RNA–Protein interactions for RNA: ENST00000569916.1

CNOT1-220, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-220ENST00000569916 ARHGAP10A1A4S6 786 aa12.1□□□□□ -0.47
CNOT1-220ENST00000569916 HRKO00198 91 aa12.1□□□□□ -0.47
CNOT1-220ENST00000569916 UBFD1O14562 309 aaKnown RBP12.1□□□□□ -0.47
CNOT1-220ENST00000569916 PGRMC2O15173 223 aa12.1□□□□□ -0.47
CNOT1-220ENST00000569916 OR2J2O76002 312 aa12.1□□□□□ -0.47
CNOT1-220ENST00000569916 ESRRBO95718 433 aa12.1□□□□□ -0.47
CNOT1-220ENST00000569916 ENO1P06733 434 aaKnown RBP12.1□□□□□ -0.47
CNOT1-220ENST00000569916 HSD3B1P14060 373 aa12.1□□□□□ -0.47
CNOT1-220ENST00000569916 CHN1P15882 459 aa12.1□□□□□ -0.47
CNOT1-220ENST00000569916 HSD3B2P26439 372 aa12.1□□□□□ -0.47
CNOT1-220ENST00000569916 HMOX2P30519 316 aa12.1□□□□□ -0.47
CNOT1-220ENST00000569916 SSR4P51571 173 aa12.1□□□□□ -0.47
CNOT1-220ENST00000569916 HK2P52789 917 aa12.1□□□□□ -0.47
CNOT1-220ENST00000569916 RNF4P78317 190 aa12.1□□□□□ -0.47
CNOT1-220ENST00000569916 MAPKAPK3Q16644 382 aa12.1□□□□□ -0.47
CNOT1-220ENST00000569916 SPRED3Q2MJR0 410 aa12.1□□□□□ -0.47
CNOT1-220ENST00000569916 CCNYL2Q5T2Q4 361 aa12.1□□□□□ -0.47
CNOT1-220ENST00000569916 NDUFAF5Q5TEU4 345 aa12.1□□□□□ -0.47
CNOT1-220ENST00000569916 FRMD7Q6ZUT3 714 aa12.1□□□□□ -0.47
CNOT1-220ENST00000569916 CYP4Z2PQ8N1L4 340 aa12.1□□□□□ -0.47
CNOT1-220ENST00000569916 TMEM156Q8N614 296 aa12.1□□□□□ -0.47
CNOT1-220ENST00000569916 CCNYL1Q8N7R7 359 aa12.1□□□□□ -0.47
CNOT1-220ENST00000569916 METTL6Q8TCB7 284 aa12.1□□□□□ -0.47
CNOT1-220ENST00000569916 SSC4DQ8WTU2 575 aa12.1□□□□□ -0.47
CNOT1-220ENST00000569916 SREK1Q8WXA9 508 aaKnown RBP12.1□□□□□ -0.47
CNOT1-220ENST00000569916 RBM18Q96H35 190 aaKnown RBP12.1□□□□□ -0.47
CNOT1-220ENST00000569916 SENP5Q96HI0 755 aaPredicted RBP12.1□□□□□ -0.47
CNOT1-220ENST00000569916 FBXL20Q96IG2 436 aa12.1□□□□□ -0.47
CNOT1-220ENST00000569916 RASL10BQ96S79 203 aa12.1□□□□□ -0.47
CNOT1-220ENST00000569916 PELOQ9BRX2 385 aaKnown RBP12.1□□□□□ -0.47
CNOT1-220ENST00000569916 ACPTQ9BZG2 426 aa12.1□□□□□ -0.47
CNOT1-220ENST00000569916 MKS1Q9NXB0 559 aa12.1□□□□□ -0.47
CNOT1-220ENST00000569916 COPS7AQ9UBW8 275 aa12.1□□□□□ -0.47
CNOT1-220ENST00000569916 LGALS13Q9UHV8 139 aa12.1□□□□□ -0.47
CNOT1-220ENST00000569916 ERRFI1Q9UJM3 462 aaPredicted RBP12.1□□□□□ -0.47
CNOT1-220ENST00000569916 YARS2Q9Y2Z4 477 aaKnown RBP12.1□□□□□ -0.47
CNOT1-220ENST00000569916 EML6Q6ZMW3 1958 aa12.1□□□□□ -0.47
CNOT1-220ENST00000569916 SVILO95425 2214 aa12.1□□□□□ -0.47
CNOT1-220ENST00000569916 COL12A1Q99715 3063 aa12.09□□□□□ -0.47
CNOT1-220ENST00000569916 WWP2O00308 870 aa12.09□□□□□ -0.47
CNOT1-220ENST00000569916 ULK1O75385 1050 aa12.09□□□□□ -0.47
CNOT1-220ENST00000569916 WISP2O76076 250 aa12.09□□□□□ -0.47
CNOT1-220ENST00000569916 OR6B1O95007 311 aa12.09□□□□□ -0.47
CNOT1-220ENST00000569916 SLC35E2P0CK97 266 aa12.09□□□□□ -0.47
CNOT1-220ENST00000569916 CPA3P15088 417 aa12.09□□□□□ -0.47
CNOT1-220ENST00000569916 SOX3P41225 446 aa12.09□□□□□ -0.47
CNOT1-220ENST00000569916 MAPK12P53778 367 aa12.09□□□□□ -0.47
CNOT1-220ENST00000569916 NAGLUP54802 743 aa12.09□□□□□ -0.47
CNOT1-220ENST00000569916 FOXA1P55317 472 aa12.09□□□□□ -0.47
CNOT1-220ENST00000569916 KCNK10P57789 538 aa12.09□□□□□ -0.47
CNOT1-220ENST00000569916 DNAJB13P59910 316 aa12.09□□□□□ -0.47
CNOT1-220ENST00000569916 PCLAFQ15004 111 aa12.09□□□□□ -0.47
CNOT1-220ENST00000569916 ERCC6LQ2NKX8 1250 aa12.09□□□□□ -0.47
CNOT1-220ENST00000569916 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.09□□□□□ -0.47
CNOT1-220ENST00000569916 TRABD2AQ86V40 505 aa12.09□□□□□ -0.47
CNOT1-220ENST00000569916 C9orf40Q8IXQ3 194 aa12.09□□□□□ -0.47
CNOT1-220ENST00000569916 C1orf52Q8N6N3 182 aaKnown RBP12.09□□□□□ -0.47
CNOT1-220ENST00000569916 CCDC63Q8NA47 563 aa12.09□□□□□ -0.47
CNOT1-220ENST00000569916 FAM98AQ8NCA5 519 aaKnown RBP12.09□□□□□ -0.47
CNOT1-220ENST00000569916 DOK4Q8TEW6 326 aa12.09□□□□□ -0.47
CNOT1-220ENST00000569916 TMEM125Q96AQ2 219 aa12.09□□□□□ -0.47
CNOT1-220ENST00000569916 APOPT1Q96IL0 206 aa12.09□□□□□ -0.47
CNOT1-220ENST00000569916 ART5Q96L15 291 aa12.09□□□□□ -0.47
CNOT1-220ENST00000569916 PSMG3-AS1Q96PY0 264 aa12.09□□□□□ -0.47
CNOT1-220ENST00000569916 MID1IP1Q9NPA3 183 aa12.09□□□□□ -0.47
CNOT1-220ENST00000569916 OXSMQ9NWU1 459 aa12.09□□□□□ -0.47
CNOT1-220ENST00000569916 NMRK1Q9NWW6 199 aa12.09□□□□□ -0.47
CNOT1-220ENST00000569916 VPS29Q9UBQ0 182 aa12.09□□□□□ -0.47
CNOT1-220ENST00000569916 OSGIN2Q9Y236 505 aa12.09□□□□□ -0.47
CNOT1-220ENST00000569916 TIMM22Q9Y584 194 aa12.09□□□□□ -0.47
CNOT1-220ENST00000569916 PCDHA9Q9Y5H5 950 aa12.09□□□□□ -0.47
CNOT1-220ENST00000569916 HECTD1Q9ULT8 2610 aa12.09□□□□□ -0.47
CNOT1-220ENST00000569916 EXPH5Q8NEV8 1989 aa12.09□□□□□ -0.47
CNOT1-220ENST00000569916 DYRK3O43781 588 aa12.08□□□□□ -0.48
CNOT1-220ENST00000569916 OR10H2O60403 315 aa12.08□□□□□ -0.48
CNOT1-220ENST00000569916 ZNF354AO60765 605 aaPredicted RBP12.08□□□□□ -0.48
CNOT1-220ENST00000569916 UNC5CO95185 931 aa12.08□□□□□ -0.48
CNOT1-220ENST00000569916 LDLRP01130 860 aa12.08□□□□□ -0.48
CNOT1-220ENST00000569916 CLPSP04118 112 aa12.08□□□□□ -0.48
CNOT1-220ENST00000569916 PIK3R1P27986 724 aa12.08□□□□□ -0.48
CNOT1-220ENST00000569916 GALNSP34059 522 aa12.08□□□□□ -0.48
CNOT1-220ENST00000569916 NAA20P61599 178 aa12.08□□□□□ -0.48
CNOT1-220ENST00000569916 ERVK-8P63133 956 aa12.08□□□□□ -0.48
CNOT1-220ENST00000569916 IFFO1Q0D2I5 559 aa12.08□□□□□ -0.48
CNOT1-220ENST00000569916 LIPMQ5VYY2 423 aa12.08□□□□□ -0.48
CNOT1-220ENST00000569916 SLC48A1Q6P1K1 146 aa12.08□□□□□ -0.48
CNOT1-220ENST00000569916 GFRALQ6UXV0 394 aa12.08□□□□□ -0.48
CNOT1-220ENST00000569916 MDGA2Q7Z553 956 aa12.08□□□□□ -0.48
CNOT1-220ENST00000569916 SIAH3Q8IW03 269 aa12.08□□□□□ -0.48
CNOT1-220ENST00000569916 GPALPP1Q8IXQ4 340 aa12.08□□□□□ -0.48
CNOT1-220ENST00000569916 MMP21Q8N119 569 aa12.08□□□□□ -0.48
CNOT1-220ENST00000569916 MREGQ8N565 214 aa12.08□□□□□ -0.48
CNOT1-220ENST00000569916 CPSF7Q8N684 471 aaKnown RBP12.08□□□□□ -0.48
CNOT1-220ENST00000569916 GBP7Q8N8V2 638 aaPredicted RBP12.08□□□□□ -0.48
CNOT1-220ENST00000569916 BANPQ8N9N5 519 aa12.08□□□□□ -0.48
CNOT1-220ENST00000569916 OR4K14Q8NGD5 310 aa12.08□□□□□ -0.48
CNOT1-220ENST00000569916 OR5L2Q8NGL0 311 aa12.08□□□□□ -0.48
CNOT1-220ENST00000569916 NUBPLQ8TB37 319 aa12.08□□□□□ -0.48
CNOT1-220ENST00000569916 CHTF18Q8WVB6 975 aa12.08□□□□□ -0.48
CNOT1-220ENST00000569916 ASB15Q8WXK1 588 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms