RNA–Protein interactions for RNA: ENST00000582092.1

SS18-220, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 1 (best)

Gene SS18, Length 215 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-220ENST00000582092 MAGED4Q96JG8 741 aa8.79□□□□□ -1
SS18-220ENST00000582092 CNBD2Q96M20 576 aa8.79□□□□□ -1
SS18-220ENST00000582092 TEFMQ96QE5 360 aaKnown RBP8.79□□□□□ -1
SS18-220ENST00000582092 ZNF607Q96SK3 696 aa8.79□□□□□ -1
SS18-220ENST00000582092 DPH2Q9BQC3 489 aaPredicted RBP8.79□□□□□ -1
SS18-220ENST00000582092 ABCG4Q9H172 646 aa8.79□□□□□ -1
SS18-220ENST00000582092 TRIM45Q9H8W5 580 aaPredicted RBP8.79□□□□□ -1
SS18-220ENST00000582092 UCK1Q9HA47 277 aa8.79□□□□□ -1
SS18-220ENST00000582092 ANKHQ9HCJ1 492 aa8.79□□□□□ -1
SS18-220ENST00000582092 PRDM7Q9NQW5 492 aa8.79□□□□□ -1
SS18-220ENST00000582092 GPR27Q9NS67 375 aa8.79□□□□□ -1
SS18-220ENST00000582092 TEX10Q9NXF1 929 aaPredicted RBP8.79□□□□□ -1
SS18-220ENST00000582092 TAS2R7Q9NYW3 318 aa8.79□□□□□ -1
SS18-220ENST00000582092 EXO1Q9UQ84 846 aaKnown RBP8.79□□□□□ -1
SS18-220ENST00000582092 FAM32AQ9Y421 112 aaKnown RBP8.79□□□□□ -1
SS18-220ENST00000582092 NEUROG3Q9Y4Z2 214 aa8.79□□□□□ -1
SS18-220ENST00000582092 SLCO1B1Q9Y6L6 691 aa8.79□□□□□ -1
SS18-220ENST00000582092 NCOR2Q9Y618 2525 aa8.79□□□□□ -1
SS18-220ENST00000582092 TMEM8BA6NDV4 472 aa8.78□□□□□ -1
SS18-220ENST00000582092 GLOD5A6NK44 160 aa8.78□□□□□ -1
SS18-220ENST00000582092 PROM1O43490 865 aa8.78□□□□□ -1
SS18-220ENST00000582092 CBFA2T3O75081 653 aa8.78□□□□□ -1
SS18-220ENST00000582092 RASAL1O95294 804 aa8.78□□□□□ -1
SS18-220ENST00000582092 AIFM1O95831 613 aa8.78□□□□□ -1
SS18-220ENST00000582092 ALBP02768 609 aa8.78□□□□□ -1
SS18-220ENST00000582092 MT-ND1P03886 318 aa8.78□□□□□ -1
SS18-220ENST00000582092 UBTFL6P0CB48 400 aaPredicted RBP8.78□□□□□ -1
SS18-220ENST00000582092 ETFAP13804 333 aa8.78□□□□□ -1
SS18-220ENST00000582092 PVRP15151 417 aa8.78□□□□□ -1
SS18-220ENST00000582092 ITGA2P17301 1181 aa8.78□□□□□ -1
SS18-220ENST00000582092 HOXB9P17482 250 aaPredicted RBP8.78□□□□□ -1
SS18-220ENST00000582092 CKMT2P17540 419 aa8.78□□□□□ -1
SS18-220ENST00000582092 ALOX12P18054 663 aa8.78□□□□□ -1
SS18-220ENST00000582092 EPHA8P29322 1005 aaPredicted RBP8.78□□□□□ -1
SS18-220ENST00000582092 ALDH4A1P30038 563 aa8.78□□□□□ -1
SS18-220ENST00000582092 KHKP50053 298 aa8.78□□□□□ -1
SS18-220ENST00000582092 PRKAG1P54619 331 aa8.78□□□□□ -1
SS18-220ENST00000582092 CASP9P55211 416 aa8.78□□□□□ -1
SS18-220ENST00000582092 VSX2P58304 361 aaPredicted RBP8.78□□□□□ -1
SS18-220ENST00000582092 TXNL4AP83876 142 aaKnown RBP8.78□□□□□ -1
SS18-220ENST00000582092 PRR5P85299 388 aa8.78□□□□□ -1
SS18-220ENST00000582092 CDK6Q00534 326 aa8.78□□□□□ -1
SS18-220ENST00000582092 ELOAQ14241 798 aaKnown RBP8.78□□□□□ -1
SS18-220ENST00000582092 MLC1Q15049 377 aa8.78□□□□□ -1
SS18-220ENST00000582092 DEFB133Q30KQ1 61 aa8.78□□□□□ -1
SS18-220ENST00000582092 DEFB134Q4QY38 66 aa8.78□□□□□ -1
SS18-220ENST00000582092 C14orf28Q4W4Y0 310 aa8.78□□□□□ -1
SS18-220ENST00000582092 OTUD3Q5T2D3 398 aaPredicted RBP8.78□□□□□ -1
SS18-220ENST00000582092 FCRL6Q6DN72 434 aa8.78□□□□□ -1
SS18-220ENST00000582092 HMBOX1Q6NT76 420 aa8.78□□□□□ -1
SS18-220ENST00000582092 REEP3Q6NUK4 255 aa8.78□□□□□ -1
SS18-220ENST00000582092 NIPAL1Q6NVV3 410 aa8.78□□□□□ -1
SS18-220ENST00000582092 TMEM154Q6P9G4 183 aa8.78□□□□□ -1
SS18-220ENST00000582092 CEACAM20Q6UY09 585 aa8.78□□□□□ -1
SS18-220ENST00000582092 ZNF551Q7Z340 670 aaPredicted RBP8.78□□□□□ -1
SS18-220ENST00000582092 ZNF438Q7Z4V0 828 aa8.78□□□□□ -1
SS18-220ENST00000582092 KRT73Q86Y46 540 aa8.78□□□□□ -1
SS18-220ENST00000582092 HIPK1Q86Z02 1210 aa8.78□□□□□ -1
SS18-220ENST00000582092 SLC44A2Q8IWA5 706 aaPredicted RBP8.78□□□□□ -1
SS18-220ENST00000582092 ST13P4Q8IZP2 240 aaPredicted RBP8.78□□□□□ -1
SS18-220ENST00000582092 MMP21Q8N119 569 aa8.78□□□□□ -1
SS18-220ENST00000582092 DHRSXQ8N5I4 330 aa8.78□□□□□ -1
SS18-220ENST00000582092 CSNK1A1LQ8N752 337 aa8.78□□□□□ -1
SS18-220ENST00000582092 KCT2Q8NC54 265 aa8.78□□□□□ -1
SS18-220ENST00000582092 ZNF555Q8NEP9 628 aa8.78□□□□□ -1
SS18-220ENST00000582092 OR4K14Q8NGD5 310 aa8.78□□□□□ -1
SS18-220ENST00000582092 OR56A1Q8NGH5 318 aa8.78□□□□□ -1
SS18-220ENST00000582092 OR5K1Q8NHB7 308 aa8.78□□□□□ -1
SS18-220ENST00000582092 NFKBIDQ8NI38 313 aa8.78□□□□□ -1
SS18-220ENST00000582092 SPPL2AQ8TCT8 520 aa8.78□□□□□ -1
SS18-220ENST00000582092 MAGEE2Q8TD90 523 aaPredicted RBP8.78□□□□□ -1
SS18-220ENST00000582092 UTP15Q8TED0 518 aaKnown RBP8.78□□□□□ -1
SS18-220ENST00000582092 SAP25Q8TEE9 199 aa8.78□□□□□ -1
SS18-220ENST00000582092 CYGBQ8WWM9 190 aa8.78□□□□□ -1
SS18-220ENST00000582092 ADAMTS14Q8WXS8 1223 aa8.78□□□□□ -1
SS18-220ENST00000582092 NCSTNQ92542 709 aa8.78□□□□□ -1
SS18-220ENST00000582092 RSC1A1Q92681 617 aa8.78□□□□□ -1
SS18-220ENST00000582092 TMBIM1Q969X1 311 aa8.78□□□□□ -1
SS18-220ENST00000582092 NEURL3Q96EH8 262 aa8.78□□□□□ -1
SS18-220ENST00000582092 TCTN2Q96GX1 697 aa8.78□□□□□ -1
SS18-220ENST00000582092 CNDP2Q96KP4 475 aaKnown RBP8.78□□□□□ -1
SS18-220ENST00000582092 SLC35G5Q96KT7 338 aa8.78□□□□□ -1
SS18-220ENST00000582092 MAPKAP1Q9BPZ7 522 aa8.78□□□□□ -1
SS18-220ENST00000582092 DUSP23Q9BVJ7 150 aa8.78□□□□□ -1
SS18-220ENST00000582092 SCNM1Q9BWG6 230 aa8.78□□□□□ -1
SS18-220ENST00000582092 ZNF717Q9BY31 904 aaPredicted RBP8.78□□□□□ -1
SS18-220ENST00000582092 TMEM38AQ9H6F2 299 aa8.78□□□□□ -1
SS18-220ENST00000582092 LHX9Q9NQ69 397 aa8.78□□□□□ -1
SS18-220ENST00000582092 C1GALT1Q9NS00 363 aa8.78□□□□□ -1
SS18-220ENST00000582092 SOHLH2Q9NX45 425 aa8.78□□□□□ -1
SS18-220ENST00000582092 C5AR2Q9P296 337 aa8.78□□□□□ -1
SS18-220ENST00000582092 POMT2Q9UKY4 750 aa8.78□□□□□ -1
SS18-220ENST00000582092 OAZ3Q9UMX2 235 aa8.78□□□□□ -1
SS18-220ENST00000582092 ASB4Q9Y574 426 aa8.78□□□□□ -1
SS18-220ENST00000582092 GMEB1Q9Y692 573 aa8.78□□□□□ -1
SS18-220ENST00000582092 LAMA1P25391 3075 aa8.77□□□□□ -1
SS18-220ENST00000582092 A0A1W2PR48 441 aa8.77□□□□□ -1.01
SS18-220ENST00000582092 LILRA5A6NI73 299 aa8.77□□□□□ -1.01
SS18-220ENST00000582092 SLC9B1P1A6NJY1 282 aa8.77□□□□□ -1.01
SS18-220ENST00000582092 EMC8O43402 210 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms