RNA–Protein interactions for RNA: ENST00000568034.1

COMMD4-222, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 1,085 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-222ENST00000568034 EXOSC8Q96B26 276 aaKnown RBP16.83■□□□□ 0.28
COMMD4-222ENST00000568034 KLHL29Q96CT2 875 aa16.83■□□□□ 0.28
COMMD4-222ENST00000568034 CATSPER2Q96P56 530 aa16.83■□□□□ 0.28
COMMD4-222ENST00000568034 CCDC28BQ9BUN5 200 aa16.83■□□□□ 0.28
COMMD4-222ENST00000568034 REEP4Q9H6H4 257 aa16.83■□□□□ 0.28
COMMD4-222ENST00000568034 EPG5Q9HCE0 2579 aa16.83■□□□□ 0.28
COMMD4-222ENST00000568034 ADAP2Q9NPF8 381 aa16.83■□□□□ 0.28
COMMD4-222ENST00000568034 TAS2R7Q9NYW3 318 aa16.83■□□□□ 0.28
COMMD4-222ENST00000568034 DCTN4Q9UJW0 460 aa16.83■□□□□ 0.28
COMMD4-222ENST00000568034 MAN2B2Q9Y2E5 1009 aa16.83■□□□□ 0.28
COMMD4-222ENST00000568034 GPR45Q9Y5Y3 372 aa16.83■□□□□ 0.28
COMMD4-222ENST00000568034 SYNDIG1LA6NDD5 238 aa16.82■□□□□ 0.28
COMMD4-222ENST00000568034 SAGE2PA6NJ88 616 aa16.82■□□□□ 0.28
COMMD4-222ENST00000568034 ARGFXA6NJG6 315 aa16.82■□□□□ 0.28
COMMD4-222ENST00000568034 PEX12O00623 359 aa16.82■□□□□ 0.28
COMMD4-222ENST00000568034 POLR3GO15318 223 aaPredicted RBP16.82■□□□□ 0.28
COMMD4-222ENST00000568034 AKAP10O43572 662 aa16.82■□□□□ 0.28
COMMD4-222ENST00000568034 CPMP14384 443 aa16.82■□□□□ 0.28
COMMD4-222ENST00000568034 PIK3R1P27986 724 aa16.82■□□□□ 0.28
COMMD4-222ENST00000568034 LSP1P33241 339 aa16.82■□□□□ 0.28
COMMD4-222ENST00000568034 C21orf58P58505 322 aa16.82■□□□□ 0.28
COMMD4-222ENST00000568034 CHAF1BQ13112 559 aa16.82■□□□□ 0.28
COMMD4-222ENST00000568034 ELAVL1Q15717 326 aaKnown RBP16.82■□□□□ 0.28
COMMD4-222ENST00000568034 MPEG1Q2M385 716 aa16.82■□□□□ 0.28
COMMD4-222ENST00000568034 COL28A1Q2UY09 1125 aa16.82■□□□□ 0.28
COMMD4-222ENST00000568034 NXNQ6DKJ4 435 aa16.82■□□□□ 0.28
COMMD4-222ENST00000568034 ANKRD26P1Q6NSI1 321 aa16.82■□□□□ 0.28
COMMD4-222ENST00000568034 C19orf48Q6RUI8 117 aa16.82■□□□□ 0.28
COMMD4-222ENST00000568034 ST13P4Q8IZP2 240 aaPredicted RBP16.82■□□□□ 0.28
COMMD4-222ENST00000568034 KRTCAP2Q8N6L1 136 aa16.82■□□□□ 0.28
COMMD4-222ENST00000568034 PTPMT1Q8WUK0 201 aaPredicted RBP16.82■□□□□ 0.28
COMMD4-222ENST00000568034 MARK4Q96L34 752 aa16.82■□□□□ 0.28
COMMD4-222ENST00000568034 SIKE1Q9BRV8 207 aa16.82■□□□□ 0.28
COMMD4-222ENST00000568034 TRIM55Q9BYV6 548 aa16.82■□□□□ 0.28
COMMD4-222ENST00000568034 BRINP2Q9C0B6 783 aa16.82■□□□□ 0.28
COMMD4-222ENST00000568034 ZNF160Q9HCG1 818 aa16.82■□□□□ 0.28
COMMD4-222ENST00000568034 TCF7L2Q9NQB0 619 aa16.82■□□□□ 0.28
COMMD4-222ENST00000568034 SLC35C2Q9NQQ7 365 aa16.82■□□□□ 0.28
COMMD4-222ENST00000568034 PNO1Q9NRX1 252 aaKnown RBP16.82■□□□□ 0.28
COMMD4-222ENST00000568034 ATP6V1HQ9UI12 483 aa16.82■□□□□ 0.28
COMMD4-222ENST00000568034 KCNMB2Q9Y691 235 aa16.82■□□□□ 0.28
COMMD4-222ENST00000568034 NSG1A0A0A6YYJ2 146 aa16.81■□□□□ 0.28
COMMD4-222ENST00000568034 A8MUA0 341 aa16.81■□□□□ 0.28
COMMD4-222ENST00000568034 SCAMP2O15127 329 aaKnown RBP16.81■□□□□ 0.28
COMMD4-222ENST00000568034 ERAL1O75616 437 aaKnown RBP16.81■□□□□ 0.28
COMMD4-222ENST00000568034 CELA2AP08217 269 aa16.81■□□□□ 0.28
COMMD4-222ENST00000568034 SLC35E2P0CK97 266 aa16.81■□□□□ 0.28
COMMD4-222ENST00000568034 SOX18P35713 384 aa16.81■□□□□ 0.28
COMMD4-222ENST00000568034 FEN1P39748 380 aaKnown RBP16.81■□□□□ 0.28
COMMD4-222ENST00000568034 XKP51811 444 aa16.81■□□□□ 0.28
COMMD4-222ENST00000568034 CLDN8P56748 225 aa16.81■□□□□ 0.28
COMMD4-222ENST00000568034 SLC26A5P58743 744 aa16.81■□□□□ 0.28
COMMD4-222ENST00000568034 ACTN3Q08043 901 aaPredicted RBP16.81■□□□□ 0.28
COMMD4-222ENST00000568034 TERF2Q15554 542 aa16.81■□□□□ 0.28
COMMD4-222ENST00000568034 ACAD11Q709F0 780 aa16.81■□□□□ 0.28
COMMD4-222ENST00000568034 TMEM102Q8N9M5 508 aaPredicted RBP16.81■□□□□ 0.28
COMMD4-222ENST00000568034 SUN3Q8TAQ9 357 aa16.81■□□□□ 0.28
COMMD4-222ENST00000568034 PPWD1Q96BP3 646 aaKnown RBP16.81■□□□□ 0.28
COMMD4-222ENST00000568034 CHMP6Q96FZ7 201 aa16.81■□□□□ 0.28
COMMD4-222ENST00000568034 LPAR4Q99677 370 aa16.81■□□□□ 0.28
COMMD4-222ENST00000568034 TUBB6Q9BUF5 446 aa16.81■□□□□ 0.28
COMMD4-222ENST00000568034 SLAMF7Q9NQ25 335 aa16.81■□□□□ 0.28
COMMD4-222ENST00000568034 MIEF1Q9NQG6 463 aa16.81■□□□□ 0.28
COMMD4-222ENST00000568034 PPIEQ9UNP9 301 aaKnown RBP16.81■□□□□ 0.28
COMMD4-222ENST00000568034 MGAQ8IWI9 3026 aa16.8■□□□□ 0.28
COMMD4-222ENST00000568034 KMT2BQ9UMN6 2715 aaPredicted RBP16.8■□□□□ 0.28
COMMD4-222ENST00000568034 GABRR3A8MPY1 467 aa16.8■□□□□ 0.28
COMMD4-222ENST00000568034 E9PBE3 544 aa16.8■□□□□ 0.28
COMMD4-222ENST00000568034 KLHL41O60662 606 aa16.8■□□□□ 0.28
COMMD4-222ENST00000568034 DDAH2O95865 285 aa16.8■□□□□ 0.28
COMMD4-222ENST00000568034 IFNA16P05015 189 aa16.8■□□□□ 0.28
COMMD4-222ENST00000568034 PORP16435 677 aaPredicted RBP16.8■□□□□ 0.28
COMMD4-222ENST00000568034 GPR143P51810 404 aa16.8■□□□□ 0.28
COMMD4-222ENST00000568034 SEC24CP53992 1094 aa16.8■□□□□ 0.28
COMMD4-222ENST00000568034 GNGT1P63211 74 aa16.8■□□□□ 0.28
COMMD4-222ENST00000568034 PLIN5Q00G26 463 aa16.8■□□□□ 0.28
COMMD4-222ENST00000568034 BIKQ13323 160 aa16.8■□□□□ 0.28
COMMD4-222ENST00000568034 APLFQ8IW19 511 aaPredicted RBP16.8■□□□□ 0.28
COMMD4-222ENST00000568034 C7orf57Q8NEG2 295 aa16.8■□□□□ 0.28
COMMD4-222ENST00000568034 DOK4Q8TEW6 326 aa16.8■□□□□ 0.28
COMMD4-222ENST00000568034 MTERF3Q96E29 417 aa16.8■□□□□ 0.28
COMMD4-222ENST00000568034 VPS50Q96JG6 964 aa16.8■□□□□ 0.28
COMMD4-222ENST00000568034 TEX37Q96LM6 180 aa16.8■□□□□ 0.28
COMMD4-222ENST00000568034 FER1L6-AS2Q96M78 137 aa16.8■□□□□ 0.28
COMMD4-222ENST00000568034 DGAT2Q96PD7 388 aa16.8■□□□□ 0.28
COMMD4-222ENST00000568034 ING2Q9H160 280 aa16.8■□□□□ 0.28
COMMD4-222ENST00000568034 PSME2Q9UL46 239 aa16.8■□□□□ 0.28
COMMD4-222ENST00000568034 CROCCQ5TZA2 2017 aa16.8■□□□□ 0.28
COMMD4-222ENST00000568034 A0A0G2JND7 137 aa16.79■□□□□ 0.28
COMMD4-222ENST00000568034 MYO1GB0I1T2 1018 aa16.79■□□□□ 0.28
COMMD4-222ENST00000568034 C17orf105B2RV13 164 aa16.79■□□□□ 0.28
COMMD4-222ENST00000568034 UBDO15205 165 aa16.79■□□□□ 0.28
COMMD4-222ENST00000568034 DNAJB5O75953 348 aa16.79■□□□□ 0.28
COMMD4-222ENST00000568034 ATP1B1P05026 303 aa16.79■□□□□ 0.28
COMMD4-222ENST00000568034 CT62P0C5K7 136 aa16.79■□□□□ 0.28
COMMD4-222ENST00000568034 TROVE2P10155 538 aaKnown RBP eCLIP16.79■□□□□ 0.28
COMMD4-222ENST00000568034 CSNK2A2P19784 350 aaPredicted RBP16.79■□□□□ 0.28
COMMD4-222ENST00000568034 PRPS1L1P21108 318 aa16.79■□□□□ 0.28
COMMD4-222ENST00000568034 IL12AP29459 219 aa16.79■□□□□ 0.28
COMMD4-222ENST00000568034 GALNSP34059 522 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms