RNA–Protein interactions for RNA: ENST00000584063.5

CDK5RAP3-231, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,759 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-231ENST00000584063 CCDC71Q8IV32 467 aaPredicted RBP11.08□□□□□ -0.64
CDK5RAP3-231ENST00000584063 ZBTB2Q8N680 514 aa11.08□□□□□ -0.64
CDK5RAP3-231ENST00000584063 TTC29Q8NA56 475 aaPredicted RBP11.08□□□□□ -0.64
CDK5RAP3-231ENST00000584063 OR5K1Q8NHB7 308 aa11.08□□□□□ -0.64
CDK5RAP3-231ENST00000584063 PPP3R2Q96LZ3 170 aa11.08□□□□□ -0.64
CDK5RAP3-231ENST00000584063 YTHDF1Q9BYJ9 559 aaKnown RBP11.08□□□□□ -0.64
CDK5RAP3-231ENST00000584063 ZDHHC6Q9H6R6 413 aa11.08□□□□□ -0.64
CDK5RAP3-231ENST00000584063 MAGEE1Q9HCI5 957 aa11.08□□□□□ -0.64
CDK5RAP3-231ENST00000584063 C1orf109Q9NX04 203 aa11.08□□□□□ -0.64
CDK5RAP3-231ENST00000584063 ARL15Q9NXU5 204 aa11.08□□□□□ -0.64
CDK5RAP3-231ENST00000584063 H2AFY2Q9P0M6 372 aaPredicted RBP11.08□□□□□ -0.64
CDK5RAP3-231ENST00000584063 TNFRSF10DQ9UBN6 386 aa11.08□□□□□ -0.64
CDK5RAP3-231ENST00000584063 SAMHD1Q9Y3Z3 626 aaKnown RBP11.08□□□□□ -0.64
CDK5RAP3-231ENST00000584063 KIAA1671Q9BY89 1806 aa11.08□□□□□ -0.64
CDK5RAP3-231ENST00000584063 ANAPC1Q9H1A4 1944 aa11.08□□□□□ -0.64
CDK5RAP3-231ENST00000584063 LTBP2Q14767 1821 aa11.07□□□□□ -0.64
CDK5RAP3-231ENST00000584063 GLYATL1P3A0A0U1RQE8 302 aa11.07□□□□□ -0.64
CDK5RAP3-231ENST00000584063 ARNTLO00327 626 aa11.07□□□□□ -0.64
CDK5RAP3-231ENST00000584063 POLR1CO15160 346 aaPredicted RBP11.07□□□□□ -0.64
CDK5RAP3-231ENST00000584063 AQP9O43315 295 aa11.07□□□□□ -0.64
CDK5RAP3-231ENST00000584063 ACPPP15309 386 aa11.07□□□□□ -0.64
CDK5RAP3-231ENST00000584063 CD36P16671 472 aa11.07□□□□□ -0.64
CDK5RAP3-231ENST00000584063 ZNF7P17097 686 aaPredicted RBP11.07□□□□□ -0.64
CDK5RAP3-231ENST00000584063 HK1P19367 917 aa11.07□□□□□ -0.64
CDK5RAP3-231ENST00000584063 LHCGRP22888 699 aa11.07□□□□□ -0.64
CDK5RAP3-231ENST00000584063 NR4A2P43354 598 aa11.07□□□□□ -0.64
CDK5RAP3-231ENST00000584063 OR1E2P47887 323 aa11.07□□□□□ -0.64
CDK5RAP3-231ENST00000584063 STARP49675 285 aa11.07□□□□□ -0.64
CDK5RAP3-231ENST00000584063 BOP1Q14137 746 aaKnown RBP11.07□□□□□ -0.64
CDK5RAP3-231ENST00000584063 OXA1LQ15070 435 aa11.07□□□□□ -0.64
CDK5RAP3-231ENST00000584063 CDKN3Q16667 212 aa11.07□□□□□ -0.64
CDK5RAP3-231ENST00000584063 CPZQ66K79 652 aa11.07□□□□□ -0.64
CDK5RAP3-231ENST00000584063 ADAMTSL2Q86TH1 951 aa11.07□□□□□ -0.64
CDK5RAP3-231ENST00000584063 MMAAQ8IVH4 418 aaKnown RBP11.07□□□□□ -0.64
CDK5RAP3-231ENST00000584063 CCDC28AQ8IWP9 274 aa11.07□□□□□ -0.64
CDK5RAP3-231ENST00000584063 KLHL36Q8N4N3 616 aa11.07□□□□□ -0.64
CDK5RAP3-231ENST00000584063 OR8J3Q8NGG0 315 aa11.07□□□□□ -0.64
CDK5RAP3-231ENST00000584063 PYURFQ96I23 114 aa11.07□□□□□ -0.64
CDK5RAP3-231ENST00000584063 CDADC1Q9BWV3 514 aa11.07□□□□□ -0.64
CDK5RAP3-231ENST00000584063 GPR61Q9BZJ8 451 aa11.07□□□□□ -0.64
CDK5RAP3-231ENST00000584063 ZSCAN32Q9NX65 697 aa11.07□□□□□ -0.64
CDK5RAP3-231ENST00000584063 SLC6A14Q9UN76 642 aa11.07□□□□□ -0.64
CDK5RAP3-231ENST00000584063 ZNF175Q9Y473 711 aa11.07□□□□□ -0.64
CDK5RAP3-231ENST00000584063 IRAK3Q9Y616 596 aa11.07□□□□□ -0.64
CDK5RAP3-231ENST00000584063 ARGFXA6NJG6 315 aa11.07□□□□□ -0.64
CDK5RAP3-231ENST00000584063 CENPBD1B2RD01 187 aa11.07□□□□□ -0.64
CDK5RAP3-231ENST00000584063 H7BY64 318 aa11.07□□□□□ -0.64
CDK5RAP3-231ENST00000584063 CCRL2O00421 344 aa11.07□□□□□ -0.64
CDK5RAP3-231ENST00000584063 RFXANKO14593 260 aa11.07□□□□□ -0.64
CDK5RAP3-231ENST00000584063 CNOT3O75175 753 aaKnown RBP11.07□□□□□ -0.64
CDK5RAP3-231ENST00000584063 DLGAP3O95886 979 aa11.07□□□□□ -0.64
CDK5RAP3-231ENST00000584063 TNNI3P19429 210 aa11.07□□□□□ -0.64
CDK5RAP3-231ENST00000584063 MSH3P20585 1137 aa11.07□□□□□ -0.64
CDK5RAP3-231ENST00000584063 ACRV1P26436 265 aa11.07□□□□□ -0.64
CDK5RAP3-231ENST00000584063 CCR7P32248 378 aa11.07□□□□□ -0.64
CDK5RAP3-231ENST00000584063 RPS14P62263 151 aaKnown RBP11.07□□□□□ -0.64
CDK5RAP3-231ENST00000584063 FAM189A2Q15884 450 aa11.07□□□□□ -0.64
CDK5RAP3-231ENST00000584063 GPRC6AQ5T6X5 926 aa11.07□□□□□ -0.64
CDK5RAP3-231ENST00000584063 LCN1P1Q5VSP4 162 aa11.07□□□□□ -0.64
CDK5RAP3-231ENST00000584063 LRRC66Q68CR7 880 aa11.07□□□□□ -0.64
CDK5RAP3-231ENST00000584063 ASTLQ6HA08 431 aaPredicted RBP11.07□□□□□ -0.64
CDK5RAP3-231ENST00000584063 Q6ZVU0 165 aa11.07□□□□□ -0.64
CDK5RAP3-231ENST00000584063 NLGN4XQ8N0W4 816 aa11.07□□□□□ -0.64
CDK5RAP3-231ENST00000584063 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.07□□□□□ -0.64
CDK5RAP3-231ENST00000584063 DCAF4L2Q8NA75 395 aa11.07□□□□□ -0.64
CDK5RAP3-231ENST00000584063 TMEM121BQ9BXQ6 578 aaPredicted RBP11.07□□□□□ -0.64
CDK5RAP3-231ENST00000584063 CD244Q9BZW8 370 aa11.07□□□□□ -0.64
CDK5RAP3-231ENST00000584063 AKIP1Q9NQ31 210 aa11.07□□□□□ -0.64
CDK5RAP3-231ENST00000584063 SERHLQ9NQF3 203 aa11.07□□□□□ -0.64
CDK5RAP3-231ENST00000584063 DIMT1Q9UNQ2 313 aaKnown RBP11.07□□□□□ -0.64
CDK5RAP3-231ENST00000584063 ATG2BQ96BY7 2078 aa11.07□□□□□ -0.64
CDK5RAP3-231ENST00000584063 MYO15AQ9UKN7 3530 aa11.07□□□□□ -0.64
CDK5RAP3-231ENST00000584063 ZNF197O14709 1029 aa11.06□□□□□ -0.64
CDK5RAP3-231ENST00000584063 MOSPD3O75425 235 aa11.06□□□□□ -0.64
CDK5RAP3-231ENST00000584063 PCDH8O95206 1070 aa11.06□□□□□ -0.64
CDK5RAP3-231ENST00000584063 UGT2B4P06133 528 aa11.06□□□□□ -0.64
CDK5RAP3-231ENST00000584063 SPNP16150 400 aa11.06□□□□□ -0.64
CDK5RAP3-231ENST00000584063 IDH2P48735 452 aaKnown RBP11.06□□□□□ -0.64
CDK5RAP3-231ENST00000584063 SCAND1P57086 179 aa11.06□□□□□ -0.64
CDK5RAP3-231ENST00000584063 GRIK2Q13002 908 aa11.06□□□□□ -0.64
CDK5RAP3-231ENST00000584063 KCNJ8Q15842 424 aa11.06□□□□□ -0.64
CDK5RAP3-231ENST00000584063 MSANTD1Q6ZTZ1 278 aa11.06□□□□□ -0.64
CDK5RAP3-231ENST00000584063 HORMAD1Q86X24 394 aa11.06□□□□□ -0.64
CDK5RAP3-231ENST00000584063 LILRA3Q8N6C8 439 aaPredicted RBP11.06□□□□□ -0.64
CDK5RAP3-231ENST00000584063 AGBL5Q8NDL9 886 aa11.06□□□□□ -0.64
CDK5RAP3-231ENST00000584063 SRFBP1Q8NEF9 429 aaKnown RBP11.06□□□□□ -0.64
CDK5RAP3-231ENST00000584063 PPP1R35Q8TAP8 253 aa11.06□□□□□ -0.64
CDK5RAP3-231ENST00000584063 LGALS12Q96DT0 336 aa11.06□□□□□ -0.64
CDK5RAP3-231ENST00000584063 PANX1Q96RD7 426 aa11.06□□□□□ -0.64
CDK5RAP3-231ENST00000584063 TMUB1Q9BVT8 246 aa11.06□□□□□ -0.64
CDK5RAP3-231ENST00000584063 TMEM184CQ9NVA4 438 aa11.06□□□□□ -0.64
CDK5RAP3-231ENST00000584063 VSX1Q9NZR4 365 aaPredicted RBP11.06□□□□□ -0.64
CDK5RAP3-231ENST00000584063 STOML2Q9UJZ1 356 aa11.06□□□□□ -0.64
CDK5RAP3-231ENST00000584063 TMPRSS11EQ9UL52 423 aa11.06□□□□□ -0.64
CDK5RAP3-231ENST00000584063 TESMINQ9Y4I5 508 aa11.06□□□□□ -0.64
CDK5RAP3-231ENST00000584063 NOTCH4Q99466 2003 aa11.06□□□□□ -0.64
CDK5RAP3-231ENST00000584063 SSX4O60224 188 aa11.06□□□□□ -0.64
CDK5RAP3-231ENST00000584063 PCDHGA12O60330 932 aa11.06□□□□□ -0.64
CDK5RAP3-231ENST00000584063 ENGP17813 658 aa11.06□□□□□ -0.64
CDK5RAP3-231ENST00000584063 PCGF2P35227 344 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms