RNA–Protein interactions for RNA: ENST00000572750.1

CHD3-215, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 750 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-215ENST00000572750 NR6A1Q15406 480 aa14.76□□□□□ -0.05
CHD3-215ENST00000572750 TERF2Q15554 542 aa14.76□□□□□ -0.05
CHD3-215ENST00000572750 ELAVL1Q15717 326 aaKnown RBP14.76□□□□□ -0.05
CHD3-215ENST00000572750 UGT3A2Q3SY77 523 aa14.76□□□□□ -0.05
CHD3-215ENST00000572750 JMJD6Q6NYC1 403 aaPredicted RBP14.76□□□□□ -0.05
CHD3-215ENST00000572750 CLYBLQ8N0X4 340 aa14.76□□□□□ -0.05
CHD3-215ENST00000572750 ZNF781Q8N8C0 355 aa14.76□□□□□ -0.05
CHD3-215ENST00000572750 NFAM1Q8NET5 270 aaPredicted RBP14.76□□□□□ -0.05
CHD3-215ENST00000572750 DNAJB14Q8TBM8 379 aa14.76□□□□□ -0.05
CHD3-215ENST00000572750 M1APQ8TC57 530 aa14.76□□□□□ -0.05
CHD3-215ENST00000572750 TM4SF18Q96CE8 201 aa14.76□□□□□ -0.05
CHD3-215ENST00000572750 C11orf24Q96F05 449 aaPredicted RBP14.76□□□□□ -0.05
CHD3-215ENST00000572750 KCNK13Q9HB14 408 aa14.76□□□□□ -0.05
CHD3-215ENST00000572750 ZNF446Q9NWS9 450 aa14.76□□□□□ -0.05
CHD3-215ENST00000572750 VTI1BQ9UEU0 232 aa14.76□□□□□ -0.05
CHD3-215ENST00000572750 ITPR3Q14573 2671 aa14.75□□□□□ -0.05
CHD3-215ENST00000572750 A8MUI8 341 aa14.75□□□□□ -0.05
CHD3-215ENST00000572750 SLC28A1O00337 649 aa14.75□□□□□ -0.05
CHD3-215ENST00000572750 RGS14O43566 566 aa14.75□□□□□ -0.05
CHD3-215ENST00000572750 JUNP05412 331 aaKnown RBP14.75□□□□□ -0.05
CHD3-215ENST00000572750 ANXA4P09525 319 aaPredicted RBP14.75□□□□□ -0.05
CHD3-215ENST00000572750 GRK2P25098 689 aa14.75□□□□□ -0.05
CHD3-215ENST00000572750 STT3AP46977 705 aa14.75□□□□□ -0.05
CHD3-215ENST00000572750 SLC1A6P48664 564 aa14.75□□□□□ -0.05
CHD3-215ENST00000572750 ALDH9A1P49189 494 aa14.75□□□□□ -0.05
CHD3-215ENST00000572750 TAS2R50P59544 299 aa14.75□□□□□ -0.05
CHD3-215ENST00000572750 AP2B1P63010 937 aa14.75□□□□□ -0.05
CHD3-215ENST00000572750 RPL38P63173 70 aaKnown RBP14.75□□□□□ -0.05
CHD3-215ENST00000572750 PLIN5Q00G26 463 aa14.75□□□□□ -0.05
CHD3-215ENST00000572750 TLE1Q04724 770 aa14.75□□□□□ -0.05
CHD3-215ENST00000572750 STX3Q13277 289 aa14.75□□□□□ -0.05
CHD3-215ENST00000572750 NADK2Q4G0N4 442 aa14.75□□□□□ -0.05
CHD3-215ENST00000572750 CRB2Q5IJ48 1285 aa14.75□□□□□ -0.05
CHD3-215ENST00000572750 GALNT18Q6P9A2 607 aa14.75□□□□□ -0.05
CHD3-215ENST00000572750 DGAT2L6Q6ZPD8 337 aa14.75□□□□□ -0.05
CHD3-215ENST00000572750 RNF165Q6ZSG1 346 aa14.75□□□□□ -0.05
CHD3-215ENST00000572750 APCDD1LQ8NCL9 501 aa14.75□□□□□ -0.05
CHD3-215ENST00000572750 B3GNT7Q8NFL0 401 aa14.75□□□□□ -0.05
CHD3-215ENST00000572750 OR14A16Q8NHC5 309 aa14.75□□□□□ -0.05
CHD3-215ENST00000572750 NCLNQ969V3 563 aa14.75□□□□□ -0.05
CHD3-215ENST00000572750 PPWD1Q96BP3 646 aaKnown RBP14.75□□□□□ -0.05
CHD3-215ENST00000572750 DGAT2Q96PD7 388 aa14.75□□□□□ -0.05
CHD3-215ENST00000572750 SORT1Q99523 831 aa14.75□□□□□ -0.05
CHD3-215ENST00000572750 MFRPQ9BY79 579 aa14.75□□□□□ -0.05
CHD3-215ENST00000572750 LRTM1Q9HBL6 345 aa14.75□□□□□ -0.05
CHD3-215ENST00000572750 HEY2Q9UBP5 337 aa14.75□□□□□ -0.05
CHD3-215ENST00000572750 GIMAP2Q9UG22 337 aa14.75□□□□□ -0.05
CHD3-215ENST00000572750 PCDHGB7Q9Y5F8 929 aa14.75□□□□□ -0.05
CHD3-215ENST00000572750 PCDHA9Q9Y5H5 950 aa14.75□□□□□ -0.05
CHD3-215ENST00000572750 CSAG2Q9Y5P2 127 aa14.75□□□□□ -0.05
CHD3-215ENST00000572750 CLCA3PQ9Y6N3 262 aa14.75□□□□□ -0.05
CHD3-215ENST00000572750 TRBV11-1A0A0K0K1C0 115 aa14.74□□□□□ -0.05
CHD3-215ENST00000572750 C1orf226A1L170 272 aa14.74□□□□□ -0.05
CHD3-215ENST00000572750 SYNDIG1LA6NDD5 238 aa14.74□□□□□ -0.05
CHD3-215ENST00000572750 C17orf105B2RV13 164 aa14.74□□□□□ -0.05
CHD3-215ENST00000572750 LSM1O15116 133 aaKnown RBP14.74□□□□□ -0.05
CHD3-215ENST00000572750 OR10H2O60403 315 aa14.74□□□□□ -0.05
CHD3-215ENST00000572750 MAN1A2O60476 641 aa14.74□□□□□ -0.05
CHD3-215ENST00000572750 KLHL41O60662 606 aa14.74□□□□□ -0.05
CHD3-215ENST00000572750 GUCY1B2O75343 617 aa14.74□□□□□ -0.05
CHD3-215ENST00000572750 SEC22BO75396 215 aa14.74□□□□□ -0.05
CHD3-215ENST00000572750 GPR75O95800 540 aa14.74□□□□□ -0.05
CHD3-215ENST00000572750 F10P00742 488 aa14.74□□□□□ -0.05
CHD3-215ENST00000572750 ALOX15P16050 662 aaPredicted RBP14.74□□□□□ -0.05
CHD3-215ENST00000572750 PRPH2P23942 346 aa14.74□□□□□ -0.05
CHD3-215ENST00000572750 ZNF763Q0D2J5 394 aa14.74□□□□□ -0.05
CHD3-215ENST00000572750 MFAP5Q13361 173 aa14.74□□□□□ -0.05
CHD3-215ENST00000572750 PDCD2Q16342 344 aaPredicted RBP14.74□□□□□ -0.05
CHD3-215ENST00000572750 GALNTL6Q49A17 601 aa14.74□□□□□ -0.05
CHD3-215ENST00000572750 XKR7Q5GH72 579 aa14.74□□□□□ -0.05
CHD3-215ENST00000572750 FAM180BQ6P0A1 224 aa14.74□□□□□ -0.05
CHD3-215ENST00000572750 SLC48A1Q6P1K1 146 aa14.74□□□□□ -0.05
CHD3-215ENST00000572750 ISLR2Q6UXK2 745 aa14.74□□□□□ -0.05
CHD3-215ENST00000572750 Q6ZSR9 355 aa14.74□□□□□ -0.05
CHD3-215ENST00000572750 RBMXL3Q8N7X1 1067 aaKnown RBP14.74□□□□□ -0.05
CHD3-215ENST00000572750 ZNF321PQ8N8H1 164 aa14.74□□□□□ -0.05
CHD3-215ENST00000572750 ELP5Q8TE02 316 aa14.74□□□□□ -0.05
CHD3-215ENST00000572750 DOK4Q8TEW6 326 aa14.74□□□□□ -0.05
CHD3-215ENST00000572750 C16orf78Q8WTQ4 265 aa14.74□□□□□ -0.05
CHD3-215ENST00000572750 PTPMT1Q8WUK0 201 aaPredicted RBP14.74□□□□□ -0.05
CHD3-215ENST00000572750 KLHL29Q96CT2 875 aa14.74□□□□□ -0.05
CHD3-215ENST00000572750 NPAS2Q99743 824 aa14.74□□□□□ -0.05
CHD3-215ENST00000572750 FAIM2Q9BWQ8 316 aa14.74□□□□□ -0.05
CHD3-215ENST00000572750 OR8D2Q9GZM6 311 aa14.74□□□□□ -0.05
CHD3-215ENST00000572750 EPS8L2Q9H6S3 715 aa14.74□□□□□ -0.05
CHD3-215ENST00000572750 C1orf109Q9NX04 203 aa14.74□□□□□ -0.05
CHD3-215ENST00000572750 LUZP4Q9P127 313 aa14.74□□□□□ -0.05
CHD3-215ENST00000572750 ZNF223Q9UK11 482 aaPredicted RBP14.74□□□□□ -0.05
CHD3-215ENST00000572750 DLGAP4Q9Y2H0 992 aa14.74□□□□□ -0.05
CHD3-215ENST00000572750 ATP6AP2A0A1C7CYW4 349 aa14.73□□□□□ -0.05
CHD3-215ENST00000572750 HMGB1P1B2RPK0 211 aaPredicted RBP14.73□□□□□ -0.05
CHD3-215ENST00000572750 HRKO00198 91 aa14.73□□□□□ -0.05
CHD3-215ENST00000572750 DPM1O60762 260 aa14.73□□□□□ -0.05
CHD3-215ENST00000572750 ATP6AP2O75787 350 aa14.73□□□□□ -0.05
CHD3-215ENST00000572750 DDAH2O95865 285 aa14.73□□□□□ -0.05
CHD3-215ENST00000572750 COX7A2P14406 83 aa14.73□□□□□ -0.05
CHD3-215ENST00000572750 TNNI3P19429 210 aa14.73□□□□□ -0.05
CHD3-215ENST00000572750 PIK3R1P27986 724 aa14.73□□□□□ -0.05
CHD3-215ENST00000572750 PTGER1P34995 402 aa14.73□□□□□ -0.05
CHD3-215ENST00000572750 ST13P50502 369 aaKnown RBP14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms