RNA–Protein interactions for RNA: ENST00000578917.1

TRAF4-213, Transcript of TNF receptor associated factor 4, humanhuman

TSL 4

Gene TRAF4, Length 484 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-213ENST00000578917 ADAM29Q9UKF5 820 aa6.11□□□□□ -1.43
TRAF4-213ENST00000578917 PPT2Q9UMR5 302 aa6.11□□□□□ -1.43
TRAF4-213ENST00000578917 YARS2Q9Y2Z4 477 aaKnown RBP6.11□□□□□ -1.43
TRAF4-213ENST00000578917 PLLPQ9Y342 182 aa6.11□□□□□ -1.43
TRAF4-213ENST00000578917 FIS1Q9Y3D6 152 aa6.11□□□□□ -1.43
TRAF4-213ENST00000578917 ASB4Q9Y574 426 aa6.11□□□□□ -1.43
TRAF4-213ENST00000578917 TIMM22Q9Y584 194 aa6.11□□□□□ -1.43
TRAF4-213ENST00000578917 SPTAN1Q13813 2472 aaKnown RBP6.11□□□□□ -1.43
TRAF4-213ENST00000578917 SCN3AQ9NY46 2000 aa6.1□□□□□ -1.43
TRAF4-213ENST00000578917 USP9YO00507 2555 aaPredicted RBP6.1□□□□□ -1.43
TRAF4-213ENST00000578917 A0A1B0GTL3 188 aa6.1□□□□□ -1.43
TRAF4-213ENST00000578917 A8MVJ9 347 aa6.1□□□□□ -1.43
TRAF4-213ENST00000578917 H3BQF6 201 aa6.1□□□□□ -1.43
TRAF4-213ENST00000578917 KLRC4-KLRK1H3BQV0 150 aa6.1□□□□□ -1.43
TRAF4-213ENST00000578917 TGFBR3LH3BV60 316 aa6.1□□□□□ -1.43
TRAF4-213ENST00000578917 CDK2AP1O14519 115 aa6.1□□□□□ -1.43
TRAF4-213ENST00000578917 MAN1A2O60476 641 aa6.1□□□□□ -1.43
TRAF4-213ENST00000578917 TRIM13O60858 407 aa6.1□□□□□ -1.43
TRAF4-213ENST00000578917 SEC22BO75396 215 aa6.1□□□□□ -1.43
TRAF4-213ENST00000578917 CBX6O95503 412 aa6.1□□□□□ -1.43
TRAF4-213ENST00000578917 AIFM1O95831 613 aa6.1□□□□□ -1.43
TRAF4-213ENST00000578917 ANXA4P09525 319 aaPredicted RBP6.1□□□□□ -1.43
TRAF4-213ENST00000578917 SLC35E2P0CK97 266 aa6.1□□□□□ -1.43
TRAF4-213ENST00000578917 PORP16435 677 aaPredicted RBP6.1□□□□□ -1.43
TRAF4-213ENST00000578917 CSNK2A2P19784 350 aaPredicted RBP6.1□□□□□ -1.43
TRAF4-213ENST00000578917 NT5EP21589 574 aa6.1□□□□□ -1.43
TRAF4-213ENST00000578917 SERPINB3P29508 390 aa6.1□□□□□ -1.43
TRAF4-213ENST00000578917 UQCRFS1P47985 274 aa6.1□□□□□ -1.43
TRAF4-213ENST00000578917 CASP6P55212 293 aa6.1□□□□□ -1.43
TRAF4-213ENST00000578917 DNAJB13P59910 316 aa6.1□□□□□ -1.43
TRAF4-213ENST00000578917 RNF4P78317 190 aa6.1□□□□□ -1.43
TRAF4-213ENST00000578917 HMGCS1Q01581 520 aa6.1□□□□□ -1.43
TRAF4-213ENST00000578917 ALDH6A1Q02252 535 aaKnown RBP6.1□□□□□ -1.43
TRAF4-213ENST00000578917 SLC18A2Q05940 514 aa6.1□□□□□ -1.43
TRAF4-213ENST00000578917 RBPJQ06330 500 aa6.1□□□□□ -1.43
TRAF4-213ENST00000578917 CSTF3Q12996 717 aaKnown RBP6.1□□□□□ -1.43
TRAF4-213ENST00000578917 UBAP2LQ14157 1087 aaKnown RBP6.1□□□□□ -1.43
TRAF4-213ENST00000578917 SPIN4Q56A73 249 aa6.1□□□□□ -1.43
TRAF4-213ENST00000578917 TCHHL1Q5QJ38 904 aaPredicted RBP6.1□□□□□ -1.43
TRAF4-213ENST00000578917 CEP85LQ5SZL2 805 aa6.1□□□□□ -1.43
TRAF4-213ENST00000578917 LIPMQ5VYY2 423 aa6.1□□□□□ -1.43
TRAF4-213ENST00000578917 RPUSD3Q6P087 351 aaKnown RBP6.1□□□□□ -1.43
TRAF4-213ENST00000578917 OPN5Q6U736 354 aa6.1□□□□□ -1.43
TRAF4-213ENST00000578917 GFRALQ6UXV0 394 aa6.1□□□□□ -1.43
TRAF4-213ENST00000578917 C16orf47Q6ZP98 133 aaPredicted RBP6.1□□□□□ -1.43
TRAF4-213ENST00000578917 FRMD7Q6ZUT3 714 aa6.1□□□□□ -1.43
TRAF4-213ENST00000578917 SH2D5Q6ZV89 423 aa6.1□□□□□ -1.43
TRAF4-213ENST00000578917 SLC29A4Q7RTT9 530 aa6.1□□□□□ -1.43
TRAF4-213ENST00000578917 GALNTL5Q7Z4T8 443 aa6.1□□□□□ -1.43
TRAF4-213ENST00000578917 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.1□□□□□ -1.43
TRAF4-213ENST00000578917 CROCCP2Q86T23 111 aa6.1□□□□□ -1.43
TRAF4-213ENST00000578917 TRABD2AQ86V40 505 aa6.1□□□□□ -1.43
TRAF4-213ENST00000578917 ST13P4Q8IZP2 240 aaPredicted RBP6.1□□□□□ -1.43
TRAF4-213ENST00000578917 CYP4Z2PQ8N1L4 340 aa6.1□□□□□ -1.43
TRAF4-213ENST00000578917 FAM26EQ8N5C1 309 aa6.1□□□□□ -1.43
TRAF4-213ENST00000578917 BANPQ8N9N5 519 aa6.1□□□□□ -1.43
TRAF4-213ENST00000578917 APCDD1LQ8NCL9 501 aa6.1□□□□□ -1.43
TRAF4-213ENST00000578917 KLHL29Q96CT2 875 aa6.1□□□□□ -1.43
TRAF4-213ENST00000578917 APOPT1Q96IL0 206 aa6.1□□□□□ -1.43
TRAF4-213ENST00000578917 SIGLEC12Q96PQ1 595 aa6.1□□□□□ -1.43
TRAF4-213ENST00000578917 FAM111AQ96PZ2 611 aa6.1□□□□□ -1.43
TRAF4-213ENST00000578917 GAL3ST4Q96RP7 486 aa6.1□□□□□ -1.43
TRAF4-213ENST00000578917 KCNA7Q96RP8 456 aa6.1□□□□□ -1.43
TRAF4-213ENST00000578917 PAIP2Q9BPZ3 127 aaKnown RBP6.1□□□□□ -1.43
TRAF4-213ENST00000578917 STMN4Q9H169 189 aaPredicted RBP6.1□□□□□ -1.43
TRAF4-213ENST00000578917 GSTO2Q9H4Y5 243 aa6.1□□□□□ -1.43
TRAF4-213ENST00000578917 GIMAP4Q9NUV9 329 aa6.1□□□□□ -1.43
TRAF4-213ENST00000578917 HPF1Q9NWY4 346 aa6.1□□□□□ -1.43
TRAF4-213ENST00000578917 TEX10Q9NXF1 929 aaPredicted RBP6.1□□□□□ -1.43
TRAF4-213ENST00000578917 SENP1Q9P0U3 644 aa6.1□□□□□ -1.43
TRAF4-213ENST00000578917 MYOTQ9UBF9 498 aa6.1□□□□□ -1.43
TRAF4-213ENST00000578917 SEC14L3Q9UDX4 400 aa6.1□□□□□ -1.43
TRAF4-213ENST00000578917 BCAP29Q9UHQ4 241 aa6.1□□□□□ -1.43
TRAF4-213ENST00000578917 EMCNQ9ULC0 261 aa6.1□□□□□ -1.43
TRAF4-213ENST00000578917 OSGIN2Q9Y236 505 aa6.1□□□□□ -1.43
TRAF4-213ENST00000578917 NTNG1Q9Y2I2 539 aa6.1□□□□□ -1.43
TRAF4-213ENST00000578917 C2orf92A0A1B0GVN3 265 aa6.09□□□□□ -1.43
TRAF4-213ENST00000578917 C1orf226A1L170 272 aa6.09□□□□□ -1.43
TRAF4-213ENST00000578917 NPIPA5E9PKD4 350 aa6.09□□□□□ -1.43
TRAF4-213ENST00000578917 UBFD1O14562 309 aaKnown RBP6.09□□□□□ -1.43
TRAF4-213ENST00000578917 AZIN1O14977 448 aa6.09□□□□□ -1.43
TRAF4-213ENST00000578917 CTIFO43310 598 aaKnown RBP6.09□□□□□ -1.43
TRAF4-213ENST00000578917 RGS14O43566 566 aa6.09□□□□□ -1.43
TRAF4-213ENST00000578917 PEX1O43933 1283 aa6.09□□□□□ -1.43
TRAF4-213ENST00000578917 PCDH7O60245 1069 aa6.09□□□□□ -1.43
TRAF4-213ENST00000578917 UNC5CO95185 931 aa6.09□□□□□ -1.43
TRAF4-213ENST00000578917 DDAH2O95865 285 aa6.09□□□□□ -1.43
TRAF4-213ENST00000578917 P04436 131 aa6.09□□□□□ -1.43
TRAF4-213ENST00000578917 UROSP10746 265 aa6.09□□□□□ -1.43
TRAF4-213ENST00000578917 EDN3P14138 238 aa6.09□□□□□ -1.43
TRAF4-213ENST00000578917 CPMP14384 443 aa6.09□□□□□ -1.43
TRAF4-213ENST00000578917 DRD2P14416 443 aa6.09□□□□□ -1.43
TRAF4-213ENST00000578917 CHN1P15882 459 aa6.09□□□□□ -1.43
TRAF4-213ENST00000578917 ALDH3A1P30838 453 aa6.09□□□□□ -1.43
TRAF4-213ENST00000578917 MPIP34949 423 aa6.09□□□□□ -1.43
TRAF4-213ENST00000578917 TRHRP34981 398 aaPredicted RBP6.09□□□□□ -1.43
TRAF4-213ENST00000578917 FEN1P39748 380 aaKnown RBP6.09□□□□□ -1.43
TRAF4-213ENST00000578917 GPR143P51810 404 aa6.09□□□□□ -1.43
TRAF4-213ENST00000578917 TRA2BP62995 288 aaKnown RBP6.09□□□□□ -1.43
TRAF4-213ENST00000578917 ERVK-8P63133 956 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms