RNA–Protein interactions for RNA: ENST00000571688.5

LITAF-209, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,632 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-209ENST00000571688 LRRC32Q14392 662 aa16■□□□□ 0.15
LITAF-209ENST00000571688 GPR176Q14439 515 aa16■□□□□ 0.15
LITAF-209ENST00000571688 SEC23BQ15437 767 aa16■□□□□ 0.15
LITAF-209ENST00000571688 ZNF630Q2M218 657 aaPredicted RBP16■□□□□ 0.15
LITAF-209ENST00000571688 KLHL12Q53G59 568 aa16■□□□□ 0.15
LITAF-209ENST00000571688 PLA1AQ53H76 456 aa16■□□□□ 0.15
LITAF-209ENST00000571688 C3orf38Q5JPI3 329 aa16■□□□□ 0.15
LITAF-209ENST00000571688 LIPJQ5W064 366 aa16■□□□□ 0.15
LITAF-209ENST00000571688 TYW3Q6IPR3 259 aaKnown RBP16■□□□□ 0.15
LITAF-209ENST00000571688 BMP8AQ7Z5Y6 402 aa16■□□□□ 0.15
LITAF-209ENST00000571688 ADGRG3Q86Y34 549 aa16■□□□□ 0.15
LITAF-209ENST00000571688 MYO19Q96H55 970 aa16■□□□□ 0.15
LITAF-209ENST00000571688 PRR14Q9BWN1 585 aa16■□□□□ 0.15
LITAF-209ENST00000571688 ZFYVE1Q9HBF4 777 aa16■□□□□ 0.15
LITAF-209ENST00000571688 CUEDC1Q9NWM3 386 aaPredicted RBP16■□□□□ 0.15
LITAF-209ENST00000571688 KLHL42Q9P2K6 505 aa16■□□□□ 0.15
LITAF-209ENST00000571688 UTRNP46939 3433 aa16■□□□□ 0.15
LITAF-209ENST00000571688 H3BN98 237 aa16■□□□□ 0.15
LITAF-209ENST00000571688 PSIP1O75475 530 aaKnown RBP16■□□□□ 0.15
LITAF-209ENST00000571688 ALDH1A1P00352 501 aa16■□□□□ 0.15
LITAF-209ENST00000571688 C8GP07360 202 aa16■□□□□ 0.15
LITAF-209ENST00000571688 HOXD4P09016 255 aaPredicted RBP16■□□□□ 0.15
LITAF-209ENST00000571688 HIST1H2AGP0C0S8 130 aaPredicted RBP16■□□□□ 0.15
LITAF-209ENST00000571688 RRASP10301 218 aa16■□□□□ 0.15
LITAF-209ENST00000571688 HIST1H2ADP20671 130 aa16■□□□□ 0.15
LITAF-209ENST00000571688 CCR7P32248 378 aa16■□□□□ 0.15
LITAF-209ENST00000571688 DDX39BQ13838 428 aaKnown RBP16■□□□□ 0.15
LITAF-209ENST00000571688 EXOSC2Q13868 293 aaKnown RBP16■□□□□ 0.15
LITAF-209ENST00000571688 CHRNA6Q15825 494 aa16■□□□□ 0.15
LITAF-209ENST00000571688 PRAMEF19Q5SWL8 479 aa16■□□□□ 0.15
LITAF-209ENST00000571688 OR2G6Q5TZ20 316 aa16■□□□□ 0.15
LITAF-209ENST00000571688 MFSD14CQ5VZR4 134 aa16■□□□□ 0.15
LITAF-209ENST00000571688 NXPE1Q8N323 547 aa16■□□□□ 0.15
LITAF-209ENST00000571688 OXR1Q8N573 874 aa16■□□□□ 0.15
LITAF-209ENST00000571688 FAM26EQ8N5C1 309 aa16■□□□□ 0.15
LITAF-209ENST00000571688 ZNF655Q8N720 491 aaPredicted RBP16■□□□□ 0.15
LITAF-209ENST00000571688 DNAJC5GQ8N7S2 189 aa16■□□□□ 0.15
LITAF-209ENST00000571688 GTF3C2Q8WUA4 911 aaPredicted RBP16■□□□□ 0.15
LITAF-209ENST00000571688 HIST1H2AHQ96KK5 128 aa16■□□□□ 0.15
LITAF-209ENST00000571688 HIST1H2AJQ99878 128 aa16■□□□□ 0.15
LITAF-209ENST00000571688 H2AFJQ9BTM1 129 aa16■□□□□ 0.15
LITAF-209ENST00000571688 ZSCAN32Q9NX65 697 aa16■□□□□ 0.15
LITAF-209ENST00000571688 RAB23Q9ULC3 237 aa16■□□□□ 0.15
LITAF-209ENST00000571688 EXO1Q9UQ84 846 aaKnown RBP16■□□□□ 0.15
LITAF-209ENST00000571688 GLYATL1P3A0A0U1RQE8 302 aa15.99■□□□□ 0.15
LITAF-209ENST00000571688 ZNF623O75123 536 aa15.99■□□□□ 0.15
LITAF-209ENST00000571688 SOD1P00441 154 aa15.99■□□□□ 0.15
LITAF-209ENST00000571688 ARAFP10398 606 aa15.99■□□□□ 0.15
LITAF-209ENST00000571688 ATP12AP54707 1039 aa15.99■□□□□ 0.15
LITAF-209ENST00000571688 GAS1P54826 345 aa15.99■□□□□ 0.15
LITAF-209ENST00000571688 CTBP2P56545 445 aa15.99■□□□□ 0.15
LITAF-209ENST00000571688 IRF8Q02556 426 aa15.99■□□□□ 0.15
LITAF-209ENST00000571688 DSG2Q14126 1118 aa15.99■□□□□ 0.15
LITAF-209ENST00000571688 PUM1Q14671 1186 aaKnown RBP eCLIP15.99■□□□□ 0.15
LITAF-209ENST00000571688 GPR162Q16538 588 aa15.99■□□□□ 0.15
LITAF-209ENST00000571688 DTX3Q8N9I9 347 aa15.99■□□□□ 0.15
LITAF-209ENST00000571688 APOBEC4Q8WW27 367 aaKnown RBP15.99■□□□□ 0.15
LITAF-209ENST00000571688 UFD1Q92890 307 aa15.99■□□□□ 0.15
LITAF-209ENST00000571688 PMEPA1Q969W9 287 aa15.99■□□□□ 0.15
LITAF-209ENST00000571688 SCMH1Q96GD3 660 aa15.99■□□□□ 0.15
LITAF-209ENST00000571688 PKP4Q99569 1192 aa15.99■□□□□ 0.15
LITAF-209ENST00000571688 BHLHE41Q9C0J9 482 aaPredicted RBP15.99■□□□□ 0.15
LITAF-209ENST00000571688 GHITMQ9H3K2 345 aa15.99■□□□□ 0.15
LITAF-209ENST00000571688 RC3H2Q9HBD1 1191 aaKnown RBP15.99■□□□□ 0.15
LITAF-209ENST00000571688 ACSL6Q9UKU0 697 aa15.99■□□□□ 0.15
LITAF-209ENST00000571688 TMEM129A0AVI4 362 aa15.99■□□□□ 0.15
LITAF-209ENST00000571688 PRKYO43930 277 aa15.99■□□□□ 0.15
LITAF-209ENST00000571688 UGDHO60701 494 aa15.99■□□□□ 0.15
LITAF-209ENST00000571688 MTRF1O75570 445 aaKnown RBP15.99■□□□□ 0.15
LITAF-209ENST00000571688 ETHE1O95571 254 aa15.99■□□□□ 0.15
LITAF-209ENST00000571688 IFNA7P01567 189 aa15.99■□□□□ 0.15
LITAF-209ENST00000571688 NR2F6P10588 404 aa15.99■□□□□ 0.15
LITAF-209ENST00000571688 STOMP27105 288 aa15.99■□□□□ 0.15
LITAF-209ENST00000571688 SGSHP51688 502 aa15.99■□□□□ 0.15
LITAF-209ENST00000571688 PFN3P60673 137 aa15.99■□□□□ 0.15
LITAF-209ENST00000571688 ADAM15Q13444 863 aa15.99■□□□□ 0.15
LITAF-209ENST00000571688 MRPL58Q14197 206 aaKnown RBP15.99■□□□□ 0.15
LITAF-209ENST00000571688 GRB14Q14449 540 aa15.99■□□□□ 0.15
LITAF-209ENST00000571688 SLC25A30Q5SVS4 291 aa15.99■□□□□ 0.15
LITAF-209ENST00000571688 BCL2L15Q5TBC7 163 aa15.99■□□□□ 0.15
LITAF-209ENST00000571688 C16orf62Q7Z3J2 963 aa15.99■□□□□ 0.15
LITAF-209ENST00000571688 OR4K1Q8NGD4 311 aa15.99■□□□□ 0.15
LITAF-209ENST00000571688 NPLOC4Q8TAT6 608 aa15.99■□□□□ 0.15
LITAF-209ENST00000571688 ASB11Q8WXH4 323 aa15.99■□□□□ 0.15
LITAF-209ENST00000571688 PPA2Q9H2U2 334 aa15.99■□□□□ 0.15
LITAF-209ENST00000571688 TNFRSF10DQ9UBN6 386 aa15.99■□□□□ 0.15
LITAF-209ENST00000571688 HELZP42694 1942 aaKnown RBP15.99■□□□□ 0.15
LITAF-209ENST00000571688 TRDV1A0A1B0GX56 115 aa15.98■□□□□ 0.15
LITAF-209ENST00000571688 OAZ2O95190 189 aa15.98■□□□□ 0.15
LITAF-209ENST00000571688 CTSHP09668 335 aa15.98■□□□□ 0.15
LITAF-209ENST00000571688 ANXA3P12429 323 aa15.98■□□□□ 0.15
LITAF-209ENST00000571688 ICAM2P13598 275 aa15.98■□□□□ 0.15
LITAF-209ENST00000571688 ELAVL4P26378 380 aaKnown RBP15.98■□□□□ 0.15
LITAF-209ENST00000571688 GPR33Q49SQ1 333 aa15.98■□□□□ 0.15
LITAF-209ENST00000571688 SYT14P1Q58G82 188 aa15.98■□□□□ 0.15
LITAF-209ENST00000571688 ARMC12Q5T9G4 340 aa15.98■□□□□ 0.15
LITAF-209ENST00000571688 GPR142Q7Z601 462 aa15.98■□□□□ 0.15
LITAF-209ENST00000571688 CELF5Q8N6W0 485 aaKnown RBP15.98■□□□□ 0.15
LITAF-209ENST00000571688 C19orf43Q9BQ61 176 aa15.98■□□□□ 0.15
LITAF-209ENST00000571688 DPCDQ9BVM2 203 aaPredicted RBP15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms