RNA–Protein interactions for RNA: ENST00000573827.1

SMG6-214, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 601 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-214ENST00000573827 BNC2Q6ZN30 1099 aaPredicted RBP16.13■□□□□ 0.17
SMG6-214ENST00000573827 TAOK1Q7L7X3 1001 aa16.13■□□□□ 0.17
SMG6-214ENST00000573827 MRGPRGQ86SM5 289 aa16.13■□□□□ 0.17
SMG6-214ENST00000573827 DOLPP1Q86YN1 238 aa16.13■□□□□ 0.17
SMG6-214ENST00000573827 ST13P4Q8IZP2 240 aaPredicted RBP16.13■□□□□ 0.17
SMG6-214ENST00000573827 ZNF808Q8N4W9 903 aaPredicted RBP16.13■□□□□ 0.17
SMG6-214ENST00000573827 OR4F6Q8NGB9 312 aa16.13■□□□□ 0.17
SMG6-214ENST00000573827 KIF18AQ8NI77 898 aa16.13■□□□□ 0.17
SMG6-214ENST00000573827 NUBPLQ8TB37 319 aa16.13■□□□□ 0.17
SMG6-214ENST00000573827 FBXL20Q96IG2 436 aa16.13■□□□□ 0.17
SMG6-214ENST00000573827 MAGED4Q96JG8 741 aa16.13■□□□□ 0.17
SMG6-214ENST00000573827 PHF12Q96QT6 1004 aa16.13■□□□□ 0.17
SMG6-214ENST00000573827 DMRTA2Q96SC8 542 aa16.13■□□□□ 0.17
SMG6-214ENST00000573827 CENPKQ9BS16 269 aa16.13■□□□□ 0.17
SMG6-214ENST00000573827 TIMMDC1Q9NPL8 285 aa16.13■□□□□ 0.17
SMG6-214ENST00000573827 TEX10Q9NXF1 929 aaPredicted RBP16.13■□□□□ 0.17
SMG6-214ENST00000573827 MEMO1Q9Y316 297 aa16.13■□□□□ 0.17
SMG6-214ENST00000573827 KLF2Q9Y5W3 355 aaPredicted RBP16.13■□□□□ 0.17
SMG6-214ENST00000573827 IKBKGQ9Y6K9 419 aa16.13■□□□□ 0.17
SMG6-214ENST00000573827 TEP1Q99973 2627 aaKnown RBP16.13■□□□□ 0.17
SMG6-214ENST00000573827 EXOC1LA0A1B0GW35 172 aa16.12■□□□□ 0.17
SMG6-214ENST00000573827 GLOD5A6NK44 160 aa16.12■□□□□ 0.17
SMG6-214ENST00000573827 A8MVJ9 347 aa16.12■□□□□ 0.17
SMG6-214ENST00000573827 PGRMC2O15173 223 aa16.12■□□□□ 0.17
SMG6-214ENST00000573827 HS6ST1O60243 411 aa16.12■□□□□ 0.17
SMG6-214ENST00000573827 GBAP04062 536 aa16.12■□□□□ 0.17
SMG6-214ENST00000573827 NR2F6P10588 404 aa16.12■□□□□ 0.17
SMG6-214ENST00000573827 ALOX15P16050 662 aaPredicted RBP16.12■□□□□ 0.17
SMG6-214ENST00000573827 TNNI3P19429 210 aa16.12■□□□□ 0.17
SMG6-214ENST00000573827 CCNG1P51959 295 aa16.12■□□□□ 0.17
SMG6-214ENST00000573827 FOXO1Q12778 655 aa16.12■□□□□ 0.17
SMG6-214ENST00000573827 BIKQ13323 160 aa16.12■□□□□ 0.17
SMG6-214ENST00000573827 ZNF750Q32MQ0 723 aa16.12■□□□□ 0.17
SMG6-214ENST00000573827 C10orf62Q5T681 223 aaPredicted RBP16.12■□□□□ 0.17
SMG6-214ENST00000573827 MTFR2Q6P444 385 aa16.12■□□□□ 0.17
SMG6-214ENST00000573827 IL20RBQ6UXL0 311 aa16.12■□□□□ 0.17
SMG6-214ENST00000573827 RPTNQ6XPR3 784 aa16.12■□□□□ 0.17
SMG6-214ENST00000573827 NCCRP1Q6ZVX7 275 aaPredicted RBP16.12■□□□□ 0.17
SMG6-214ENST00000573827 TRMT10CQ7L0Y3 403 aaKnown RBP16.12■□□□□ 0.17
SMG6-214ENST00000573827 NUDT13Q86X67 352 aa16.12■□□□□ 0.17
SMG6-214ENST00000573827 TICAM1Q8IUC6 712 aa16.12■□□□□ 0.17
SMG6-214ENST00000573827 CEP112Q8N8E3 955 aa16.12■□□□□ 0.17
SMG6-214ENST00000573827 C7orf57Q8NEG2 295 aa16.12■□□□□ 0.17
SMG6-214ENST00000573827 OR2M7Q8NG81 312 aa16.12■□□□□ 0.17
SMG6-214ENST00000573827 OR52N2Q8NGI0 321 aa16.12■□□□□ 0.17
SMG6-214ENST00000573827 DOK4Q8TEW6 326 aa16.12■□□□□ 0.17
SMG6-214ENST00000573827 ASB15Q8WXK1 588 aa16.12■□□□□ 0.17
SMG6-214ENST00000573827 DGAT2Q96PD7 388 aa16.12■□□□□ 0.17
SMG6-214ENST00000573827 SERPINI1Q99574 410 aa16.12■□□□□ 0.17
SMG6-214ENST00000573827 ZDHHC11Q9H8X9 412 aa16.12■□□□□ 0.17
SMG6-214ENST00000573827 SEMA4BQ9NPR2 832 aaPredicted RBP16.12■□□□□ 0.17
SMG6-214ENST00000573827 FARSBQ9NSD9 589 aaKnown RBP16.12■□□□□ 0.17
SMG6-214ENST00000573827 HPF1Q9NWY4 346 aa16.12■□□□□ 0.17
SMG6-214ENST00000573827 TMEM216Q9P0N5 145 aa16.12■□□□□ 0.17
SMG6-214ENST00000573827 SUCOQ9UBS9 1254 aaKnown RBP16.12■□□□□ 0.17
SMG6-214ENST00000573827 SMIM24O75264 130 aa16.11■□□□□ 0.17
SMG6-214ENST00000573827 PRF1P14222 555 aa16.11■□□□□ 0.17
SMG6-214ENST00000573827 GALNSP34059 522 aa16.11■□□□□ 0.17
SMG6-214ENST00000573827 BUD31P41223 144 aaPredicted RBP16.11■□□□□ 0.17
SMG6-214ENST00000573827 CDH13P55290 713 aa16.11■□□□□ 0.17
SMG6-214ENST00000573827 SLC37A1P57057 533 aa16.11■□□□□ 0.17
SMG6-214ENST00000573827 PHEXP78562 749 aa16.11■□□□□ 0.17
SMG6-214ENST00000573827 PLIN5Q00G26 463 aa16.11■□□□□ 0.17
SMG6-214ENST00000573827 GALNT1Q10472 559 aaPredicted RBP16.11■□□□□ 0.17
SMG6-214ENST00000573827 ZNF791Q3KP31 576 aaPredicted RBP16.11■□□□□ 0.17
SMG6-214ENST00000573827 UNC50Q53HI1 259 aa16.11■□□□□ 0.17
SMG6-214ENST00000573827 IFT20Q8IY31 132 aa16.11■□□□□ 0.17
SMG6-214ENST00000573827 SLC34A3Q8N130 599 aa16.11■□□□□ 0.17
SMG6-214ENST00000573827 METTL4Q8N3J2 472 aa16.11■□□□□ 0.17
SMG6-214ENST00000573827 ZNF441Q8N8Z8 693 aa16.11■□□□□ 0.17
SMG6-214ENST00000573827 GOLM1Q8NBJ4 401 aa16.11■□□□□ 0.17
SMG6-214ENST00000573827 OR5L2Q8NGL0 311 aa16.11■□□□□ 0.17
SMG6-214ENST00000573827 AGAP11Q8TF27 550 aa16.11■□□□□ 0.17
SMG6-214ENST00000573827 MTFMTQ96DP5 389 aaKnown RBP16.11■□□□□ 0.17
SMG6-214ENST00000573827 MRPL1Q9BYD6 325 aaKnown RBP16.11■□□□□ 0.17
SMG6-214ENST00000573827 FETUBQ9UGM5 382 aa16.11■□□□□ 0.17
SMG6-214ENST00000573827 ADAM29Q9UKF5 820 aa16.11■□□□□ 0.17
SMG6-214ENST00000573827 ERVK-11Q9UQG0 969 aa16.11■□□□□ 0.17
SMG6-214ENST00000573827 A0A1B0GTH9 108 aa16.1■□□□□ 0.17
SMG6-214ENST00000573827 TFECO14948 347 aaPredicted RBP16.1■□□□□ 0.17
SMG6-214ENST00000573827 DLX3O60479 287 aa16.1■□□□□ 0.17
SMG6-214ENST00000573827 SLC35E2P0CK97 266 aa16.1■□□□□ 0.17
SMG6-214ENST00000573827 CCL3P10147 92 aa16.1■□□□□ 0.17
SMG6-214ENST00000573827 COX7A2P14406 83 aa16.1■□□□□ 0.17
SMG6-214ENST00000573827 TSPAN8P19075 237 aa16.1■□□□□ 0.17
SMG6-214ENST00000573827 AGAP20933 346 aa16.1■□□□□ 0.17
SMG6-214ENST00000573827 TLX1P31314 330 aaPredicted RBP16.1■□□□□ 0.17
SMG6-214ENST00000573827 SOX18P35713 384 aa16.1■□□□□ 0.17
SMG6-214ENST00000573827 HSD17B3P37058 310 aa16.1■□□□□ 0.17
SMG6-214ENST00000573827 TBL3Q12788 808 aaKnown RBP16.1■□□□□ 0.17
SMG6-214ENST00000573827 ASPHQ12797 758 aa16.1■□□□□ 0.17
SMG6-214ENST00000573827 ZNF630Q2M218 657 aaPredicted RBP16.1■□□□□ 0.17
SMG6-214ENST00000573827 EMC4Q5J8M3 183 aa16.1■□□□□ 0.17
SMG6-214ENST00000573827 SP5Q6BEB4 398 aaPredicted RBP16.1■□□□□ 0.17
SMG6-214ENST00000573827 RTL4Q6ZR62 310 aa16.1■□□□□ 0.17
SMG6-214ENST00000573827 SH2D5Q6ZV89 423 aa16.1■□□□□ 0.17
SMG6-214ENST00000573827 MILR1Q7Z6M3 343 aa16.1■□□□□ 0.17
SMG6-214ENST00000573827 MYRIPQ8NFW9 859 aa16.1■□□□□ 0.17
SMG6-214ENST00000573827 PHF10Q8WUB8 498 aaKnown RBP16.1■□□□□ 0.17
SMG6-214ENST00000573827 ATP6V1E2Q96A05 226 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms