RNA–Protein interactions for RNA: ENST00000580019.1

KPNB1-208, Transcript of karyopherin subunit beta 1, humanhuman

TSL 2

Gene KPNB1, Length 427 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNB1-208ENST00000580019 MX1P20591 662 aa2.88□□□□□ -1.95
KPNB1-208ENST00000580019 CA8P35219 290 aa2.88□□□□□ -1.95
KPNB1-208ENST00000580019 HSD17B2P37059 387 aa2.88□□□□□ -1.95
KPNB1-208ENST00000580019 ALDH3B1P43353 468 aa2.88□□□□□ -1.95
KPNB1-208ENST00000580019 OR3A3P47888 321 aa2.88□□□□□ -1.95
KPNB1-208ENST00000580019 FNTAP49354 379 aa2.88□□□□□ -1.95
KPNB1-208ENST00000580019 COMPP49747 757 aaPredicted RBP2.88□□□□□ -1.95
KPNB1-208ENST00000580019 ACADVLP49748 655 aa2.88□□□□□ -1.95
KPNB1-208ENST00000580019 ENTPD1P49961 510 aa2.88□□□□□ -1.95
KPNB1-208ENST00000580019 HNRNPH2P55795 449 aaKnown RBP2.88□□□□□ -1.95
KPNB1-208ENST00000580019 CNTN2Q02246 1040 aa2.88□□□□□ -1.95
KPNB1-208ENST00000580019 GABPAQ06546 454 aa2.88□□□□□ -1.95
KPNB1-208ENST00000580019 KLC1Q07866 573 aa2.88□□□□□ -1.95
KPNB1-208ENST00000580019 FGL1Q08830 312 aa2.88□□□□□ -1.95
KPNB1-208ENST00000580019 RASGEF1BQ0VAM2 473 aa2.88□□□□□ -1.95
KPNB1-208ENST00000580019 FUT7Q11130 342 aa2.88□□□□□ -1.95
KPNB1-208ENST00000580019 HNRNPDQ14103 355 aaKnown RBP2.88□□□□□ -1.95
KPNB1-208ENST00000580019 KEAP1Q14145 624 aa2.88□□□□□ -1.95
KPNB1-208ENST00000580019 TMEM132DQ14C87 1099 aa2.88□□□□□ -1.95
KPNB1-208ENST00000580019 DCAF4L1Q3SXM0 396 aa2.88□□□□□ -1.95
KPNB1-208ENST00000580019 LRIT3Q3SXY7 679 aa2.88□□□□□ -1.95
KPNB1-208ENST00000580019 MPPE1Q53F39 396 aa2.88□□□□□ -1.95
KPNB1-208ENST00000580019 PDLIM3Q53GG5 364 aaPredicted RBP2.88□□□□□ -1.95
KPNB1-208ENST00000580019 SPANXN2Q5MJ10 180 aa2.88□□□□□ -1.95
KPNB1-208ENST00000580019 C20orf194Q5TEA3 1177 aa2.88□□□□□ -1.95
KPNB1-208ENST00000580019 PRAMEF5Q5TYX0 476 aa2.88□□□□□ -1.95
KPNB1-208ENST00000580019 PRAMEF6Q5VXH4 476 aa2.88□□□□□ -1.95
KPNB1-208ENST00000580019 TTC19Q6DKK2 380 aaPredicted RBP2.88□□□□□ -1.95
KPNB1-208ENST00000580019 TMEM225Q6GV28 225 aa2.88□□□□□ -1.95
KPNB1-208ENST00000580019 TTC27Q6P3X3 843 aa2.88□□□□□ -1.95
KPNB1-208ENST00000580019 SYT10Q6XYQ8 523 aa2.88□□□□□ -1.95
KPNB1-208ENST00000580019 ZNF813Q6ZN06 617 aa2.88□□□□□ -1.95
KPNB1-208ENST00000580019 IL17RELQ6ZVW7 336 aa2.88□□□□□ -1.95
KPNB1-208ENST00000580019 ANO5Q75V66 913 aa2.88□□□□□ -1.95
KPNB1-208ENST00000580019 ZNF367Q7RTV3 350 aa2.88□□□□□ -1.95
KPNB1-208ENST00000580019 ANKRD33Q7Z3H0 272 aa2.88□□□□□ -1.95
KPNB1-208ENST00000580019 LONP2Q86WA8 852 aa2.88□□□□□ -1.95
KPNB1-208ENST00000580019 CDR2LQ86X02 465 aaPredicted RBP2.88□□□□□ -1.95
KPNB1-208ENST00000580019 CBWD2Q8IUF1 395 aa2.88□□□□□ -1.95
KPNB1-208ENST00000580019 LRRC75A-AS1Q8N1F1 130 aa2.88□□□□□ -1.95
KPNB1-208ENST00000580019 PRSS35Q8N3Z0 413 aa2.88□□□□□ -1.95
KPNB1-208ENST00000580019 TMEM99Q8N816 258 aa2.88□□□□□ -1.95
KPNB1-208ENST00000580019 COLGALT1Q8NBJ5 622 aa2.88□□□□□ -1.95
KPNB1-208ENST00000580019 SPATA4Q8NEY3 305 aa2.88□□□□□ -1.95
KPNB1-208ENST00000580019 GPRC5AQ8NFJ5 357 aa2.88□□□□□ -1.95
KPNB1-208ENST00000580019 BBS1Q8NFJ9 593 aa2.88□□□□□ -1.95
KPNB1-208ENST00000580019 MAGEC3Q8TD91 643 aa2.88□□□□□ -1.95
KPNB1-208ENST00000580019 DNASE2BQ8WZ79 361 aa2.88□□□□□ -1.95
KPNB1-208ENST00000580019 SEMA4DQ92854 862 aa2.88□□□□□ -1.95
KPNB1-208ENST00000580019 MAP4K1Q92918 833 aa2.88□□□□□ -1.95
KPNB1-208ENST00000580019 EMG1Q92979 244 aaKnown RBP2.88□□□□□ -1.95
KPNB1-208ENST00000580019 GLYATL1Q969I3 302 aa2.88□□□□□ -1.95
KPNB1-208ENST00000580019 TSACCQ96A04 125 aaPredicted RBP2.88□□□□□ -1.95
KPNB1-208ENST00000580019 MCUR1Q96AQ8 359 aa2.88□□□□□ -1.95
KPNB1-208ENST00000580019 RAB39BQ96DA2 213 aa2.88□□□□□ -1.95
KPNB1-208ENST00000580019 NRBF2Q96F24 287 aa2.88□□□□□ -1.95
KPNB1-208ENST00000580019 ATP6V1G3Q96LB4 118 aa2.88□□□□□ -1.95
KPNB1-208ENST00000580019 VPS35Q96QK1 796 aa2.88□□□□□ -1.95
KPNB1-208ENST00000580019 TUBA1CQ9BQE3 449 aa2.88□□□□□ -1.95
KPNB1-208ENST00000580019 NUP58Q9BVL2 599 aa2.88□□□□□ -1.95
KPNB1-208ENST00000580019 MIS12Q9H081 205 aa2.88□□□□□ -1.95
KPNB1-208ENST00000580019 SDCBP2Q9H190 292 aa2.88□□□□□ -1.95
KPNB1-208ENST00000580019 MED20Q9H944 212 aa2.88□□□□□ -1.95
KPNB1-208ENST00000580019 SPAG4Q9NPE6 437 aa2.88□□□□□ -1.95
KPNB1-208ENST00000580019 DDX28Q9NUL7 540 aaKnown RBP2.88□□□□□ -1.95
KPNB1-208ENST00000580019 EXOC1Q9NV70 894 aa2.88□□□□□ -1.95
KPNB1-208ENST00000580019 TMEM51Q9NW97 253 aa2.88□□□□□ -1.95
KPNB1-208ENST00000580019 FAM120CQ9NX05 1096 aaKnown RBP2.88□□□□□ -1.95
KPNB1-208ENST00000580019 MIOSQ9NXC5 875 aa2.88□□□□□ -1.95
KPNB1-208ENST00000580019 SEC14L3Q9UDX4 400 aa2.88□□□□□ -1.95
KPNB1-208ENST00000580019 LRWD1Q9UFC0 647 aa2.88□□□□□ -1.95
KPNB1-208ENST00000580019 ZNF490Q9ULM2 529 aaPredicted RBP2.88□□□□□ -1.95
KPNB1-208ENST00000580019 NIP7Q9Y221 180 aaKnown RBP eCLIP2.88□□□□□ -1.95
KPNB1-208ENST00000580019 N6AMT1Q9Y5N5 214 aa2.88□□□□□ -1.95
KPNB1-208ENST00000580019 TECPR2O15040 1411 aa2.87□□□□□ -1.95
KPNB1-208ENST00000580019 EIF2AK4Q9P2K8 1649 aaKnown RBP2.87□□□□□ -1.95
KPNB1-208ENST00000580019 MYO5BQ9ULV0 1848 aa2.87□□□□□ -1.95
KPNB1-208ENST00000580019 SZT2Q5T011 3432 aa2.87□□□□□ -1.95
KPNB1-208ENST00000580019 TRAV26-1A0A087WT03 109 aa2.87□□□□□ -1.95
KPNB1-208ENST00000580019 KIR2DS5A0A0G2JLQ3 304 aa2.87□□□□□ -1.95
KPNB1-208ENST00000580019 A0A1W2PN81 502 aa2.87□□□□□ -1.95
KPNB1-208ENST00000580019 HEATR9A2RTY3 570 aa2.87□□□□□ -1.95
KPNB1-208ENST00000580019 ARHGEF35A5YM69 484 aa2.87□□□□□ -1.95
KPNB1-208ENST00000580019 ACOD1A6NK06 481 aa2.87□□□□□ -1.95
KPNB1-208ENST00000580019 PRR32B1ATL7 298 aa2.87□□□□□ -1.95
KPNB1-208ENST00000580019 C17orf105B2RV13 164 aa2.87□□□□□ -1.95
KPNB1-208ENST00000580019 ANKRD66B4E2M5 251 aa2.87□□□□□ -1.95
KPNB1-208ENST00000580019 WASH3PC4AMC7 463 aa2.87□□□□□ -1.95
KPNB1-208ENST00000580019 PPIAL4DF5H284 164 aa2.87□□□□□ -1.95
KPNB1-208ENST00000580019 KIR2DS3K7RE56 304 aa2.87□□□□□ -1.95
KPNB1-208ENST00000580019 ADAM10O14672 748 aa2.87□□□□□ -1.95
KPNB1-208ENST00000580019 NVLO15381 856 aaKnown RBP2.87□□□□□ -1.95
KPNB1-208ENST00000580019 ZNF264O43296 627 aa2.87□□□□□ -1.95
KPNB1-208ENST00000580019 HSPA12AO43301 675 aa2.87□□□□□ -1.95
KPNB1-208ENST00000580019 SYT7O43581 403 aa2.87□□□□□ -1.95
KPNB1-208ENST00000580019 BUD23O43709 281 aaKnown RBP2.87□□□□□ -1.95
KPNB1-208ENST00000580019 ZIC3O60481 467 aa2.87□□□□□ -1.95
KPNB1-208ENST00000580019 CIDEAO60543 219 aa2.87□□□□□ -1.95
KPNB1-208ENST00000580019 FCMRO60667 390 aa2.87□□□□□ -1.95
KPNB1-208ENST00000580019 CLN5O75503 358 aa2.87□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms