RNA–Protein interactions for RNA: ENST00000573474.5

CCDC40-209, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 554 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-209ENST00000573474 MYO15AQ9UKN7 3530 aa12.87□□□□□ -0.35
CCDC40-209ENST00000573474 A8MUI8 341 aa12.87□□□□□ -0.35
CCDC40-209ENST00000573474 B4E171 279 aa12.87□□□□□ -0.35
CCDC40-209ENST00000573474 AGRPO00253 132 aa12.87□□□□□ -0.35
CCDC40-209ENST00000573474 POLR1CO15160 346 aaPredicted RBP12.87□□□□□ -0.35
CCDC40-209ENST00000573474 FGF17O60258 216 aa12.87□□□□□ -0.35
CCDC40-209ENST00000573474 CTNSO60931 367 aa12.87□□□□□ -0.35
CCDC40-209ENST00000573474 SCRG1O75711 98 aa12.87□□□□□ -0.35
CCDC40-209ENST00000573474 FHP07954 510 aa12.87□□□□□ -0.35
CCDC40-209ENST00000573474 CDK4P11802 303 aa12.87□□□□□ -0.35
CCDC40-209ENST00000573474 CPMP14384 443 aa12.87□□□□□ -0.35
CCDC40-209ENST00000573474 GPX2P18283 190 aa12.87□□□□□ -0.35
CCDC40-209ENST00000573474 FBLP22087 321 aaKnown RBP12.87□□□□□ -0.35
CCDC40-209ENST00000573474 HTR1EP28566 365 aa12.87□□□□□ -0.35
CCDC40-209ENST00000573474 GPC1P35052 558 aa12.87□□□□□ -0.35
CCDC40-209ENST00000573474 MSX2P35548 267 aaPredicted RBP12.87□□□□□ -0.35
CCDC40-209ENST00000573474 SOAT1P35610 550 aa12.87□□□□□ -0.35
CCDC40-209ENST00000573474 CHI3L1P36222 383 aaPredicted RBP12.87□□□□□ -0.35
CCDC40-209ENST00000573474 TSPAN7P41732 249 aa12.87□□□□□ -0.35
CCDC40-209ENST00000573474 XCR1P46094 333 aa12.87□□□□□ -0.35
CCDC40-209ENST00000573474 OR1D4P47884 311 aa12.87□□□□□ -0.35
CCDC40-209ENST00000573474 INSM1Q01101 510 aaPredicted RBP12.87□□□□□ -0.35
CCDC40-209ENST00000573474 FOLH1Q04609 750 aa12.87□□□□□ -0.35
CCDC40-209ENST00000573474 ABHD18Q0P651 414 aa12.87□□□□□ -0.35
CCDC40-209ENST00000573474 BNIP2Q12982 314 aa12.87□□□□□ -0.35
CCDC40-209ENST00000573474 KPNB1Q14974 876 aaKnown RBP12.87□□□□□ -0.35
CCDC40-209ENST00000573474 TRIP6Q15654 476 aaKnown RBP12.87□□□□□ -0.35
CCDC40-209ENST00000573474 SYT16Q17RD7 645 aa12.87□□□□□ -0.35
CCDC40-209ENST00000573474 SPDYE7PQ495Y7 208 aa12.87□□□□□ -0.35
CCDC40-209ENST00000573474 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.87□□□□□ -0.35
CCDC40-209ENST00000573474 CDCP2Q5VXM1 449 aa12.87□□□□□ -0.35
CCDC40-209ENST00000573474 PWWP2BQ6NUJ5 590 aa12.87□□□□□ -0.35
CCDC40-209ENST00000573474 GLRX5Q86SX6 157 aa12.87□□□□□ -0.35
CCDC40-209ENST00000573474 IFNEQ86WN2 208 aa12.87□□□□□ -0.35
CCDC40-209ENST00000573474 CALHM3Q86XJ0 350 aa12.87□□□□□ -0.35
CCDC40-209ENST00000573474 OR4N5Q8IXE1 308 aa12.87□□□□□ -0.35
CCDC40-209ENST00000573474 SHISA5Q8N114 240 aa12.87□□□□□ -0.35
CCDC40-209ENST00000573474 BMPERQ8N8U9 685 aa12.87□□□□□ -0.35
CCDC40-209ENST00000573474 FAM156AQ8NDB6 213 aa12.87□□□□□ -0.35
CCDC40-209ENST00000573474 TNIP2Q8NFZ5 429 aa12.87□□□□□ -0.35
CCDC40-209ENST00000573474 OR10A6Q8NH74 314 aa12.87□□□□□ -0.35
CCDC40-209ENST00000573474 SUN3Q8TAQ9 357 aa12.87□□□□□ -0.35
CCDC40-209ENST00000573474 COL26A1Q96A83 441 aa12.87□□□□□ -0.35
CCDC40-209ENST00000573474 ANKRD9Q96BM1 317 aaPredicted RBP12.87□□□□□ -0.35
CCDC40-209ENST00000573474 ASB9Q96DX5 294 aa12.87□□□□□ -0.35
CCDC40-209ENST00000573474 FAM120BQ96EK7 910 aaKnown RBP12.87□□□□□ -0.35
CCDC40-209ENST00000573474 ZNF583Q96ND8 569 aa12.87□□□□□ -0.35
CCDC40-209ENST00000573474 CMKLR1Q99788 373 aa12.87□□□□□ -0.35
CCDC40-209ENST00000573474 YIPF2Q9BWQ6 316 aa12.87□□□□□ -0.35
CCDC40-209ENST00000573474 MUC13Q9H3R2 512 aa12.87□□□□□ -0.35
CCDC40-209ENST00000573474 SIRT3Q9NTG7 399 aaPredicted RBP12.87□□□□□ -0.35
CCDC40-209ENST00000573474 GMPR2Q9P2T1 348 aaKnown RBP12.87□□□□□ -0.35
CCDC40-209ENST00000573474 MAP4K5Q9Y4K4 846 aa12.87□□□□□ -0.35
CCDC40-209ENST00000573474 WDR87Q6ZQQ6 2873 aa12.87□□□□□ -0.35
CCDC40-209ENST00000573474 ADAMTS20P59510 1910 aa12.86□□□□□ -0.35
CCDC40-209ENST00000573474 RNF103-CHMP3A0A140T963 221 aa12.86□□□□□ -0.35
CCDC40-209ENST00000573474 ACOT8O14734 319 aa12.86□□□□□ -0.35
CCDC40-209ENST00000573474 HYAL3O43820 417 aaPredicted RBP12.86□□□□□ -0.35
CCDC40-209ENST00000573474 B4GALT2O60909 372 aa12.86□□□□□ -0.35
CCDC40-209ENST00000573474 LDB3O75112 727 aa12.86□□□□□ -0.35
CCDC40-209ENST00000573474 BCAS2O75934 225 aaPredicted RBP12.86□□□□□ -0.35
CCDC40-209ENST00000573474 STAMBPO95630 424 aa12.86□□□□□ -0.35
CCDC40-209ENST00000573474 NTRK1P04629 796 aa12.86□□□□□ -0.35
CCDC40-209ENST00000573474 CCT3P49368 545 aaKnown RBP12.86□□□□□ -0.35
CCDC40-209ENST00000573474 CDK9P50750 372 aaKnown RBP12.86□□□□□ -0.35
CCDC40-209ENST00000573474 GZMMP51124 257 aa12.86□□□□□ -0.35
CCDC40-209ENST00000573474 LIMK1P53667 647 aa12.86□□□□□ -0.35
CCDC40-209ENST00000573474 HSD17B7P56937 341 aa12.86□□□□□ -0.35
CCDC40-209ENST00000573474 ACTR3P61158 418 aa12.86□□□□□ -0.35
CCDC40-209ENST00000573474 MS4A2Q01362 244 aa12.86□□□□□ -0.35
CCDC40-209ENST00000573474 DUSP2Q05923 314 aa12.86□□□□□ -0.35
CCDC40-209ENST00000573474 VAC14Q08AM6 782 aa12.86□□□□□ -0.35
CCDC40-209ENST00000573474 BIKQ13323 160 aa12.86□□□□□ -0.35
CCDC40-209ENST00000573474 ARHGAP40Q5TG30 622 aa12.86□□□□□ -0.35
CCDC40-209ENST00000573474 C1orf189Q5VU69 101 aa12.86□□□□□ -0.35
CCDC40-209ENST00000573474 TMEM64Q6YI46 380 aa12.86□□□□□ -0.35
CCDC40-209ENST00000573474 GPR155Q7Z3F1 870 aa12.86□□□□□ -0.35
CCDC40-209ENST00000573474 SERPINA11Q86U17 422 aa12.86□□□□□ -0.35
CCDC40-209ENST00000573474 CLEC4FQ8N1N0 589 aa12.86□□□□□ -0.35
CCDC40-209ENST00000573474 OR2T12Q8NG77 320 aa12.86□□□□□ -0.35
CCDC40-209ENST00000573474 OR52N2Q8NGI0 321 aa12.86□□□□□ -0.35
CCDC40-209ENST00000573474 SFXN5Q8TD22 340 aa12.86□□□□□ -0.35
CCDC40-209ENST00000573474 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.86□□□□□ -0.35
CCDC40-209ENST00000573474 MOAP1Q96BY2 351 aa12.86□□□□□ -0.35
CCDC40-209ENST00000573474 CLIP3Q96DZ5 547 aa12.86□□□□□ -0.35
CCDC40-209ENST00000573474 NEURL3Q96EH8 262 aa12.86□□□□□ -0.35
CCDC40-209ENST00000573474 OR1F2PQ96R84 312 aa12.86□□□□□ -0.35
CCDC40-209ENST00000573474 SPATA9Q9BWV2 254 aa12.86□□□□□ -0.35
CCDC40-209ENST00000573474 PIF1Q9H611 641 aa12.86□□□□□ -0.35
CCDC40-209ENST00000573474 EPS8L2Q9H6S3 715 aa12.86□□□□□ -0.35
CCDC40-209ENST00000573474 APMAPQ9HDC9 416 aa12.86□□□□□ -0.35
CCDC40-209ENST00000573474 PRTFDC1Q9NRG1 225 aa12.86□□□□□ -0.35
CCDC40-209ENST00000573474 TOR4AQ9NXH8 423 aa12.86□□□□□ -0.35
CCDC40-209ENST00000573474 TRPC4Q9UBN4 977 aa12.86□□□□□ -0.35
CCDC40-209ENST00000573474 CUL9Q8IWT3 2517 aa12.85□□□□□ -0.35
CCDC40-209ENST00000573474 CROCCQ5TZA2 2017 aa12.85□□□□□ -0.35
CCDC40-209ENST00000573474 A0A1W2PS29 197 aa12.85□□□□□ -0.35
CCDC40-209ENST00000573474 FAM220BPB1ANY3 271 aa12.85□□□□□ -0.35
CCDC40-209ENST00000573474 MGRN1O60291 552 aa12.85□□□□□ -0.35
CCDC40-209ENST00000573474 TIAF1O95411 115 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms