RNA–Protein interactions for RNA: ENST00000569575.5

RAB40C-212, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 692 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-212ENST00000569575 CCNL2Q96S94 520 aaPredicted RBP22■■□□□ 1.11
RAB40C-212ENST00000569575 ADAP2Q9NPF8 381 aa22■■□□□ 1.11
RAB40C-212ENST00000569575 SAR1AQ9NR31 198 aa22■■□□□ 1.11
RAB40C-212ENST00000569575 FAM120CQ9NX05 1096 aaKnown RBP22■■□□□ 1.11
RAB40C-212ENST00000569575 CLDN16Q9Y5I7 305 aa22■■□□□ 1.11
RAB40C-212ENST00000569575 GLOD5A6NK44 160 aa21.99■■□□□ 1.11
RAB40C-212ENST00000569575 TLX3O43711 291 aaPredicted RBP21.99■■□□□ 1.11
RAB40C-212ENST00000569575 LDB3O75112 727 aa21.99■■□□□ 1.11
RAB40C-212ENST00000569575 ERAL1O75616 437 aaKnown RBP21.99■■□□□ 1.11
RAB40C-212ENST00000569575 LRATO95237 230 aa21.99■■□□□ 1.11
RAB40C-212ENST00000569575 LIFP15018 202 aa21.99■■□□□ 1.11
RAB40C-212ENST00000569575 S100A3P33764 101 aa21.99■■□□□ 1.11
RAB40C-212ENST00000569575 UCNP55089 124 aa21.99■■□□□ 1.11
RAB40C-212ENST00000569575 AP2B1P63010 937 aa21.99■■□□□ 1.11
RAB40C-212ENST00000569575 TGIF1Q15583 401 aa21.99■■□□□ 1.11
RAB40C-212ENST00000569575 UNQ6494/PRO21346Q6UXR6 183 aa21.99■■□□□ 1.11
RAB40C-212ENST00000569575 KRTCAP2Q8N6L1 136 aa21.99■■□□□ 1.11
RAB40C-212ENST00000569575 THAP4Q8WY91 577 aa21.99■■□□□ 1.11
RAB40C-212ENST00000569575 DAZLQ92904 295 aaKnown RBP21.99■■□□□ 1.11
RAB40C-212ENST00000569575 GFM2Q969S9 779 aaKnown RBP21.99■■□□□ 1.11
RAB40C-212ENST00000569575 RNF31Q96EP0 1072 aa21.99■■□□□ 1.11
RAB40C-212ENST00000569575 ART5Q96L15 291 aa21.99■■□□□ 1.11
RAB40C-212ENST00000569575 DGAT2Q96PD7 388 aa21.99■■□□□ 1.11
RAB40C-212ENST00000569575 BBS4Q96RK4 519 aa21.99■■□□□ 1.11
RAB40C-212ENST00000569575 DUSP26Q9BV47 211 aa21.99■■□□□ 1.11
RAB40C-212ENST00000569575 RBCK1Q9BYM8 510 aa21.99■■□□□ 1.11
RAB40C-212ENST00000569575 CCDC88CQ9P219 2028 aa21.99■■□□□ 1.11
RAB40C-212ENST00000569575 ZNF891A8MT65 544 aaPredicted RBP21.98■■□□□ 1.11
RAB40C-212ENST00000569575 RNASET2O00584 256 aaKnown RBP21.98■■□□□ 1.11
RAB40C-212ENST00000569575 PDPK1O15530 556 aa21.98■■□□□ 1.11
RAB40C-212ENST00000569575 ICAM2P13598 275 aa21.98■■□□□ 1.11
RAB40C-212ENST00000569575 MAOAP21397 527 aa21.98■■□□□ 1.11
RAB40C-212ENST00000569575 F8A1P23610 371 aa21.98■■□□□ 1.11
RAB40C-212ENST00000569575 POLR2JP52435 117 aaKnown RBP21.98■■□□□ 1.11
RAB40C-212ENST00000569575 KCNK10P57789 538 aa21.98■■□□□ 1.11
RAB40C-212ENST00000569575 RCAN2Q14206 197 aa21.98■■□□□ 1.11
RAB40C-212ENST00000569575 BROXQ5VW32 411 aa21.98■■□□□ 1.11
RAB40C-212ENST00000569575 BLOC1S3Q6QNY0 202 aa21.98■■□□□ 1.11
RAB40C-212ENST00000569575 LRRC69Q6ZNQ3 347 aa21.98■■□□□ 1.11
RAB40C-212ENST00000569575 CPEB2Q7Z5Q1 589 aaKnown RBP21.98■■□□□ 1.11
RAB40C-212ENST00000569575 PRSS58Q8IYP2 241 aa21.98■■□□□ 1.11
RAB40C-212ENST00000569575 EXOSC8Q96B26 276 aaKnown RBP21.98■■□□□ 1.11
RAB40C-212ENST00000569575 CNRIP1Q96F85 164 aaPredicted RBP21.98■■□□□ 1.11
RAB40C-212ENST00000569575 LRRC37BQ96QE4 947 aa21.98■■□□□ 1.11
RAB40C-212ENST00000569575 NECTIN3Q9NQS3 549 aa21.98■■□□□ 1.11
RAB40C-212ENST00000569575 RYDENQ9NUL5 291 aaKnown RBP21.98■■□□□ 1.11
RAB40C-212ENST00000569575 PRSS51A0A1B0GVH4 220 aa21.97■■□□□ 1.11
RAB40C-212ENST00000569575 PEX12O00623 359 aa21.97■■□□□ 1.11
RAB40C-212ENST00000569575 CFLARO15519 480 aa21.97■■□□□ 1.11
RAB40C-212ENST00000569575 KLK10O43240 276 aa21.97■■□□□ 1.11
RAB40C-212ENST00000569575 OR10H2O60403 315 aa21.97■■□□□ 1.11
RAB40C-212ENST00000569575 PGRP06401 933 aa21.97■■□□□ 1.11
RAB40C-212ENST00000569575 OR4D2P58180 307 aa21.97■■□□□ 1.11
RAB40C-212ENST00000569575 SPRED3Q2MJR0 410 aa21.97■■□□□ 1.11
RAB40C-212ENST00000569575 C6orf163Q5TEZ5 329 aa21.97■■□□□ 1.11
RAB40C-212ENST00000569575 ANKRD37Q7Z713 158 aa21.97■■□□□ 1.11
RAB40C-212ENST00000569575 OR14A16Q8NHC5 309 aa21.97■■□□□ 1.11
RAB40C-212ENST00000569575 DNAJB8Q8NHS0 232 aa21.97■■□□□ 1.11
RAB40C-212ENST00000569575 ZNF675Q8TD23 568 aa21.97■■□□□ 1.11
RAB40C-212ENST00000569575 LPAR4Q99677 370 aa21.97■■□□□ 1.11
RAB40C-212ENST00000569575 RMND5AQ9H871 391 aa21.97■■□□□ 1.11
RAB40C-212ENST00000569575 NEUROD4Q9HD90 331 aa21.97■■□□□ 1.11
RAB40C-212ENST00000569575 PCDHGB4Q9UN71 923 aa21.97■■□□□ 1.11
RAB40C-212ENST00000569575 G3BP2Q9UN86 482 aaKnown RBP21.97■■□□□ 1.11
RAB40C-212ENST00000569575 SCN2AQ99250 2005 aa21.97■■□□□ 1.11
RAB40C-212ENST00000569575 PRKRAO75569 313 aaKnown RBP21.96■■□□□ 1.11
RAB40C-212ENST00000569575 BCAS2O75934 225 aaPredicted RBP21.96■■□□□ 1.11
RAB40C-212ENST00000569575 MAP4K2Q12851 820 aa21.96■■□□□ 1.11
RAB40C-212ENST00000569575 FAM174BQ3ZCQ3 159 aa21.96■■□□□ 1.11
RAB40C-212ENST00000569575 PAOXQ6QHF9 649 aa21.96■■□□□ 1.11
RAB40C-212ENST00000569575 SHISA6Q6ZSJ9 500 aa21.96■■□□□ 1.11
RAB40C-212ENST00000569575 MORN4Q8NDC4 146 aa21.96■■□□□ 1.11
RAB40C-212ENST00000569575 OR7A2PQ8NGA2 310 aa21.96■■□□□ 1.11
RAB40C-212ENST00000569575 ADAMTS17Q8TE56 1095 aa21.96■■□□□ 1.11
RAB40C-212ENST00000569575 OR5P2Q8WZ92 322 aa21.96■■□□□ 1.11
RAB40C-212ENST00000569575 MARK4Q96L34 752 aa21.96■■□□□ 1.11
RAB40C-212ENST00000569575 TUBB6Q9BUF5 446 aa21.96■■□□□ 1.11
RAB40C-212ENST00000569575 ZNF700Q9H0M5 742 aa21.96■■□□□ 1.11
RAB40C-212ENST00000569575 MYLK2Q9H1R3 596 aa21.96■■□□□ 1.11
RAB40C-212ENST00000569575 IL17BQ9UHF5 180 aa21.96■■□□□ 1.11
RAB40C-212ENST00000569575 BTNL2Q9UIR0 455 aa21.96■■□□□ 1.11
RAB40C-212ENST00000569575 PPIEQ9UNP9 301 aaKnown RBP21.96■■□□□ 1.11
RAB40C-212ENST00000569575 HS3ST3B1Q9Y662 390 aa21.96■■□□□ 1.11
RAB40C-212ENST00000569575 CLCA3PQ9Y6N3 262 aa21.96■■□□□ 1.11
RAB40C-212ENST00000569575 CAPN7Q9Y6W3 813 aa21.96■■□□□ 1.11
RAB40C-212ENST00000569575 ACACAQ13085 2346 aa21.95■■□□□ 1.1
RAB40C-212ENST00000569575 FCHO1O14526 889 aa21.95■■□□□ 1.1
RAB40C-212ENST00000569575 IFNA16P05015 189 aa21.95■■□□□ 1.1
RAB40C-212ENST00000569575 LAMP1P11279 417 aa21.95■■□□□ 1.1
RAB40C-212ENST00000569575 MANFP55145 182 aaKnown RBP21.95■■□□□ 1.1
RAB40C-212ENST00000569575 COL9A2Q14055 689 aaPredicted RBP21.95■■□□□ 1.1
RAB40C-212ENST00000569575 EXT1Q16394 746 aa21.95■■□□□ 1.1
RAB40C-212ENST00000569575 PGS1Q32NB8 556 aa21.95■■□□□ 1.1
RAB40C-212ENST00000569575 AGKQ53H12 422 aa21.95■■□□□ 1.1
RAB40C-212ENST00000569575 FAM91A1Q658Y4 838 aa21.95■■□□□ 1.1
RAB40C-212ENST00000569575 NDUFAF7Q7L592 441 aa21.95■■□□□ 1.1
RAB40C-212ENST00000569575 MTDHQ86UE4 582 aaKnown RBP21.95■■□□□ 1.1
RAB40C-212ENST00000569575 TMEM151BQ8IW70 566 aa21.95■■□□□ 1.1
RAB40C-212ENST00000569575 MMP21Q8N119 569 aa21.95■■□□□ 1.1
RAB40C-212ENST00000569575 PSMA8Q8TAA3 256 aa21.95■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms