RNA–Protein interactions for RNA: ENST00000573989.1

TRAPPC1-206, Transcript of trafficking protein particle complex 1, humanhuman

TSL 2

Gene TRAPPC1, Length 436 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-206ENST00000573989 GALNSP34059 522 aa11.93□□□□□ -0.5
TRAPPC1-206ENST00000573989 ASMTP46597 345 aa11.93□□□□□ -0.5
TRAPPC1-206ENST00000573989 XKP51811 444 aa11.93□□□□□ -0.5
TRAPPC1-206ENST00000573989 RPL38P63173 70 aaKnown RBP11.93□□□□□ -0.5
TRAPPC1-206ENST00000573989 RAE1P78406 368 aaKnown RBP11.93□□□□□ -0.5
TRAPPC1-206ENST00000573989 ID2Q02363 134 aa11.93□□□□□ -0.5
TRAPPC1-206ENST00000573989 C2orf80Q0P641 193 aa11.93□□□□□ -0.5
TRAPPC1-206ENST00000573989 XKR7Q5GH72 579 aa11.93□□□□□ -0.5
TRAPPC1-206ENST00000573989 ABHD17BQ5VST6 288 aa11.93□□□□□ -0.5
TRAPPC1-206ENST00000573989 SLC48A1Q6P1K1 146 aa11.93□□□□□ -0.5
TRAPPC1-206ENST00000573989 Q6ZSR9 355 aa11.93□□□□□ -0.5
TRAPPC1-206ENST00000573989 IKBIPQ70UQ0 350 aa11.93□□□□□ -0.5
TRAPPC1-206ENST00000573989 ZADH2Q8N4Q0 377 aa11.93□□□□□ -0.5
TRAPPC1-206ENST00000573989 SIRT6Q8N6T7 355 aa11.93□□□□□ -0.5
TRAPPC1-206ENST00000573989 CDC26Q8NHZ8 85 aa11.93□□□□□ -0.5
TRAPPC1-206ENST00000573989 LRRC8CQ8TDW0 803 aa11.93□□□□□ -0.5
TRAPPC1-206ENST00000573989 ELP5Q8TE02 316 aa11.93□□□□□ -0.5
TRAPPC1-206ENST00000573989 KLHL29Q96CT2 875 aa11.93□□□□□ -0.5
TRAPPC1-206ENST00000573989 TUBGCP3Q96CW5 907 aa11.93□□□□□ -0.5
TRAPPC1-206ENST00000573989 C19orf60Q96EN9 201 aa11.93□□□□□ -0.5
TRAPPC1-206ENST00000573989 ZNF354BQ96LW1 612 aa11.93□□□□□ -0.5
TRAPPC1-206ENST00000573989 LMF1Q96S06 567 aa11.93□□□□□ -0.5
TRAPPC1-206ENST00000573989 SORT1Q99523 831 aa11.93□□□□□ -0.5
TRAPPC1-206ENST00000573989 DEFB126Q9BYW3 111 aa11.93□□□□□ -0.5
TRAPPC1-206ENST00000573989 MIEF1Q9NQG6 463 aa11.93□□□□□ -0.5
TRAPPC1-206ENST00000573989 INTS9Q9NV88 658 aaKnown RBP11.93□□□□□ -0.5
TRAPPC1-206ENST00000573989 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.93□□□□□ -0.5
TRAPPC1-206ENST00000573989 EHD3Q9NZN3 535 aa11.93□□□□□ -0.5
TRAPPC1-206ENST00000573989 PTGFRNQ9P2B2 879 aa11.93□□□□□ -0.5
TRAPPC1-206ENST00000573989 UTS2RQ9UKP6 389 aa11.93□□□□□ -0.5
TRAPPC1-206ENST00000573989 CCL27Q9Y4X3 112 aa11.93□□□□□ -0.5
TRAPPC1-206ENST00000573989 CLDN16Q9Y5I7 305 aa11.93□□□□□ -0.5
TRAPPC1-206ENST00000573989 PTGDR2Q9Y5Y4 395 aa11.93□□□□□ -0.5
TRAPPC1-206ENST00000573989 CNTRLQ7Z7A1 2325 aa11.93□□□□□ -0.5
TRAPPC1-206ENST00000573989 COL6A6A6NMZ7 2263 aa11.93□□□□□ -0.5
TRAPPC1-206ENST00000573989 CHD6Q8TD26 2715 aa11.92□□□□□ -0.5
TRAPPC1-206ENST00000573989 CPAMD8Q8IZJ3 1885 aa11.92□□□□□ -0.5
TRAPPC1-206ENST00000573989 DYTNA2CJ06 578 aa11.92□□□□□ -0.5
TRAPPC1-206ENST00000573989 TRPC5OSA6NMA1 111 aa11.92□□□□□ -0.5
TRAPPC1-206ENST00000573989 A8MUI8 341 aa11.92□□□□□ -0.5
TRAPPC1-206ENST00000573989 CDK2AP1O14519 115 aa11.92□□□□□ -0.5
TRAPPC1-206ENST00000573989 PRKRAO75569 313 aaKnown RBP11.92□□□□□ -0.5
TRAPPC1-206ENST00000573989 ERAL1O75616 437 aaKnown RBP11.92□□□□□ -0.5
TRAPPC1-206ENST00000573989 CPMP14384 443 aa11.92□□□□□ -0.5
TRAPPC1-206ENST00000573989 PORP16435 677 aaPredicted RBP11.92□□□□□ -0.5
TRAPPC1-206ENST00000573989 CSNK2A2P19784 350 aaPredicted RBP11.92□□□□□ -0.5
TRAPPC1-206ENST00000573989 NR1D1P20393 614 aa11.92□□□□□ -0.5
TRAPPC1-206ENST00000573989 DDCP20711 480 aa11.92□□□□□ -0.5
TRAPPC1-206ENST00000573989 HK2P52789 917 aa11.92□□□□□ -0.5
TRAPPC1-206ENST00000573989 KLRB1Q12918 225 aa11.92□□□□□ -0.5
TRAPPC1-206ENST00000573989 MFAP5Q13361 173 aa11.92□□□□□ -0.5
TRAPPC1-206ENST00000573989 KIAA0040Q15053 153 aa11.92□□□□□ -0.5
TRAPPC1-206ENST00000573989 PDCD2Q16342 344 aaPredicted RBP11.92□□□□□ -0.5
TRAPPC1-206ENST00000573989 MEP1AQ16819 746 aa11.92□□□□□ -0.5
TRAPPC1-206ENST00000573989 SMU1Q2TAY7 513 aa11.92□□□□□ -0.5
TRAPPC1-206ENST00000573989 SOWAHCQ53LP3 525 aaPredicted RBP11.92□□□□□ -0.5
TRAPPC1-206ENST00000573989 CES4AQ5XG92 561 aa11.92□□□□□ -0.5
TRAPPC1-206ENST00000573989 IGFL3Q6UXB1 125 aa11.92□□□□□ -0.5
TRAPPC1-206ENST00000573989 ARFGAP2Q8N6H7 521 aa11.92□□□□□ -0.5
TRAPPC1-206ENST00000573989 TEX19Q8NA77 164 aa11.92□□□□□ -0.5
TRAPPC1-206ENST00000573989 FNDC5Q8NAU1 212 aa11.92□□□□□ -0.5
TRAPPC1-206ENST00000573989 NFAM1Q8NET5 270 aaPredicted RBP11.92□□□□□ -0.5
TRAPPC1-206ENST00000573989 OR2T11Q8NH01 316 aa11.92□□□□□ -0.5
TRAPPC1-206ENST00000573989 ZNF75CPQ92670 426 aaPredicted RBP11.92□□□□□ -0.5
TRAPPC1-206ENST00000573989 RIT1Q92963 219 aa11.92□□□□□ -0.5
TRAPPC1-206ENST00000573989 NCLNQ969V3 563 aa11.92□□□□□ -0.5
TRAPPC1-206ENST00000573989 OR8D2Q9GZM6 311 aa11.92□□□□□ -0.5
TRAPPC1-206ENST00000573989 C20orf27Q9GZN8 174 aa11.92□□□□□ -0.5
TRAPPC1-206ENST00000573989 MYNNQ9NPC7 610 aa11.92□□□□□ -0.5
TRAPPC1-206ENST00000573989 MED4Q9NPJ6 270 aa11.92□□□□□ -0.5
TRAPPC1-206ENST00000573989 PPIEQ9UNP9 301 aaKnown RBP11.92□□□□□ -0.5
TRAPPC1-206ENST00000573989 ENTPD4Q9Y227 616 aa11.92□□□□□ -0.5
TRAPPC1-206ENST00000573989 HEMK1Q9Y5R4 338 aaPredicted RBP11.92□□□□□ -0.5
TRAPPC1-206ENST00000573989 ATRXP46100 2492 aa11.91□□□□□ -0.5
TRAPPC1-206ENST00000573989 TRBV11-1A0A0K0K1C0 115 aa11.91□□□□□ -0.5
TRAPPC1-206ENST00000573989 MYOCOSA0A1B0GUC4 107 aa11.91□□□□□ -0.5
TRAPPC1-206ENST00000573989 FCHO1O14526 889 aa11.91□□□□□ -0.5
TRAPPC1-206ENST00000573989 PEX11AO75192 247 aa11.91□□□□□ -0.5
TRAPPC1-206ENST00000573989 ZFAND5O76080 213 aa11.91□□□□□ -0.5
TRAPPC1-206ENST00000573989 CELA2AP08217 269 aa11.91□□□□□ -0.5
TRAPPC1-206ENST00000573989 RPL3P39023 403 aaKnown RBP11.91□□□□□ -0.5
TRAPPC1-206ENST00000573989 NFATC3Q12968 1075 aa11.91□□□□□ -0.5
TRAPPC1-206ENST00000573989 SPRED3Q2MJR0 410 aa11.91□□□□□ -0.5
TRAPPC1-206ENST00000573989 RFTN2Q52LD8 501 aaPredicted RBP11.91□□□□□ -0.5
TRAPPC1-206ENST00000573989 H3F3CQ6NXT2 135 aa11.91□□□□□ -0.5
TRAPPC1-206ENST00000573989 HSDL2Q6YN16 418 aa11.91□□□□□ -0.5
TRAPPC1-206ENST00000573989 ATG14Q6ZNE5 492 aa11.91□□□□□ -0.5
TRAPPC1-206ENST00000573989 LINC00696Q6ZRV3 163 aa11.91□□□□□ -0.5
TRAPPC1-206ENST00000573989 R3HCC1LQ7Z5L2 792 aaKnown RBP11.91□□□□□ -0.5
TRAPPC1-206ENST00000573989 CRLF3Q8IUI8 442 aa11.91□□□□□ -0.5
TRAPPC1-206ENST00000573989 GALNT12Q8IXK2 581 aa11.91□□□□□ -0.5
TRAPPC1-206ENST00000573989 LRRC34Q8IZ02 419 aa11.91□□□□□ -0.5
TRAPPC1-206ENST00000573989 LGI4Q8N135 537 aa11.91□□□□□ -0.5
TRAPPC1-206ENST00000573989 LRRC25Q8N386 305 aaPredicted RBP11.91□□□□□ -0.5
TRAPPC1-206ENST00000573989 OR5L2Q8NGL0 311 aa11.91□□□□□ -0.5
TRAPPC1-206ENST00000573989 OR1N1Q8NGS0 311 aa11.91□□□□□ -0.5
TRAPPC1-206ENST00000573989 SLC2A12Q8TD20 617 aa11.91□□□□□ -0.5
TRAPPC1-206ENST00000573989 PTPMT1Q8WUK0 201 aaPredicted RBP11.91□□□□□ -0.5
TRAPPC1-206ENST00000573989 BBC3Q96PG8 261 aaPredicted RBP11.91□□□□□ -0.5
TRAPPC1-206ENST00000573989 ZNF395Q9H8N7 513 aaPredicted RBP11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms