RNA–Protein interactions for RNA: ENST00000580738.5

NDEL1-209, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 2

Gene NDEL1, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-209ENST00000580738 RBM24Q9BX46 236 aaKnown RBP17.51■□□□□ 0.39
NDEL1-209ENST00000580738 NINQ8N4C6 2090 aa17.51■□□□□ 0.39
NDEL1-209ENST00000580738 ARID1AO14497 2285 aa17.5■□□□□ 0.39
NDEL1-209ENST00000580738 SH3D21A4FU49 640 aa17.5■□□□□ 0.39
NDEL1-209ENST00000580738 TRIM64A6NGJ6 449 aa17.5■□□□□ 0.39
NDEL1-209ENST00000580738 TRIM64BA6NI03 449 aa17.5■□□□□ 0.39
NDEL1-209ENST00000580738 RTCAO00442 366 aaKnown RBP17.5■□□□□ 0.39
NDEL1-209ENST00000580738 SMPD2O60906 423 aa17.5■□□□□ 0.39
NDEL1-209ENST00000580738 COX7A2P14406 83 aa17.5■□□□□ 0.39
NDEL1-209ENST00000580738 ZNF37AP17032 561 aaPredicted RBP17.5■□□□□ 0.39
NDEL1-209ENST00000580738 SERPINB3P29508 390 aa17.5■□□□□ 0.39
NDEL1-209ENST00000580738 MSH2P43246 934 aa17.5■□□□□ 0.39
NDEL1-209ENST00000580738 STT3AP46977 705 aa17.5■□□□□ 0.39
NDEL1-209ENST00000580738 KCNC1P48547 511 aa17.5■□□□□ 0.39
NDEL1-209ENST00000580738 HNMTP50135 292 aa17.5■□□□□ 0.39
NDEL1-209ENST00000580738 FOXF2Q12947 444 aa17.5■□□□□ 0.39
NDEL1-209ENST00000580738 TEDDM1Q5T9Z0 273 aa17.5■□□□□ 0.39
NDEL1-209ENST00000580738 BICRALQ6AI39 1079 aa17.5■□□□□ 0.39
NDEL1-209ENST00000580738 FAM45BPQ6NSW5 357 aa17.5■□□□□ 0.39
NDEL1-209ENST00000580738 TMEM64Q6YI46 380 aa17.5■□□□□ 0.39
NDEL1-209ENST00000580738 GALNT7Q86SF2 657 aa17.5■□□□□ 0.39
NDEL1-209ENST00000580738 IGDCC3Q8IVU1 814 aa17.5■□□□□ 0.39
NDEL1-209ENST00000580738 LRRC75A-AS1Q8N1F1 130 aa17.5■□□□□ 0.39
NDEL1-209ENST00000580738 ACOT4Q8N9L9 421 aa17.5■□□□□ 0.39
NDEL1-209ENST00000580738 C9orf106Q8NAJ2 232 aa17.5■□□□□ 0.39
NDEL1-209ENST00000580738 SIMC1Q8NDZ2 872 aa17.5■□□□□ 0.39
NDEL1-209ENST00000580738 FAM45AQ8TCE6 357 aa17.5■□□□□ 0.39
NDEL1-209ENST00000580738 SMPDL3BQ92485 455 aa17.5■□□□□ 0.39
NDEL1-209ENST00000580738 MAGOHBQ96A72 148 aaKnown RBP17.5■□□□□ 0.39
NDEL1-209ENST00000580738 RHBDF1Q96CC6 855 aa17.5■□□□□ 0.39
NDEL1-209ENST00000580738 WDYHV1Q96HA8 205 aa17.5■□□□□ 0.39
NDEL1-209ENST00000580738 ZNF597Q96LX8 424 aa17.5■□□□□ 0.39
NDEL1-209ENST00000580738 DGAT2Q96PD7 388 aa17.5■□□□□ 0.39
NDEL1-209ENST00000580738 KCNC2Q96PR1 638 aa17.5■□□□□ 0.39
NDEL1-209ENST00000580738 GAL3ST4Q96RP7 486 aa17.5■□□□□ 0.39
NDEL1-209ENST00000580738 PLAC1Q9HBJ0 212 aa17.5■□□□□ 0.39
NDEL1-209ENST00000580738 GALNT8Q9NY28 637 aa17.5■□□□□ 0.39
NDEL1-209ENST00000580738 OARD1Q9Y530 152 aa17.5■□□□□ 0.39
NDEL1-209ENST00000580738 FREM3P0C091 2139 aa17.5■□□□□ 0.39
NDEL1-209ENST00000580738 IL18BPO95998 194 aa17.49■□□□□ 0.39
NDEL1-209ENST00000580738 BMP7P18075 431 aa17.49■□□□□ 0.39
NDEL1-209ENST00000580738 ATP5A1P25705 553 aaKnown RBP17.49■□□□□ 0.39
NDEL1-209ENST00000580738 HPDP32754 393 aaPredicted RBP17.49■□□□□ 0.39
NDEL1-209ENST00000580738 CDK9P50750 372 aaKnown RBP17.49■□□□□ 0.39
NDEL1-209ENST00000580738 IGLV3-21P80748 117 aaPredicted RBP17.49■□□□□ 0.39
NDEL1-209ENST00000580738 PPP2R2BQ00005 443 aa17.49■□□□□ 0.39
NDEL1-209ENST00000580738 ZNF460Q14592 562 aa17.49■□□□□ 0.39
NDEL1-209ENST00000580738 SF3B4Q15427 424 aaKnown RBP eCLIP17.49■□□□□ 0.393e-11■■■■□ 20.8
NDEL1-209ENST00000580738 TSNQ15631 228 aaKnown RBP17.49■□□□□ 0.39
NDEL1-209ENST00000580738 MSS51Q4VC12 460 aa17.49■□□□□ 0.39
NDEL1-209ENST00000580738 SPANXN3Q5MJ09 141 aa17.49■□□□□ 0.39
NDEL1-209ENST00000580738 FNDC7Q5VTL7 733 aa17.49■□□□□ 0.39
NDEL1-209ENST00000580738 CAPN12Q6ZSI9 719 aa17.49■□□□□ 0.39
NDEL1-209ENST00000580738 SYDE1Q6ZW31 735 aaPredicted RBP17.49■□□□□ 0.39
NDEL1-209ENST00000580738 LUZP2Q86TE4 346 aa17.49■□□□□ 0.39
NDEL1-209ENST00000580738 DIO2Q92813 273 aa17.49■□□□□ 0.39
NDEL1-209ENST00000580738 ISL2Q96A47 359 aa17.49■□□□□ 0.39
NDEL1-209ENST00000580738 CERS2Q96G23 380 aa17.49■□□□□ 0.39
NDEL1-209ENST00000580738 FBXL20Q96IG2 436 aa17.49■□□□□ 0.39
NDEL1-209ENST00000580738 GNRHR2Q96P88 292 aa17.49■□□□□ 0.39
NDEL1-209ENST00000580738 BDH2Q9BUT1 245 aa17.49■□□□□ 0.39
NDEL1-209ENST00000580738 UGT2B28Q9BY64 529 aa17.49■□□□□ 0.39
NDEL1-209ENST00000580738 PITHD1Q9GZP4 211 aaPredicted RBP17.49■□□□□ 0.39
NDEL1-209ENST00000580738 UBQLN3Q9H347 655 aa17.49■□□□□ 0.39
NDEL1-209ENST00000580738 PPANQ9NQ55 473 aaKnown RBP17.49■□□□□ 0.39
NDEL1-209ENST00000580738 MXRA5Q9NR99 2828 aa17.49■□□□□ 0.39
NDEL1-209ENST00000580738 NCF1BA6NI72 391 aaPredicted RBP17.48■□□□□ 0.39
NDEL1-209ENST00000580738 NCF1CA8MVU1 366 aaPredicted RBP17.48■□□□□ 0.39
NDEL1-209ENST00000580738 SH3BGRLO75368 114 aa17.48■□□□□ 0.39
NDEL1-209ENST00000580738 TTC4O95801 387 aa17.48■□□□□ 0.39
NDEL1-209ENST00000580738 HPNP05981 417 aa17.48■□□□□ 0.39
NDEL1-209ENST00000580738 TMIGD3P0DMS9 266 aaPredicted RBP17.48■□□□□ 0.39
NDEL1-209ENST00000580738 NCF1P14598 390 aaPredicted RBP17.48■□□□□ 0.39
NDEL1-209ENST00000580738 CD22P20273 847 aa17.48■□□□□ 0.39
NDEL1-209ENST00000580738 CPN2P22792 545 aa17.48■□□□□ 0.39
NDEL1-209ENST00000580738 SOX18P35713 384 aa17.48■□□□□ 0.39
NDEL1-209ENST00000580738 SLCO1A2P46721 670 aa17.48■□□□□ 0.39
NDEL1-209ENST00000580738 TGM3Q08188 693 aa17.48■□□□□ 0.39
NDEL1-209ENST00000580738 DOC2AQ14183 400 aa17.48■□□□□ 0.39
NDEL1-209ENST00000580738 NTRK2Q16620 822 aa17.48■□□□□ 0.39
NDEL1-209ENST00000580738 EIPR1Q53HC9 387 aa17.48■□□□□ 0.39
NDEL1-209ENST00000580738 FBXO48Q5FWF7 155 aa17.48■□□□□ 0.39
NDEL1-209ENST00000580738 YTHDF3Q7Z739 585 aaKnown RBP17.48■□□□□ 0.39
NDEL1-209ENST00000580738 PPIL6Q8IXY8 311 aa17.48■□□□□ 0.39
NDEL1-209ENST00000580738 DND1Q8IYX4 353 aaKnown RBP17.48■□□□□ 0.39
NDEL1-209ENST00000580738 ANKRD49Q8WVL7 239 aa17.48■□□□□ 0.39
NDEL1-209ENST00000580738 RBM18Q96H35 190 aaKnown RBP17.48■□□□□ 0.39
NDEL1-209ENST00000580738 PIP5K1AQ99755 562 aa17.48■□□□□ 0.39
NDEL1-209ENST00000580738 WWTR1Q9GZV5 400 aa17.48■□□□□ 0.39
NDEL1-209ENST00000580738 CALHM2Q9HA72 323 aa17.48■□□□□ 0.39
NDEL1-209ENST00000580738 ANKRD33BA6NCL7 494 aa17.47■□□□□ 0.39
NDEL1-209ENST00000580738 CASKO14936 926 aa17.47■□□□□ 0.39
NDEL1-209ENST00000580738 ERN1O75460 977 aaKnown RBP17.47■□□□□ 0.39
NDEL1-209ENST00000580738 NHSL2Q5HYW2 709 aa17.47■□□□□ 0.39
NDEL1-209ENST00000580738 WIPI1Q5MNZ9 446 aaPredicted RBP17.47■□□□□ 0.39
NDEL1-209ENST00000580738 RNASEH2BQ5TBB1 312 aaKnown RBP17.47■□□□□ 0.39
NDEL1-209ENST00000580738 TRMT10BQ6PF06 316 aaKnown RBP17.47■□□□□ 0.39
NDEL1-209ENST00000580738 NKAPQ8N5F7 415 aaKnown RBP17.47■□□□□ 0.39
NDEL1-209ENST00000580738 ANKRD7Q92527 254 aa17.47■□□□□ 0.39
NDEL1-209ENST00000580738 PIGTQ969N2 578 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 108.3 ms