RNA–Protein interactions for RNA: ENST00000569140.1

CDT1-203, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

TSL 3

Gene CDT1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-203ENST00000569140 ZDHHC2Q9UIJ5 367 aa11.96□□□□□ -0.49
CDT1-203ENST00000569140 DLGAP4Q9Y2H0 992 aa11.96□□□□□ -0.49
CDT1-203ENST00000569140 PCDHA9Q9Y5H5 950 aa11.96□□□□□ -0.49
CDT1-203ENST00000569140 CLDN16Q9Y5I7 305 aa11.96□□□□□ -0.49
CDT1-203ENST00000569140 CSAG2Q9Y5P2 127 aa11.96□□□□□ -0.49
CDT1-203ENST00000569140 DNAJC15Q9Y5T4 150 aa11.96□□□□□ -0.49
CDT1-203ENST00000569140 UQCRHLA0A096LP55 91 aa11.95□□□□□ -0.5
CDT1-203ENST00000569140 A0A1W2PS29 197 aa11.95□□□□□ -0.5
CDT1-203ENST00000569140 SERTM1A2A2V5 107 aa11.95□□□□□ -0.5
CDT1-203ENST00000569140 TTLL8A6PVC2 850 aa11.95□□□□□ -0.5
CDT1-203ENST00000569140 FCHO1O14526 889 aa11.95□□□□□ -0.5
CDT1-203ENST00000569140 GRK2P25098 689 aa11.95□□□□□ -0.5
CDT1-203ENST00000569140 ARRB2P32121 409 aa11.95□□□□□ -0.5
CDT1-203ENST00000569140 SOX11P35716 441 aa11.95□□□□□ -0.5
CDT1-203ENST00000569140 FEN1P39748 380 aaKnown RBP11.95□□□□□ -0.5
CDT1-203ENST00000569140 CASRP41180 1078 aa11.95□□□□□ -0.5
CDT1-203ENST00000569140 TRA2BP62995 288 aaKnown RBP11.95□□□□□ -0.5
CDT1-203ENST00000569140 OC90Q02509 493 aaPredicted RBP11.95□□□□□ -0.5
CDT1-203ENST00000569140 ZNF267Q14586 743 aaPredicted RBP11.95□□□□□ -0.5
CDT1-203ENST00000569140 TERF2Q15554 542 aa11.95□□□□□ -0.5
CDT1-203ENST00000569140 ZNF750Q32MQ0 723 aa11.95□□□□□ -0.5
CDT1-203ENST00000569140 TTMPQ5BVD1 217 aa11.95□□□□□ -0.5
CDT1-203ENST00000569140 ACER2Q5QJU3 275 aa11.95□□□□□ -0.5
CDT1-203ENST00000569140 CES4AQ5XG92 561 aa11.95□□□□□ -0.5
CDT1-203ENST00000569140 FAM180BQ6P0A1 224 aa11.95□□□□□ -0.5
CDT1-203ENST00000569140 SLC48A1Q6P1K1 146 aa11.95□□□□□ -0.5
CDT1-203ENST00000569140 ATG14Q6ZNE5 492 aa11.95□□□□□ -0.5
CDT1-203ENST00000569140 HOMEZQ8IX15 550 aa11.95□□□□□ -0.5
CDT1-203ENST00000569140 ST13P4Q8IZP2 240 aaPredicted RBP11.95□□□□□ -0.5
CDT1-203ENST00000569140 MORN4Q8NDC4 146 aa11.95□□□□□ -0.5
CDT1-203ENST00000569140 NFAM1Q8NET5 270 aaPredicted RBP11.95□□□□□ -0.5
CDT1-203ENST00000569140 OR2T11Q8NH01 316 aa11.95□□□□□ -0.5
CDT1-203ENST00000569140 SUN3Q8TAQ9 357 aa11.95□□□□□ -0.5
CDT1-203ENST00000569140 SLC2A12Q8TD20 617 aa11.95□□□□□ -0.5
CDT1-203ENST00000569140 ELP5Q8TE02 316 aa11.95□□□□□ -0.5
CDT1-203ENST00000569140 PTPMT1Q8WUK0 201 aaPredicted RBP11.95□□□□□ -0.5
CDT1-203ENST00000569140 PSMF1Q92530 271 aa11.95□□□□□ -0.5
CDT1-203ENST00000569140 RIT1Q92963 219 aa11.95□□□□□ -0.5
CDT1-203ENST00000569140 EXOSC8Q96B26 276 aaKnown RBP11.95□□□□□ -0.5
CDT1-203ENST00000569140 ART5Q96L15 291 aa11.95□□□□□ -0.5
CDT1-203ENST00000569140 LMF1Q96S06 567 aa11.95□□□□□ -0.5
CDT1-203ENST00000569140 TUBB1Q9H4B7 451 aa11.95□□□□□ -0.5
CDT1-203ENST00000569140 VIPAS39Q9H9C1 493 aa11.95□□□□□ -0.5
CDT1-203ENST00000569140 LIN28AQ9H9Z2 209 aaKnown RBP11.95□□□□□ -0.5
CDT1-203ENST00000569140 MIEF1Q9NQG6 463 aa11.95□□□□□ -0.5
CDT1-203ENST00000569140 GIMAP4Q9NUV9 329 aa11.95□□□□□ -0.5
CDT1-203ENST00000569140 UTS2RQ9UKP6 389 aa11.95□□□□□ -0.5
CDT1-203ENST00000569140 PSME2Q9UL46 239 aa11.95□□□□□ -0.5
CDT1-203ENST00000569140 B3GNT3Q9Y2A9 372 aa11.95□□□□□ -0.5
CDT1-203ENST00000569140 ZNF780BQ9Y6R6 833 aa11.95□□□□□ -0.5
CDT1-203ENST00000569140 ATP6AP2A0A1C7CYW4 349 aa11.94□□□□□ -0.5
CDT1-203ENST00000569140 GABRR3A8MPY1 467 aa11.94□□□□□ -0.5
CDT1-203ENST00000569140 MAN1A2O60476 641 aa11.94□□□□□ -0.5
CDT1-203ENST00000569140 PEX11AO75192 247 aa11.94□□□□□ -0.5
CDT1-203ENST00000569140 ATP6AP2O75787 350 aa11.94□□□□□ -0.5
CDT1-203ENST00000569140 WDPCPO95876 746 aa11.94□□□□□ -0.5
CDT1-203ENST00000569140 FGF4P08620 206 aa11.94□□□□□ -0.5
CDT1-203ENST00000569140 XKP51811 444 aa11.94□□□□□ -0.5
CDT1-203ENST00000569140 WDR4P57081 412 aaKnown RBP11.94□□□□□ -0.5
CDT1-203ENST00000569140 ERVK-8P63133 956 aa11.94□□□□□ -0.5
CDT1-203ENST00000569140 IGLV3-21P80748 117 aaPredicted RBP11.94□□□□□ -0.5
CDT1-203ENST00000569140 C2orf80Q0P641 193 aa11.94□□□□□ -0.5
CDT1-203ENST00000569140 BIKQ13323 160 aa11.94□□□□□ -0.5
CDT1-203ENST00000569140 HEPACAMQ14CZ8 416 aa11.94□□□□□ -0.5
CDT1-203ENST00000569140 ATP6AP1LQ52LC2 224 aa11.94□□□□□ -0.5
CDT1-203ENST00000569140 NOXRED1Q6NXP6 359 aa11.94□□□□□ -0.5
CDT1-203ENST00000569140 HSDL2Q6YN16 418 aa11.94□□□□□ -0.5
CDT1-203ENST00000569140 DGAT2L6Q6ZPD8 337 aa11.94□□□□□ -0.5
CDT1-203ENST00000569140 RPS19BP1Q86WX3 136 aaKnown RBP11.94□□□□□ -0.5
CDT1-203ENST00000569140 TRIM42Q8IWZ5 723 aa11.94□□□□□ -0.5
CDT1-203ENST00000569140 ZNF781Q8N8C0 355 aa11.94□□□□□ -0.5
CDT1-203ENST00000569140 ZNF321PQ8N8H1 164 aa11.94□□□□□ -0.5
CDT1-203ENST00000569140 APCDD1LQ8NCL9 501 aa11.94□□□□□ -0.5
CDT1-203ENST00000569140 CATSPER1Q8NEC5 780 aa11.94□□□□□ -0.5
CDT1-203ENST00000569140 OR1N1Q8NGS0 311 aa11.94□□□□□ -0.5
CDT1-203ENST00000569140 DYDC1Q8WWB3 177 aa11.94□□□□□ -0.5
CDT1-203ENST00000569140 PNPLA2Q96AD5 504 aa11.94□□□□□ -0.5
CDT1-203ENST00000569140 C19orf60Q96EN9 201 aa11.94□□□□□ -0.5
CDT1-203ENST00000569140 BRINP2Q9C0B6 783 aa11.94□□□□□ -0.5
CDT1-203ENST00000569140 EPN3Q9H201 632 aa11.94□□□□□ -0.5
CDT1-203ENST00000569140 HEY2Q9UBP5 337 aa11.94□□□□□ -0.5
CDT1-203ENST00000569140 GIMAP2Q9UG22 337 aa11.94□□□□□ -0.5
CDT1-203ENST00000569140 ERVK-19Q9WJR5 959 aa11.94□□□□□ -0.5
CDT1-203ENST00000569140 ENTPD4Q9Y227 616 aa11.94□□□□□ -0.5
CDT1-203ENST00000569140 RAP2CQ9Y3L5 183 aa11.94□□□□□ -0.5
CDT1-203ENST00000569140 HMGB1P1B2RPK0 211 aaPredicted RBP11.93□□□□□ -0.5
CDT1-203ENST00000569140 PYCARD-AS1I3L0S3 204 aa11.93□□□□□ -0.5
CDT1-203ENST00000569140 SUV39H1O43463 412 aa11.93□□□□□ -0.5
CDT1-203ENST00000569140 ZFAND5O76080 213 aa11.93□□□□□ -0.5
CDT1-203ENST00000569140 DDAH2O95865 285 aa11.93□□□□□ -0.5
CDT1-203ENST00000569140 SLC35E2P0CK97 266 aa11.93□□□□□ -0.5
CDT1-203ENST00000569140 CPMP14384 443 aa11.93□□□□□ -0.5
CDT1-203ENST00000569140 PORP16435 677 aaPredicted RBP11.93□□□□□ -0.5
CDT1-203ENST00000569140 CSNK2A2P19784 350 aaPredicted RBP11.93□□□□□ -0.5
CDT1-203ENST00000569140 PTGER1P34995 402 aa11.93□□□□□ -0.5
CDT1-203ENST00000569140 GSTM5P46439 218 aa11.93□□□□□ -0.5
CDT1-203ENST00000569140 RPL14P50914 215 aaKnown RBP11.93□□□□□ -0.5
CDT1-203ENST00000569140 MLLT10P55197 1068 aa11.93□□□□□ -0.5
CDT1-203ENST00000569140 BST1Q10588 318 aa11.93□□□□□ -0.5
CDT1-203ENST00000569140 ZNF169Q14929 603 aaPredicted RBP11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 138 ms