RNA–Protein interactions for RNA: ENST00000581737.1

CSNK1D-220, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 631 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-220ENST00000581737 YIPF2Q9BWQ6 316 aa12.72□□□□□ -0.37
CSNK1D-220ENST00000581737 NPLQ9BXD5 320 aaPredicted RBP12.72□□□□□ -0.37
CSNK1D-220ENST00000581737 SLC25A18Q9H1K4 315 aa12.72□□□□□ -0.37
CSNK1D-220ENST00000581737 VCX3BQ9H321 246 aa12.72□□□□□ -0.37
CSNK1D-220ENST00000581737 OR51B5Q9H339 312 aa12.72□□□□□ -0.37
CSNK1D-220ENST00000581737 MUC13Q9H3R2 512 aa12.72□□□□□ -0.37
CSNK1D-220ENST00000581737 KLHL31Q9H511 634 aa12.72□□□□□ -0.37
CSNK1D-220ENST00000581737 RMND5AQ9H871 391 aa12.72□□□□□ -0.37
CSNK1D-220ENST00000581737 ADA2Q9NZK5 511 aa12.72□□□□□ -0.37
CSNK1D-220ENST00000581737 FARSAQ9Y285 508 aaKnown RBP12.72□□□□□ -0.37
CSNK1D-220ENST00000581737 PTGDR2Q9Y5Y4 395 aa12.72□□□□□ -0.37
CSNK1D-220ENST00000581737 DOPEY2Q9Y3R5 2298 aa12.72□□□□□ -0.37
CSNK1D-220ENST00000581737 IGLV3-12A0A075B6K2 115 aa12.71□□□□□ -0.37
CSNK1D-220ENST00000581737 SGK494L7N484 410 aa12.71□□□□□ -0.37
CSNK1D-220ENST00000581737 RDH16O75452 317 aa12.71□□□□□ -0.37
CSNK1D-220ENST00000581737 TBX6O95947 436 aaPredicted RBP12.71□□□□□ -0.37
CSNK1D-220ENST00000581737 RECKO95980 971 aa12.71□□□□□ -0.37
CSNK1D-220ENST00000581737 PDYNP01213 254 aa12.71□□□□□ -0.37
CSNK1D-220ENST00000581737 IL6P05231 212 aa12.71□□□□□ -0.37
CSNK1D-220ENST00000581737 CYC1P08574 325 aa12.71□□□□□ -0.37
CSNK1D-220ENST00000581737 GP1BBP13224 206 aa12.71□□□□□ -0.37
CSNK1D-220ENST00000581737 RNH1P13489 461 aaKnown RBP12.71□□□□□ -0.37
CSNK1D-220ENST00000581737 RPL3P39023 403 aaKnown RBP12.71□□□□□ -0.37
CSNK1D-220ENST00000581737 FOLR3P41439 243 aa12.71□□□□□ -0.37
CSNK1D-220ENST00000581737 ASMTP46597 345 aa12.71□□□□□ -0.37
CSNK1D-220ENST00000581737 BTN3A2P78410 334 aa12.71□□□□□ -0.37
CSNK1D-220ENST00000581737 ACSM2AQ08AH3 577 aa12.71□□□□□ -0.37
CSNK1D-220ENST00000581737 LRRC74AQ0VAA2 488 aa12.71□□□□□ -0.37
CSNK1D-220ENST00000581737 BNIP2Q12982 314 aa12.71□□□□□ -0.37
CSNK1D-220ENST00000581737 SPIN4Q56A73 249 aa12.71□□□□□ -0.37
CSNK1D-220ENST00000581737 TCHHL1Q5QJ38 904 aaPredicted RBP12.71□□□□□ -0.37
CSNK1D-220ENST00000581737 ACSM2BQ68CK6 577 aa12.71□□□□□ -0.37
CSNK1D-220ENST00000581737 MRPL14Q6P1L8 145 aaKnown RBP12.71□□□□□ -0.37
CSNK1D-220ENST00000581737 ZFP1Q6P2D0 407 aa12.71□□□□□ -0.37
CSNK1D-220ENST00000581737 RIPOR1Q6ZS17 1223 aa12.71□□□□□ -0.37
CSNK1D-220ENST00000581737 COX15Q7KZN9 410 aa12.71□□□□□ -0.37
CSNK1D-220ENST00000581737 PRSS41Q7RTY9 318 aa12.71□□□□□ -0.37
CSNK1D-220ENST00000581737 PAGE2Q7Z2X7 111 aa12.71□□□□□ -0.37
CSNK1D-220ENST00000581737 PDSS2Q86YH6 399 aa12.71□□□□□ -0.37
CSNK1D-220ENST00000581737 AMER3Q8N944 861 aa12.71□□□□□ -0.37
CSNK1D-220ENST00000581737 OR2Y1Q8NGV0 311 aa12.71□□□□□ -0.37
CSNK1D-220ENST00000581737 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.71□□□□□ -0.37
CSNK1D-220ENST00000581737 MIEF2Q96C03 454 aa12.71□□□□□ -0.37
CSNK1D-220ENST00000581737 MTFMTQ96DP5 389 aaKnown RBP12.71□□□□□ -0.37
CSNK1D-220ENST00000581737 QRFPRQ96P65 431 aa12.71□□□□□ -0.37
CSNK1D-220ENST00000581737 OR1F2PQ96R84 312 aa12.71□□□□□ -0.37
CSNK1D-220ENST00000581737 CDRT15Q96T59 188 aa12.71□□□□□ -0.37
CSNK1D-220ENST00000581737 NPAS2Q99743 824 aa12.71□□□□□ -0.37
CSNK1D-220ENST00000581737 SH3GL1Q99961 368 aa12.71□□□□□ -0.37
CSNK1D-220ENST00000581737 ACTL8Q9H568 366 aa12.71□□□□□ -0.37
CSNK1D-220ENST00000581737 AKIRIN1Q9H9L7 192 aaPredicted RBP12.71□□□□□ -0.37
CSNK1D-220ENST00000581737 SLC22A11Q9NSA0 550 aa12.71□□□□□ -0.37
CSNK1D-220ENST00000581737 VPS29Q9UBQ0 182 aa12.71□□□□□ -0.37
CSNK1D-220ENST00000581737 SUCOQ9UBS9 1254 aaKnown RBP12.71□□□□□ -0.37
CSNK1D-220ENST00000581737 CTSFQ9UBX1 484 aa12.71□□□□□ -0.37
CSNK1D-220ENST00000581737 L3MBTL1Q9Y468 752 aa12.71□□□□□ -0.37
CSNK1D-220ENST00000581737 SPACA6W5XKT8 324 aa12.71□□□□□ -0.37
CSNK1D-220ENST00000581737 NUP210LQ5VU65 1888 aa12.7□□□□□ -0.38
CSNK1D-220ENST00000581737 ZNF860A6NHJ4 632 aa12.7□□□□□ -0.38
CSNK1D-220ENST00000581737 ZNF891A8MT65 544 aaPredicted RBP12.7□□□□□ -0.38
CSNK1D-220ENST00000581737 SCELO95171 688 aa12.7□□□□□ -0.38
CSNK1D-220ENST00000581737 PSMG1O95456 288 aa12.7□□□□□ -0.38
CSNK1D-220ENST00000581737 ATXN8OSP0DMR3 200 aa12.7□□□□□ -0.38
CSNK1D-220ENST00000581737 HIST1H1TP22492 207 aaPredicted RBP12.7□□□□□ -0.38
CSNK1D-220ENST00000581737 DIO3P55073 304 aa12.7□□□□□ -0.38
CSNK1D-220ENST00000581737 TRAP1Q12931 704 aaKnown RBP12.7□□□□□ -0.38
CSNK1D-220ENST00000581737 FLOT2Q14254 428 aa12.7□□□□□ -0.38
CSNK1D-220ENST00000581737 NKG7Q16617 165 aa12.7□□□□□ -0.38
CSNK1D-220ENST00000581737 CRTC2Q53ET0 693 aaPredicted RBP12.7□□□□□ -0.38
CSNK1D-220ENST00000581737 OR4C11Q6IEV9 310 aa12.7□□□□□ -0.38
CSNK1D-220ENST00000581737 LCN10Q6JVE6 187 aa12.7□□□□□ -0.38
CSNK1D-220ENST00000581737 PACS2Q86VP3 889 aa12.7□□□□□ -0.38
CSNK1D-220ENST00000581737 NUDT13Q86X67 352 aa12.7□□□□□ -0.38
CSNK1D-220ENST00000581737 RNF175Q8N4F7 328 aa12.7□□□□□ -0.38
CSNK1D-220ENST00000581737 DTWD1Q8N5C7 304 aa12.7□□□□□ -0.38
CSNK1D-220ENST00000581737 TNIP2Q8NFZ5 429 aa12.7□□□□□ -0.38
CSNK1D-220ENST00000581737 OR9I1Q8NGQ6 314 aa12.7□□□□□ -0.38
CSNK1D-220ENST00000581737 OR51Q1Q8NH59 317 aa12.7□□□□□ -0.38
CSNK1D-220ENST00000581737 FBXO27Q8NI29 283 aa12.7□□□□□ -0.38
CSNK1D-220ENST00000581737 STT3BQ8TCJ2 826 aa12.7□□□□□ -0.38
CSNK1D-220ENST00000581737 CCDC124Q96CT7 223 aaKnown RBP12.7□□□□□ -0.38
CSNK1D-220ENST00000581737 ACPTQ9BZG2 426 aa12.7□□□□□ -0.38
CSNK1D-220ENST00000581737 TGIF2Q9GZN2 237 aa12.7□□□□□ -0.38
CSNK1D-220ENST00000581737 AICDAQ9GZX7 198 aa12.7□□□□□ -0.38
CSNK1D-220ENST00000581737 FARSBQ9NSD9 589 aaKnown RBP12.7□□□□□ -0.38
CSNK1D-220ENST00000581737 HCN3Q9P1Z3 774 aa12.7□□□□□ -0.38
CSNK1D-220ENST00000581737 TCFL5Q9UL49 500 aa12.7□□□□□ -0.38
CSNK1D-220ENST00000581737 MRPS33Q9Y291 106 aaKnown RBP12.7□□□□□ -0.38
CSNK1D-220ENST00000581737 PTRH2Q9Y3E5 179 aaKnown RBP12.7□□□□□ -0.38
CSNK1D-220ENST00000581737 LRRK2Q5S007 2527 aa12.69□□□□□ -0.38
CSNK1D-220ENST00000581737 A0A0G2JN53 185 aa12.69□□□□□ -0.38
CSNK1D-220ENST00000581737 ARHGAP10A1A4S6 786 aa12.69□□□□□ -0.38
CSNK1D-220ENST00000581737 VSTM2BA6NLU5 285 aa12.69□□□□□ -0.38
CSNK1D-220ENST00000581737 A8MUI8 341 aa12.69□□□□□ -0.38
CSNK1D-220ENST00000581737 C4orf51C9J302 202 aa12.69□□□□□ -0.38
CSNK1D-220ENST00000581737 SAP18O00422 153 aaKnown RBP12.69□□□□□ -0.38
CSNK1D-220ENST00000581737 PLPP1O14494 284 aa12.69□□□□□ -0.38
CSNK1D-220ENST00000581737 PCDH17O14917 1159 aa12.69□□□□□ -0.38
CSNK1D-220ENST00000581737 CHST10O43529 356 aa12.69□□□□□ -0.38
CSNK1D-220ENST00000581737 SH3BGRLO75368 114 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms