RNA–Protein interactions for RNA: ENST00000574501.1

SMG6-215, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

Gene SMG6, Length 2,419 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-215ENST00000574501 MTRF1O75570 445 aaKnown RBP13.71□□□□□ -0.21
SMG6-215ENST00000574501 RAB36O95755 333 aa13.71□□□□□ -0.21
SMG6-215ENST00000574501 RECKO95980 971 aa13.71□□□□□ -0.21
SMG6-215ENST00000574501 ANXA4P09525 319 aaPredicted RBP13.71□□□□□ -0.21
SMG6-215ENST00000574501 RRASP10301 218 aa13.71□□□□□ -0.21
SMG6-215ENST00000574501 RHCEP18577 417 aa13.71□□□□□ -0.21
SMG6-215ENST00000574501 IDSP22304 550 aa13.71□□□□□ -0.21
SMG6-215ENST00000574501 STOMP27105 288 aa13.71□□□□□ -0.21
SMG6-215ENST00000574501 SLC6A1P30531 599 aa13.71□□□□□ -0.21
SMG6-215ENST00000574501 IRS1P35568 1242 aa13.71□□□□□ -0.21
SMG6-215ENST00000574501 CTAG1AP78358 180 aa13.71□□□□□ -0.21
SMG6-215ENST00000574501 CDK6Q00534 326 aa13.71□□□□□ -0.21
SMG6-215ENST00000574501 COL28A1Q2UY09 1125 aa13.71□□□□□ -0.21
SMG6-215ENST00000574501 TMEM201Q5SNT2 666 aa13.71□□□□□ -0.21
SMG6-215ENST00000574501 BICRALQ6AI39 1079 aa13.71□□□□□ -0.21
SMG6-215ENST00000574501 QSOX2Q6ZRP7 698 aa13.71□□□□□ -0.21
SMG6-215ENST00000574501 USP45Q70EL2 814 aa13.71□□□□□ -0.21
SMG6-215ENST00000574501 TRILQ7L0X0 811 aa13.71□□□□□ -0.21
SMG6-215ENST00000574501 C16orf59Q7L2K0 433 aa13.71□□□□□ -0.21
SMG6-215ENST00000574501 CHMP1BQ7LBR1 199 aa13.71□□□□□ -0.21
SMG6-215ENST00000574501 SHFQ7M4L6 423 aa13.71□□□□□ -0.21
SMG6-215ENST00000574501 LRRC70Q7Z2Q7 622 aa13.71□□□□□ -0.21
SMG6-215ENST00000574501 GPAT4Q86UL3 456 aa13.71□□□□□ -0.21
SMG6-215ENST00000574501 C1orf52Q8N6N3 182 aaKnown RBP13.71□□□□□ -0.21
SMG6-215ENST00000574501 BMPERQ8N8U9 685 aa13.71□□□□□ -0.21
SMG6-215ENST00000574501 FCRL1Q96LA6 429 aa13.71□□□□□ -0.21
SMG6-215ENST00000574501 RBP7Q96R05 134 aa13.71□□□□□ -0.21
SMG6-215ENST00000574501 CLEC4MQ9H2X3 399 aaPredicted RBP13.71□□□□□ -0.21
SMG6-215ENST00000574501 NMRK2Q9NPI5 230 aa13.71□□□□□ -0.21
SMG6-215ENST00000574501 UBQLN2Q9UHD9 624 aa13.71□□□□□ -0.21
SMG6-215ENST00000574501 GSTK1Q9Y2Q3 226 aa13.71□□□□□ -0.21
SMG6-215ENST00000574501 TOR1AO14656 332 aa13.71□□□□□ -0.22
SMG6-215ENST00000574501 NUPL2O15504 423 aaKnown RBP13.71□□□□□ -0.22
SMG6-215ENST00000574501 C6orf47O95873 294 aa13.71□□□□□ -0.22
SMG6-215ENST00000574501 IFNA7P01567 189 aa13.71□□□□□ -0.22
SMG6-215ENST00000574501 GBAP04062 536 aa13.71□□□□□ -0.22
SMG6-215ENST00000574501 IFNW1P05000 195 aa13.71□□□□□ -0.22
SMG6-215ENST00000574501 SOX18P35713 384 aa13.71□□□□□ -0.22
SMG6-215ENST00000574501 WNT4P56705 351 aa13.71□□□□□ -0.22
SMG6-215ENST00000574501 RAB8AP61006 207 aa13.71□□□□□ -0.22
SMG6-215ENST00000574501 RAE1P78406 368 aaKnown RBP13.71□□□□□ -0.22
SMG6-215ENST00000574501 BCL2L1Q07817 233 aa13.71□□□□□ -0.22
SMG6-215ENST00000574501 RIN1Q13671 783 aa13.71□□□□□ -0.22
SMG6-215ENST00000574501 PUM1Q14671 1186 aaKnown RBP eCLIP13.71□□□□□ -0.22
SMG6-215ENST00000574501 CHRNA6Q15825 494 aa13.71□□□□□ -0.22
SMG6-215ENST00000574501 CLLU1Q5K131 121 aa13.71□□□□□ -0.22
SMG6-215ENST00000574501 OR8J1Q8NGP2 316 aa13.71□□□□□ -0.22
SMG6-215ENST00000574501 RBPMSQ93062 196 aaKnown RBP13.71□□□□□ -0.22
SMG6-215ENST00000574501 FBXW5Q969U6 566 aa13.71□□□□□ -0.22
SMG6-215ENST00000574501 TMED9Q9BVK6 235 aa13.71□□□□□ -0.22
SMG6-215ENST00000574501 TBC1D17Q9HA65 648 aa13.71□□□□□ -0.22
SMG6-215ENST00000574501 NUDT15Q9NV35 164 aa13.71□□□□□ -0.22
SMG6-215ENST00000574501 ZNF282Q9UDV7 671 aaPredicted RBP13.71□□□□□ -0.22
SMG6-215ENST00000574501 DIMT1Q9UNQ2 313 aaKnown RBP13.71□□□□□ -0.22
SMG6-215ENST00000574501 RUVBL1Q9Y265 456 aaKnown RBP13.71□□□□□ -0.22
SMG6-215ENST00000574501 PPP2R3BQ9Y5P8 575 aa13.71□□□□□ -0.22
SMG6-215ENST00000574501 LOC105369274A0A096LPK9 316 aa13.7□□□□□ -0.22
SMG6-215ENST00000574501 GNG14A0A1W2PPG7 69 aa13.7□□□□□ -0.22
SMG6-215ENST00000574501 C17orf102A2RUQ5 167 aa13.7□□□□□ -0.22
SMG6-215ENST00000574501 MGAT4DA6NG13 374 aa13.7□□□□□ -0.22
SMG6-215ENST00000574501 CXCL11O14625 94 aa13.7□□□□□ -0.22
SMG6-215ENST00000574501 CLDN7O95471 211 aa13.7□□□□□ -0.22
SMG6-215ENST00000574501 IGLV3-27P01718 113 aa13.7□□□□□ -0.22
SMG6-215ENST00000574501 HK1P19367 917 aa13.7□□□□□ -0.22
SMG6-215ENST00000574501 ITGALP20701 1170 aa13.7□□□□□ -0.22
SMG6-215ENST00000574501 OPRD1P41143 372 aa13.7□□□□□ -0.22
SMG6-215ENST00000574501 SMSP52788 366 aa13.7□□□□□ -0.22
SMG6-215ENST00000574501 IRF8Q02556 426 aa13.7□□□□□ -0.22
SMG6-215ENST00000574501 RPL6Q02878 288 aaKnown RBP13.7□□□□□ -0.22
SMG6-215ENST00000574501 C2orf80Q0P641 193 aa13.7□□□□□ -0.22
SMG6-215ENST00000574501 ILKQ13418 452 aa13.7□□□□□ -0.22
SMG6-215ENST00000574501 C9orf131Q5VYM1 1079 aa13.7□□□□□ -0.22
SMG6-215ENST00000574501 C12orf73Q69YU5 71 aa13.7□□□□□ -0.22
SMG6-215ENST00000574501 OR4N4Q8N0Y3 316 aa13.7□□□□□ -0.22
SMG6-215ENST00000574501 GPRC5AQ8NFJ5 357 aa13.7□□□□□ -0.22
SMG6-215ENST00000574501 CIDECQ96AQ7 238 aaPredicted RBP13.7□□□□□ -0.22
SMG6-215ENST00000574501 MS4A3Q96HJ5 214 aa13.7□□□□□ -0.22
SMG6-215ENST00000574501 LRR1Q96L50 414 aa13.7□□□□□ -0.22
SMG6-215ENST00000574501 TMEM161AQ9NX61 479 aa13.7□□□□□ -0.22
SMG6-215ENST00000574501 C2orf92A0A1B0GVN3 265 aa13.7□□□□□ -0.22
SMG6-215ENST00000574501 H3BNC9 293 aa13.7□□□□□ -0.22
SMG6-215ENST00000574501 PPM1BO75688 479 aa13.7□□□□□ -0.22
SMG6-215ENST00000574501 HRGP04196 525 aa13.7□□□□□ -0.22
SMG6-215ENST00000574501 RHOCP08134 193 aa13.7□□□□□ -0.22
SMG6-215ENST00000574501 HIST1H2AGP0C0S8 130 aaPredicted RBP13.7□□□□□ -0.22
SMG6-215ENST00000574501 NR2F6P10588 404 aa13.7□□□□□ -0.22
SMG6-215ENST00000574501 TFPIP10646 304 aa13.7□□□□□ -0.22
SMG6-215ENST00000574501 ANXA3P12429 323 aa13.7□□□□□ -0.22
SMG6-215ENST00000574501 JUPP14923 745 aa13.7□□□□□ -0.22
SMG6-215ENST00000574501 ELK1P19419 428 aa13.7□□□□□ -0.22
SMG6-215ENST00000574501 HIST1H2ADP20671 130 aa13.7□□□□□ -0.22
SMG6-215ENST00000574501 CCR7P32248 378 aa13.7□□□□□ -0.22
SMG6-215ENST00000574501 LRRC74AQ0VAA2 488 aa13.7□□□□□ -0.22
SMG6-215ENST00000574501 ADAM15Q13444 863 aa13.7□□□□□ -0.22
SMG6-215ENST00000574501 PLA1AQ53H76 456 aa13.7□□□□□ -0.22
SMG6-215ENST00000574501 XKR6Q5GH73 641 aa13.7□□□□□ -0.22
SMG6-215ENST00000574501 NCEH1Q6PIU2 408 aa13.7□□□□□ -0.22
SMG6-215ENST00000574501 C7orf57Q8NEG2 295 aa13.7□□□□□ -0.22
SMG6-215ENST00000574501 POF1BQ8WVV4 589 aa13.7□□□□□ -0.22
SMG6-215ENST00000574501 UFD1Q92890 307 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms