RNA–Protein interactions for RNA: ENST00000579316.5

CSNK1D-211, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 692 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-211ENST00000579316 UGT2B28Q9BY64 529 aa12.65□□□□□ -0.38
CSNK1D-211ENST00000579316 PARVBQ9HBI1 364 aa12.65□□□□□ -0.38
CSNK1D-211ENST00000579316 MED12Q93074 2177 aa12.64□□□□□ -0.39
CSNK1D-211ENST00000579316 MED12LQ86YW9 2145 aa12.64□□□□□ -0.39
CSNK1D-211ENST00000579316 ANKRD33BA6NCL7 494 aa12.64□□□□□ -0.39
CSNK1D-211ENST00000579316 FAM187AA6NFU0 413 aa12.64□□□□□ -0.39
CSNK1D-211ENST00000579316 CYR61O00622 381 aa12.64□□□□□ -0.39
CSNK1D-211ENST00000579316 DNALI1O14645 258 aaPredicted RBP12.64□□□□□ -0.39
CSNK1D-211ENST00000579316 CTNSO60931 367 aa12.64□□□□□ -0.39
CSNK1D-211ENST00000579316 C8GP07360 202 aa12.64□□□□□ -0.39
CSNK1D-211ENST00000579316 THBS2P35442 1172 aa12.64□□□□□ -0.39
CSNK1D-211ENST00000579316 SLCO1A2P46721 670 aa12.64□□□□□ -0.39
CSNK1D-211ENST00000579316 NR1H2P55055 460 aa12.64□□□□□ -0.39
CSNK1D-211ENST00000579316 DIO3P55073 304 aa12.64□□□□□ -0.39
CSNK1D-211ENST00000579316 BTN3A2P78410 334 aa12.64□□□□□ -0.39
CSNK1D-211ENST00000579316 RUNX1T1Q06455 604 aa12.64□□□□□ -0.39
CSNK1D-211ENST00000579316 C2orf54Q08AI8 447 aa12.64□□□□□ -0.39
CSNK1D-211ENST00000579316 RCAN2Q14206 197 aa12.64□□□□□ -0.39
CSNK1D-211ENST00000579316 ETFDHQ16134 617 aa12.64□□□□□ -0.39
CSNK1D-211ENST00000579316 TOR1AIP1Q5JTV8 583 aa12.64□□□□□ -0.39
CSNK1D-211ENST00000579316 LRRC8EQ6NSJ5 796 aa12.64□□□□□ -0.39
CSNK1D-211ENST00000579316 ZNF549Q6P9A3 640 aa12.64□□□□□ -0.39
CSNK1D-211ENST00000579316 ZNF572Q7Z3I7 529 aaPredicted RBP12.64□□□□□ -0.39
CSNK1D-211ENST00000579316 CLNKQ7Z7G1 428 aa12.64□□□□□ -0.39
CSNK1D-211ENST00000579316 ADGRE4PQ86SQ3 457 aa12.64□□□□□ -0.39
CSNK1D-211ENST00000579316 BBOF1Q8ND07 529 aa12.64□□□□□ -0.39
CSNK1D-211ENST00000579316 OR10G3Q8NGC4 313 aa12.64□□□□□ -0.39
CSNK1D-211ENST00000579316 GABPB2Q8TAK5 448 aaPredicted RBP12.64□□□□□ -0.39
CSNK1D-211ENST00000579316 ZNF721Q8TF20 911 aa12.64□□□□□ -0.39
CSNK1D-211ENST00000579316 SLC5A11Q8WWX8 675 aa12.64□□□□□ -0.39
CSNK1D-211ENST00000579316 ALKBH8Q96BT7 664 aaKnown RBP12.64□□□□□ -0.39
CSNK1D-211ENST00000579316 ZNF597Q96LX8 424 aa12.64□□□□□ -0.39
CSNK1D-211ENST00000579316 JSRP1Q96MG2 331 aaPredicted RBP12.64□□□□□ -0.39
CSNK1D-211ENST00000579316 UCN2Q96RP3 112 aa12.64□□□□□ -0.39
CSNK1D-211ENST00000579316 TM9SF2Q99805 663 aa12.64□□□□□ -0.39
CSNK1D-211ENST00000579316 PIGQQ9BRB3 760 aa12.64□□□□□ -0.39
CSNK1D-211ENST00000579316 DOHHQ9BU89 302 aa12.64□□□□□ -0.39
CSNK1D-211ENST00000579316 REG4Q9BYZ8 158 aa12.64□□□□□ -0.39
CSNK1D-211ENST00000579316 AMBRA1Q9C0C7 1298 aa12.64□□□□□ -0.39
CSNK1D-211ENST00000579316 ACBD3Q9H3P7 528 aa12.64□□□□□ -0.39
CSNK1D-211ENST00000579316 KLHL28Q9NXS3 571 aa12.64□□□□□ -0.39
CSNK1D-211ENST00000579316 PACSIN3Q9UKS6 424 aa12.64□□□□□ -0.39
CSNK1D-211ENST00000579316 SVEP1Q4LDE5 3571 aa12.63□□□□□ -0.39
CSNK1D-211ENST00000579316 TCRBV7S3A2A0A539 114 aa12.63□□□□□ -0.39
CSNK1D-211ENST00000579316 A8MV72 311 aaPredicted RBP12.63□□□□□ -0.39
CSNK1D-211ENST00000579316 C17orf105B2RV13 164 aa12.63□□□□□ -0.39
CSNK1D-211ENST00000579316 FBXO45P0C2W1 286 aa12.63□□□□□ -0.39
CSNK1D-211ENST00000579316 SOX18P35713 384 aa12.63□□□□□ -0.39
CSNK1D-211ENST00000579316 DHX9Q08211 1270 aaKnown RBP12.63□□□□□ -0.39
CSNK1D-211ENST00000579316 MORF4L2Q15014 288 aa12.63□□□□□ -0.39
CSNK1D-211ENST00000579316 CLEC12BQ2HXU8 276 aa12.63□□□□□ -0.39
CSNK1D-211ENST00000579316 TBCELQ5QJ74 424 aa12.63□□□□□ -0.39
CSNK1D-211ENST00000579316 RNASEH2BQ5TBB1 312 aaKnown RBP12.63□□□□□ -0.39
CSNK1D-211ENST00000579316 DUPD1Q68J44 220 aa12.63□□□□□ -0.39
CSNK1D-211ENST00000579316 NEPROQ6NW34 567 aa12.63□□□□□ -0.39
CSNK1D-211ENST00000579316 CASC4Q6P4E1 433 aa12.63□□□□□ -0.39
CSNK1D-211ENST00000579316 CES3Q6UWW8 571 aa12.63□□□□□ -0.39
CSNK1D-211ENST00000579316 NAT8LQ8N9F0 302 aa12.63□□□□□ -0.39
CSNK1D-211ENST00000579316 FAM47BQ8NA70 645 aa12.63□□□□□ -0.39
CSNK1D-211ENST00000579316 NEIL2Q969S2 332 aa12.63□□□□□ -0.39
CSNK1D-211ENST00000579316 GAL3ST3Q96A11 431 aa12.63□□□□□ -0.39
CSNK1D-211ENST00000579316 GPR21Q99679 349 aa12.63□□□□□ -0.39
CSNK1D-211ENST00000579316 ALOXE3Q9BYJ1 711 aa12.63□□□□□ -0.39
CSNK1D-211ENST00000579316 PELI2Q9HAT8 420 aa12.63□□□□□ -0.39
CSNK1D-211ENST00000579316 COPS7AQ9UBW8 275 aa12.63□□□□□ -0.39
CSNK1D-211ENST00000579316 CDC42EP3Q9UKI2 254 aa12.63□□□□□ -0.39
CSNK1D-211ENST00000579316 SLC6A5Q9Y345 797 aa12.63□□□□□ -0.39
CSNK1D-211ENST00000579316 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.62□□□□□ -0.39
CSNK1D-211ENST00000579316 MAGEB16A2A368 324 aa12.62□□□□□ -0.39
CSNK1D-211ENST00000579316 SDR42E2A6NKP2 422 aa12.62□□□□□ -0.39
CSNK1D-211ENST00000579316 EFCAB8A8MWE9 144 aa12.62□□□□□ -0.39
CSNK1D-211ENST00000579316 GOLGA8MH3BSY2 632 aa12.62□□□□□ -0.39
CSNK1D-211ENST00000579316 MSTNO14793 375 aa12.62□□□□□ -0.39
CSNK1D-211ENST00000579316 TRAPPC6AO75865 159 aa12.62□□□□□ -0.39
CSNK1D-211ENST00000579316 TNFSF13O75888 250 aa12.62□□□□□ -0.39
CSNK1D-211ENST00000579316 SIX3O95343 332 aaPredicted RBP12.62□□□□□ -0.39
CSNK1D-211ENST00000579316 ETHE1O95571 254 aa12.62□□□□□ -0.39
CSNK1D-211ENST00000579316 IGKV3-11P04433 115 aa12.62□□□□□ -0.39
CSNK1D-211ENST00000579316 CYP4B1P13584 511 aa12.62□□□□□ -0.39
CSNK1D-211ENST00000579316 PAMP19021 973 aa12.62□□□□□ -0.39
CSNK1D-211ENST00000579316 MGAT1P26572 445 aa12.62□□□□□ -0.39
CSNK1D-211ENST00000579316 CCKARP32238 428 aa12.62□□□□□ -0.39
CSNK1D-211ENST00000579316 CPOXP36551 454 aa12.62□□□□□ -0.39
CSNK1D-211ENST00000579316 STXBP1P61764 594 aaKnown RBP12.62□□□□□ -0.39
CSNK1D-211ENST00000579316 FAM27E3Q08E93 113 aa12.62□□□□□ -0.39
CSNK1D-211ENST00000579316 CALCOCO2Q13137 446 aa12.62□□□□□ -0.39
CSNK1D-211ENST00000579316 GAB1Q13480 694 aa12.62□□□□□ -0.39
CSNK1D-211ENST00000579316 VEZF1Q14119 521 aa12.62□□□□□ -0.39
CSNK1D-211ENST00000579316 CSHL1Q14406 222 aa12.62□□□□□ -0.39
CSNK1D-211ENST00000579316 ANKRD22Q5VYY1 191 aa12.62□□□□□ -0.39
CSNK1D-211ENST00000579316 C9orf40Q8IXQ3 194 aa12.62□□□□□ -0.39
CSNK1D-211ENST00000579316 SLC44A1Q8WWI5 657 aa12.62□□□□□ -0.39
CSNK1D-211ENST00000579316 WNT2BQ93097 391 aa12.62□□□□□ -0.39
CSNK1D-211ENST00000579316 ABTB1Q969K4 478 aaPredicted RBP12.62□□□□□ -0.39
CSNK1D-211ENST00000579316 PYCR2Q96C36 320 aa12.62□□□□□ -0.39
CSNK1D-211ENST00000579316 INTS12Q96CB8 462 aaKnown RBP12.62□□□□□ -0.39
CSNK1D-211ENST00000579316 FAR2Q96K12 515 aa12.62□□□□□ -0.39
CSNK1D-211ENST00000579316 SERPINB12Q96P63 405 aa12.62□□□□□ -0.39
CSNK1D-211ENST00000579316 QRFPRQ96P65 431 aa12.62□□□□□ -0.39
CSNK1D-211ENST00000579316 CSF3RQ99062 836 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms