RNA–Protein interactions for RNA: ENST00000580799.2

GGA3-210, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-210ENST00000580799 TLX1P31314 330 aaPredicted RBP9.46□□□□□ -0.9
GGA3-210ENST00000580799 CEACAM8P31997 349 aaPredicted RBP9.46□□□□□ -0.9
GGA3-210ENST00000580799 TIMP3P35625 211 aa9.46□□□□□ -0.9
GGA3-210ENST00000580799 MSH2P43246 934 aa9.46□□□□□ -0.9
GGA3-210ENST00000580799 DGKQP52824 942 aa9.46□□□□□ -0.9
GGA3-210ENST00000580799 ARFIP1P53367 373 aa9.46□□□□□ -0.9
GGA3-210ENST00000580799 DR1Q01658 176 aa9.46□□□□□ -0.9
GGA3-210ENST00000580799 ID2Q02363 134 aa9.46□□□□□ -0.9
GGA3-210ENST00000580799 FOXD4Q12950 439 aaPredicted RBP9.46□□□□□ -0.9
GGA3-210ENST00000580799 PDIA2Q13087 525 aaKnown RBP9.46□□□□□ -0.9
GGA3-210ENST00000580799 CBLBQ13191 982 aa9.46□□□□□ -0.9
GGA3-210ENST00000580799 CHIT1Q13231 466 aa9.46□□□□□ -0.9
GGA3-210ENST00000580799 DAZAP2Q15038 168 aaPredicted RBP9.46□□□□□ -0.9
GGA3-210ENST00000580799 TBCELQ5QJ74 424 aa9.46□□□□□ -0.9
GGA3-210ENST00000580799 PRAMEF20Q5VT98 475 aa9.46□□□□□ -0.9
GGA3-210ENST00000580799 KHDRBS2Q5VWX1 349 aaKnown RBP9.46□□□□□ -0.9
GGA3-210ENST00000580799 MED27Q6P2C8 311 aa9.46□□□□□ -0.9
GGA3-210ENST00000580799 LYPD8Q6UX82 237 aa9.46□□□□□ -0.9
GGA3-210ENST00000580799 SLC29A4Q7RTT9 530 aa9.46□□□□□ -0.9
GGA3-210ENST00000580799 LRRC70Q7Z2Q7 622 aa9.46□□□□□ -0.9
GGA3-210ENST00000580799 CDC20BQ86Y33 519 aa9.46□□□□□ -0.9
GGA3-210ENST00000580799 KIF18BQ86Y91 864 aa9.46□□□□□ -0.9
GGA3-210ENST00000580799 LACC1Q8IV20 430 aa9.46□□□□□ -0.9
GGA3-210ENST00000580799 ANKMY2Q8IV38 441 aa9.46□□□□□ -0.9
GGA3-210ENST00000580799 LAS2Q8IYD9 372 aa9.46□□□□□ -0.9
GGA3-210ENST00000580799 PM20D2Q8IYS1 436 aa9.46□□□□□ -0.9
GGA3-210ENST00000580799 SLC35F6Q8N357 371 aa9.46□□□□□ -0.9
GGA3-210ENST00000580799 RELL2Q8NC24 303 aaPredicted RBP9.46□□□□□ -0.9
GGA3-210ENST00000580799 FAM13CQ8NE31 585 aa9.46□□□□□ -0.9
GGA3-210ENST00000580799 FBXO36Q8NEA4 188 aa9.46□□□□□ -0.9
GGA3-210ENST00000580799 RNASE6Q93091 150 aaKnown RBP9.46□□□□□ -0.9
GGA3-210ENST00000580799 PWWP2AQ96N64 755 aa9.46□□□□□ -0.9
GGA3-210ENST00000580799 SH3GL2Q99962 352 aa9.46□□□□□ -0.9
GGA3-210ENST00000580799 CENPKQ9BS16 269 aa9.46□□□□□ -0.9
GGA3-210ENST00000580799 CD244Q9BZW8 370 aa9.46□□□□□ -0.9
GGA3-210ENST00000580799 LIME1Q9H400 295 aa9.46□□□□□ -0.9
GGA3-210ENST00000580799 RPF2Q9H7B2 306 aaKnown RBP9.46□□□□□ -0.9
GGA3-210ENST00000580799 DLL4Q9NR61 685 aa9.46□□□□□ -0.9
GGA3-210ENST00000580799 TXNDC16Q9P2K2 825 aa9.46□□□□□ -0.9
GGA3-210ENST00000580799 ADGRE2Q9UHX3 823 aa9.46□□□□□ -0.9
GGA3-210ENST00000580799 PHF11Q9UIL8 331 aa9.46□□□□□ -0.9
GGA3-210ENST00000580799 PTBP2Q9UKA9 531 aaKnown RBP9.46□□□□□ -0.9
GGA3-210ENST00000580799 PLEKHA6Q9Y2H5 1048 aa9.46□□□□□ -0.9
GGA3-210ENST00000580799 CHCHD2Q9Y6H1 151 aaPredicted RBP9.46□□□□□ -0.9
GGA3-210ENST00000580799 HRNRQ86YZ3 2850 aaPredicted RBP9.46□□□□□ -0.9
GGA3-210ENST00000580799 PRRC2AP48634 2157 aaKnown RBP9.46□□□□□ -0.9
GGA3-210ENST00000580799 NCKAP5O14513 1909 aa9.45□□□□□ -0.9
GGA3-210ENST00000580799 IQANK1A0A1B0GTG1 560 aa9.45□□□□□ -0.9
GGA3-210ENST00000580799 OR6C76A6NM76 312 aa9.45□□□□□ -0.9
GGA3-210ENST00000580799 CAPN14A8MX76 684 aa9.45□□□□□ -0.9
GGA3-210ENST00000580799 RTCAO00442 366 aaKnown RBP9.45□□□□□ -0.9
GGA3-210ENST00000580799 CCNT2O60583 730 aaKnown RBP9.45□□□□□ -0.9
GGA3-210ENST00000580799 C1QAP02745 245 aa9.45□□□□□ -0.9
GGA3-210ENST00000580799 RAF1P04049 648 aa9.45□□□□□ -0.9
GGA3-210ENST00000580799 DRD2P14416 443 aa9.45□□□□□ -0.9
GGA3-210ENST00000580799 CD1DP15813 335 aa9.45□□□□□ -0.9
GGA3-210ENST00000580799 ALOX15P16050 662 aaPredicted RBP9.45□□□□□ -0.9
GGA3-210ENST00000580799 STMN1P16949 149 aa9.45□□□□□ -0.9
GGA3-210ENST00000580799 TCP1P17987 556 aaKnown RBP9.45□□□□□ -0.9
GGA3-210ENST00000580799 EPORP19235 508 aa9.45□□□□□ -0.9
GGA3-210ENST00000580799 GDF1P27539 372 aa9.45□□□□□ -0.9
GGA3-210ENST00000580799 BUD31P41223 144 aaPredicted RBP9.45□□□□□ -0.9
GGA3-210ENST00000580799 TNFRSF17Q02223 184 aa9.45□□□□□ -0.9
GGA3-210ENST00000580799 PCDH1Q08174 1060 aa9.45□□□□□ -0.9
GGA3-210ENST00000580799 OR4D1Q15615 310 aa9.45□□□□□ -0.9
GGA3-210ENST00000580799 NTRK2Q16620 822 aa9.45□□□□□ -0.9
GGA3-210ENST00000580799 SPRED3Q2MJR0 410 aa9.45□□□□□ -0.9
GGA3-210ENST00000580799 ACSF3Q4G176 576 aaPredicted RBP9.45□□□□□ -0.9
GGA3-210ENST00000580799 FBXO48Q5FWF7 155 aa9.45□□□□□ -0.9
GGA3-210ENST00000580799 OR4C11Q6IEV9 310 aa9.45□□□□□ -0.9
GGA3-210ENST00000580799 PAMR1Q6UXH9 720 aa9.45□□□□□ -0.9
GGA3-210ENST00000580799 RNF111Q6ZNA4 994 aa9.45□□□□□ -0.9
GGA3-210ENST00000580799 SEM1Q6ZVN7 128 aa9.45□□□□□ -0.9
GGA3-210ENST00000580799 GPR180Q86V85 440 aa9.45□□□□□ -0.9
GGA3-210ENST00000580799 ST13P4Q8IZP2 240 aaPredicted RBP9.45□□□□□ -0.9
GGA3-210ENST00000580799 TAGAPQ8N103 731 aa9.45□□□□□ -0.9
GGA3-210ENST00000580799 SPATA6LQ8N4H0 392 aa9.45□□□□□ -0.9
GGA3-210ENST00000580799 OR7G3Q8NG95 312 aa9.45□□□□□ -0.9
GGA3-210ENST00000580799 OR10G3Q8NGC4 313 aa9.45□□□□□ -0.9
GGA3-210ENST00000580799 CDKL2Q92772 493 aa9.45□□□□□ -0.9
GGA3-210ENST00000580799 ESAMQ96AP7 390 aa9.45□□□□□ -0.9
GGA3-210ENST00000580799 HSPBAP1Q96EW2 488 aa9.45□□□□□ -0.9
GGA3-210ENST00000580799 UBXN10Q96LJ8 280 aa9.45□□□□□ -0.9
GGA3-210ENST00000580799 ZNF597Q96LX8 424 aa9.45□□□□□ -0.9
GGA3-210ENST00000580799 DOHHQ9BU89 302 aa9.45□□□□□ -0.9
GGA3-210ENST00000580799 WWTR1Q9GZV5 400 aa9.45□□□□□ -0.9
GGA3-210ENST00000580799 SLC6A15Q9H2J7 730 aa9.45□□□□□ -0.9
GGA3-210ENST00000580799 PRM3Q9NNZ6 103 aa9.45□□□□□ -0.9
GGA3-210ENST00000580799 DMRT3Q9NQL9 472 aa9.45□□□□□ -0.9
GGA3-210ENST00000580799 CBLCQ9ULV8 474 aa9.45□□□□□ -0.9
GGA3-210ENST00000580799 RNF112Q9ULX5 631 aa9.45□□□□□ -0.9
GGA3-210ENST00000580799 MTO1Q9Y2Z2 717 aaKnown RBP9.45□□□□□ -0.9
GGA3-210ENST00000580799 IKBKGQ9Y6K9 419 aa9.45□□□□□ -0.9
GGA3-210ENST00000580799 FLNAP21333 2647 aaKnown RBP9.45□□□□□ -0.9
GGA3-210ENST00000580799 C15orf38-AP3S2A0A0A6YYH1 394 aa9.44□□□□□ -0.9
GGA3-210ENST00000580799 TUBAL3A6NHL2 446 aa9.44□□□□□ -0.9
GGA3-210ENST00000580799 TP53I11O14683 189 aa9.44□□□□□ -0.9
GGA3-210ENST00000580799 TP73O15350 636 aa9.44□□□□□ -0.9
GGA3-210ENST00000580799 PHGDHO43175 533 aaKnown RBP9.44□□□□□ -0.9
GGA3-210ENST00000580799 ZSCAN12O43309 604 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms