	□□□□□ -0.43
SREBF1-223	ENST00000584760	FAM98A	Q8NCA5	519 aa	Known RBP	12.34	□□□□□ -0.43
SREBF1-223	ENST00000584760	RDH11	Q8TC12	318 aa		12.34	□□□□□ -0.43
SREBF1-223	ENST00000584760	TMEM125	Q96AQ2	219 aa		12.34	□□□□□ -0.43
SREBF1-223	ENST00000584760	SENP5	Q96HI0	755 aa	Predicted RBP	12.34	□□□□□ -0.43
SREBF1-223	ENST00000584760	LURAP1	Q96LR2	239 aa		12.34	□□□□□ -0.43
SREBF1-223	ENST00000584760	RASL10B	Q96S79	203 aa		12.34	□□□□□ -0.43
SREBF1-223	ENST00000584760	C12orf65	Q9H3J6	166 aa	Known RBP	12.34	□□□□□ -0.43
SREBF1-223	ENST00000584760	KLF13	Q9Y2Y9	288 aa	Predicted RBP	12.34	□□□□□ -0.43
SREBF1-223	ENST00000584760	C2CD3	Q4AC94	2353 aa		12.34	□□□□□ -0.43

Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms