RNA–Protein interactions for RNA: ENST00000584083.5

SS18-224, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 663 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-224ENST00000584083 STK38LQ9Y2H1 464 aa18.97■□□□□ 0.63
SS18-224ENST00000584083 UTP20O75691 2785 aaKnown RBP18.97■□□□□ 0.63
SS18-224ENST00000584083 MYO7BQ6PIF6 2116 aa18.97■□□□□ 0.63
SS18-224ENST00000584083 EML6Q6ZMW3 1958 aa18.96■□□□□ 0.63
SS18-224ENST00000584083 A1L4Q6 167 aa18.96■□□□□ 0.63
SS18-224ENST00000584083 A8MVJ9 347 aa18.96■□□□□ 0.63
SS18-224ENST00000584083 NPIPA5E9PKD4 350 aa18.96■□□□□ 0.63
SS18-224ENST00000584083 MANBAO00462 879 aa18.96■□□□□ 0.63
SS18-224ENST00000584083 PGRMC2O15173 223 aa18.96■□□□□ 0.63
SS18-224ENST00000584083 STSP08842 583 aa18.96■□□□□ 0.63
SS18-224ENST00000584083 MYL2P10916 166 aa18.96■□□□□ 0.63
SS18-224ENST00000584083 HMOX2P30519 316 aa18.96■□□□□ 0.63
SS18-224ENST00000584083 CCT5P48643 541 aa18.96■□□□□ 0.63
SS18-224ENST00000584083 MAPK12P53778 367 aa18.96■□□□□ 0.63
SS18-224ENST00000584083 RBPJQ06330 500 aa18.96■□□□□ 0.63
SS18-224ENST00000584083 TCHHL1Q5QJ38 904 aaPredicted RBP18.96■□□□□ 0.63
SS18-224ENST00000584083 C1QL3Q5VWW1 255 aa18.96■□□□□ 0.63
SS18-224ENST00000584083 FAM219BQ5XKK7 198 aa18.96■□□□□ 0.63
SS18-224ENST00000584083 IL20RBQ6UXL0 311 aa18.96■□□□□ 0.63
SS18-224ENST00000584083 DGAT2L6Q6ZPD8 337 aa18.96■□□□□ 0.63
SS18-224ENST00000584083 COMMD6Q7Z4G1 85 aa18.96■□□□□ 0.63
SS18-224ENST00000584083 CPSF7Q8N684 471 aaKnown RBP18.96■□□□□ 0.63
SS18-224ENST00000584083 CCNYL1Q8N7R7 359 aa18.96■□□□□ 0.63
SS18-224ENST00000584083 OR8K3Q8NH51 312 aa18.96■□□□□ 0.63
SS18-224ENST00000584083 METTL6Q8TCB7 284 aa18.96■□□□□ 0.63
SS18-224ENST00000584083 CCDC126Q96EE4 140 aa18.96■□□□□ 0.63
SS18-224ENST00000584083 L3HYPDHQ96EM0 354 aa18.96■□□□□ 0.63
SS18-224ENST00000584083 RASL10BQ96S79 203 aa18.96■□□□□ 0.63
SS18-224ENST00000584083 CNPPD1Q9BV87 410 aa18.96■□□□□ 0.63
SS18-224ENST00000584083 TIMMDC1Q9NPL8 285 aa18.96■□□□□ 0.63
SS18-224ENST00000584083 HPF1Q9NWY4 346 aa18.96■□□□□ 0.63
SS18-224ENST00000584083 EMCNQ9ULC0 261 aa18.96■□□□□ 0.63
SS18-224ENST00000584083 NPIPA1Q9UND3 350 aa18.96■□□□□ 0.63
SS18-224ENST00000584083 CROCCQ5TZA2 2017 aa18.95■□□□□ 0.62
SS18-224ENST00000584083 A0A1B0GUH1 482 aa18.95■□□□□ 0.62
SS18-224ENST00000584083 TLDC2A0PJX2 215 aa18.95■□□□□ 0.62
SS18-224ENST00000584083 KLRC4-KLRK1H3BQV0 150 aa18.95■□□□□ 0.62
SS18-224ENST00000584083 CDH16O75309 829 aa18.95■□□□□ 0.62
SS18-224ENST00000584083 GUCY1B2O75343 617 aa18.95■□□□□ 0.62
SS18-224ENST00000584083 WISP2O76076 250 aa18.95■□□□□ 0.62
SS18-224ENST00000584083 OR6B1O95007 311 aa18.95■□□□□ 0.62
SS18-224ENST00000584083 PIK3R1P27986 724 aa18.95■□□□□ 0.62
SS18-224ENST00000584083 LCP2Q13094 533 aa18.95■□□□□ 0.62
SS18-224ENST00000584083 ZNF267Q14586 743 aaPredicted RBP18.95■□□□□ 0.62
SS18-224ENST00000584083 ZYG11AQ6WRX3 759 aa18.95■□□□□ 0.62
SS18-224ENST00000584083 MDGA2Q7Z553 956 aa18.95■□□□□ 0.62
SS18-224ENST00000584083 GPALPP1Q8IXQ4 340 aa18.95■□□□□ 0.62
SS18-224ENST00000584083 RIT1Q92963 219 aa18.95■□□□□ 0.62
SS18-224ENST00000584083 FBXL20Q96IG2 436 aa18.95■□□□□ 0.62
SS18-224ENST00000584083 SDAD1Q9NVU7 687 aaKnown RBP eCLIP18.95■□□□□ 0.62
SS18-224ENST00000584083 PLEKHB1Q9UF11 243 aaPredicted RBP18.95■□□□□ 0.62
SS18-224ENST00000584083 GRID1Q9ULK0 1009 aa18.95■□□□□ 0.62
SS18-224ENST00000584083 GTF3C1Q12789 2109 aa18.94■□□□□ 0.62
SS18-224ENST00000584083 TRGV8A0A0C4DH27 118 aa18.94■□□□□ 0.62
SS18-224ENST00000584083 WIPF3A6NGB9 483 aa18.94■□□□□ 0.62
SS18-224ENST00000584083 HRKO00198 91 aa18.94■□□□□ 0.62
SS18-224ENST00000584083 PEX1O43933 1283 aa18.94■□□□□ 0.62
SS18-224ENST00000584083 ULK1O75385 1050 aa18.94■□□□□ 0.62
SS18-224ENST00000584083 PROCP04070 461 aa18.94■□□□□ 0.62
SS18-224ENST00000584083 ZNF24P17028 368 aa18.94■□□□□ 0.62
SS18-224ENST00000584083 SOX3P41225 446 aa18.94■□□□□ 0.62
SS18-224ENST00000584083 MEOX1P50221 254 aa18.94■□□□□ 0.62
SS18-224ENST00000584083 PKNOX1P55347 436 aa18.94■□□□□ 0.62
SS18-224ENST00000584083 VSNL1P62760 191 aa18.94■□□□□ 0.62
SS18-224ENST00000584083 ERVK-8P63133 956 aa18.94■□□□□ 0.62
SS18-224ENST00000584083 CCDC153Q494R4 210 aa18.94■□□□□ 0.62
SS18-224ENST00000584083 KRTCAP3Q53RY4 240 aa18.94■□□□□ 0.62
SS18-224ENST00000584083 NDUFAF5Q5TEU4 345 aa18.94■□□□□ 0.62
SS18-224ENST00000584083 SH2D5Q6ZV89 423 aa18.94■□□□□ 0.62
SS18-224ENST00000584083 FJX1Q86VR8 437 aa18.94■□□□□ 0.62
SS18-224ENST00000584083 SULF2Q8IWU5 870 aa18.94■□□□□ 0.62
SS18-224ENST00000584083 CCDC63Q8NA47 563 aa18.94■□□□□ 0.62
SS18-224ENST00000584083 OR4K14Q8NGD5 310 aa18.94■□□□□ 0.62
SS18-224ENST00000584083 GPR137Q96N19 417 aa18.94■□□□□ 0.62
SS18-224ENST00000584083 VPS29Q9UBQ0 182 aa18.94■□□□□ 0.62
SS18-224ENST00000584083 ERVK-19Q9WJR5 959 aa18.94■□□□□ 0.62
SS18-224ENST00000584083 G3V2L1 256 aa18.93■□□□□ 0.62
SS18-224ENST00000584083 COPEO14579 308 aa18.93■□□□□ 0.62
SS18-224ENST00000584083 IGKV3-11P04433 115 aa18.93■□□□□ 0.62
SS18-224ENST00000584083 ENO1P06733 434 aaKnown RBP18.93■□□□□ 0.62
SS18-224ENST00000584083 SLC35E2P0CK97 266 aa18.93■□□□□ 0.62
SS18-224ENST00000584083 HSD3B1P14060 373 aa18.93■□□□□ 0.62
SS18-224ENST00000584083 KRT4P19013 534 aa18.93■□□□□ 0.62
SS18-224ENST00000584083 HSD3B2P26439 372 aa18.93■□□□□ 0.62
SS18-224ENST00000584083 CRHR1P34998 444 aa18.93■□□□□ 0.62
SS18-224ENST00000584083 GPR85P60893 370 aa18.93■□□□□ 0.62
SS18-224ENST00000584083 GALNT1Q10472 559 aaPredicted RBP18.93■□□□□ 0.62
SS18-224ENST00000584083 TBL3Q12788 808 aaKnown RBP18.93■□□□□ 0.62
SS18-224ENST00000584083 ASPHQ12797 758 aa18.93■□□□□ 0.62
SS18-224ENST00000584083 CSTF3Q12996 717 aaKnown RBP18.93■□□□□ 0.62
SS18-224ENST00000584083 OPN5Q6U736 354 aa18.93■□□□□ 0.62
SS18-224ENST00000584083 C1orf52Q8N6N3 182 aaKnown RBP18.93■□□□□ 0.62
SS18-224ENST00000584083 POGLUT1Q8NBL1 392 aa18.93■□□□□ 0.62
SS18-224ENST00000584083 OR2W6PQ8NHA6 318 aa18.93■□□□□ 0.62
SS18-224ENST00000584083 GSTO2Q9H4Y5 243 aa18.93■□□□□ 0.62
SS18-224ENST00000584083 MID1IP1Q9NPA3 183 aa18.93■□□□□ 0.62
SS18-224ENST00000584083 CCDC151A5D8V7 595 aa18.92■□□□□ 0.62
SS18-224ENST00000584083 ASNA1O43681 348 aa18.92■□□□□ 0.62
SS18-224ENST00000584083 PLIN3O60664 434 aa18.92■□□□□ 0.62
SS18-224ENST00000584083 SLU7O95391 586 aaKnown RBP18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms