RNA–Protein interactions for RNA: ENST00000567880.5

TCF4-236, Transcript of transcription factor 4, humanhuman

TSL 1 (best) BASIC

Gene TCF4, Length 1,948 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-236ENST00000567880 RPF2Q9H7B2 306 aaKnown RBP9.85□□□□□ -0.83
TCF4-236ENST00000567880 LYRM4Q9HD34 91 aa9.85□□□□□ -0.83
TCF4-236ENST00000567880 SLC35C2Q9NQQ7 365 aa9.85□□□□□ -0.83
TCF4-236ENST00000567880 EHD3Q9NZN3 535 aa9.85□□□□□ -0.83
TCF4-236ENST00000567880 GMPR2Q9P2T1 348 aaKnown RBP9.85□□□□□ -0.83
TCF4-236ENST00000567880 ENTPD4Q9Y227 616 aa9.85□□□□□ -0.83
TCF4-236ENST00000567880 SNX8Q9Y5X2 465 aa9.85□□□□□ -0.83
TCF4-236ENST00000567880 C15orf38-AP3S2A0A0A6YYH1 394 aa9.84□□□□□ -0.83
TCF4-236ENST00000567880 A0A1W2PS29 197 aa9.84□□□□□ -0.83
TCF4-236ENST00000567880 FAM227AF5H4B4 570 aa9.84□□□□□ -0.83
TCF4-236ENST00000567880 ZNF749O43361 778 aa9.84□□□□□ -0.83
TCF4-236ENST00000567880 TBX19O60806 448 aa9.84□□□□□ -0.83
TCF4-236ENST00000567880 LRP3O75074 770 aa9.84□□□□□ -0.83
TCF4-236ENST00000567880 CBFA2T3O75081 653 aa9.84□□□□□ -0.83
TCF4-236ENST00000567880 NSA2O95478 260 aaKnown RBP9.84□□□□□ -0.83
TCF4-236ENST00000567880 C1QCP02747 245 aa9.84□□□□□ -0.83
TCF4-236ENST00000567880 MSL3P1P0C860 447 aa9.84□□□□□ -0.83
TCF4-236ENST00000567880 ME2P23368 584 aa9.84□□□□□ -0.83
TCF4-236ENST00000567880 PTPN6P29350 595 aa9.84□□□□□ -0.83
TCF4-236ENST00000567880 NTSP30990 170 aa9.84□□□□□ -0.83
TCF4-236ENST00000567880 CSTF2P33240 577 aaKnown RBP eCLIP9.84□□□□□ -0.83
TCF4-236ENST00000567880 PTGER1P34995 402 aa9.84□□□□□ -0.83
TCF4-236ENST00000567880 LRRC74AQ0VAA2 488 aa9.84□□□□□ -0.83
TCF4-236ENST00000567880 GAB1Q13480 694 aa9.84□□□□□ -0.83
TCF4-236ENST00000567880 CLPPQ16740 277 aaPredicted RBP9.84□□□□□ -0.83
TCF4-236ENST00000567880 CMPK2Q5EBM0 449 aa9.84□□□□□ -0.83
TCF4-236ENST00000567880 SAMD4BQ5PRF9 694 aaKnown RBP9.84□□□□□ -0.83
TCF4-236ENST00000567880 PGM2L1Q6PCE3 622 aa9.84□□□□□ -0.83
TCF4-236ENST00000567880 ANGPTL8Q6UXH0 198 aa9.84□□□□□ -0.83
TCF4-236ENST00000567880 ARPINQ7Z6K5 226 aa9.84□□□□□ -0.83
TCF4-236ENST00000567880 OR4N5Q8IXE1 308 aa9.84□□□□□ -0.83
TCF4-236ENST00000567880 OR5AK3PQ8NH89 298 aa9.84□□□□□ -0.83
TCF4-236ENST00000567880 PNPT1Q8TCS8 783 aaKnown RBP9.84□□□□□ -0.83
TCF4-236ENST00000567880 WDR60Q8WVS4 1066 aa9.84□□□□□ -0.83
TCF4-236ENST00000567880 CNRIP1Q96F85 164 aaPredicted RBP9.84□□□□□ -0.83
TCF4-236ENST00000567880 ZBED6CLQ96FA7 236 aaPredicted RBP9.84□□□□□ -0.83
TCF4-236ENST00000567880 PEX11GQ96HA9 241 aa9.84□□□□□ -0.83
TCF4-236ENST00000567880 YIPF2Q9BWQ6 316 aa9.84□□□□□ -0.83
TCF4-236ENST00000567880 NPLQ9BXD5 320 aaPredicted RBP9.84□□□□□ -0.83
TCF4-236ENST00000567880 IKZF5Q9H5V7 419 aa9.84□□□□□ -0.83
TCF4-236ENST00000567880 OCIAD1Q9NX40 245 aa9.84□□□□□ -0.83
TCF4-236ENST00000567880 TAS2R9Q9NYW1 312 aa9.84□□□□□ -0.83
TCF4-236ENST00000567880 ABCD2Q9UBJ2 740 aa9.84□□□□□ -0.83
TCF4-236ENST00000567880 VPS4AQ9UN37 437 aa9.84□□□□□ -0.83
TCF4-236ENST00000567880 TMEM184BQ9Y519 407 aaPredicted RBP9.84□□□□□ -0.83
TCF4-236ENST00000567880 FAM186AA6NE01 2351 aa9.84□□□□□ -0.83
TCF4-236ENST00000567880 NUP210LQ5VU65 1888 aa9.84□□□□□ -0.83
TCF4-236ENST00000567880 ZNF292O60281 2723 aa9.84□□□□□ -0.83
TCF4-236ENST00000567880 TRBV5-3A0A0A0MS03 114 aa9.84□□□□□ -0.83
TCF4-236ENST00000567880 LDB3O75112 727 aa9.84□□□□□ -0.83
TCF4-236ENST00000567880 CDC123O75794 336 aaPredicted RBP9.84□□□□□ -0.83
TCF4-236ENST00000567880 NTRK1P04629 796 aa9.84□□□□□ -0.83
TCF4-236ENST00000567880 TGM1P22735 817 aa9.84□□□□□ -0.83
TCF4-236ENST00000567880 GPC1P35052 558 aa9.84□□□□□ -0.83
TCF4-236ENST00000567880 OR1D4P47884 311 aa9.84□□□□□ -0.83
TCF4-236ENST00000567880 ST13P50502 369 aaKnown RBP9.84□□□□□ -0.83
TCF4-236ENST00000567880 NCBP2P52298 156 aaKnown RBP eCLIP9.84□□□□□ -0.83
TCF4-236ENST00000567880 HNRNPFP52597 415 aaKnown RBP9.84□□□□□ -0.83
TCF4-236ENST00000567880 PCBP4P57723 403 aaKnown RBP9.84□□□□□ -0.83
TCF4-236ENST00000567880 RAB38P57729 211 aa9.84□□□□□ -0.83
TCF4-236ENST00000567880 ID2Q02363 134 aa9.84□□□□□ -0.83
TCF4-236ENST00000567880 LIPEQ05469 1076 aa9.84□□□□□ -0.83
TCF4-236ENST00000567880 KPNB1Q14974 876 aaKnown RBP9.84□□□□□ -0.83
TCF4-236ENST00000567880 C16orf72Q14CZ0 275 aa9.84□□□□□ -0.83
TCF4-236ENST00000567880 RUNDC3AQ59EK9 446 aa9.84□□□□□ -0.83
TCF4-236ENST00000567880 C6orf163Q5TEZ5 329 aa9.84□□□□□ -0.83
TCF4-236ENST00000567880 C1orf189Q5VU69 101 aa9.84□□□□□ -0.83
TCF4-236ENST00000567880 OR52E8Q6IFG1 317 aa9.84□□□□□ -0.83
TCF4-236ENST00000567880 NIPAL1Q6NVV3 410 aa9.84□□□□□ -0.83
TCF4-236ENST00000567880 ATCAYQ86WG3 371 aa9.84□□□□□ -0.83
TCF4-236ENST00000567880 TMEM52Q8NDY8 209 aa9.84□□□□□ -0.83
TCF4-236ENST00000567880 HIPK4Q8NE63 616 aa9.84□□□□□ -0.83
TCF4-236ENST00000567880 OR8J3Q8NGG0 315 aa9.84□□□□□ -0.83
TCF4-236ENST00000567880 OR10A6Q8NH74 314 aa9.84□□□□□ -0.83
TCF4-236ENST00000567880 ZDHHC19Q8WVZ1 309 aaPredicted RBP9.84□□□□□ -0.83
TCF4-236ENST00000567880 ECSITQ9BQ95 431 aa9.84□□□□□ -0.83
TCF4-236ENST00000567880 CPPED1Q9BRF8 314 aaPredicted RBP9.84□□□□□ -0.83
TCF4-236ENST00000567880 PCDHAC1Q9H158 963 aa9.84□□□□□ -0.83
TCF4-236ENST00000567880 DENND2DQ9H6A0 471 aaPredicted RBP9.84□□□□□ -0.83
TCF4-236ENST00000567880 GIMAP4Q9NUV9 329 aa9.84□□□□□ -0.83
TCF4-236ENST00000567880 TAS2R7Q9NYW3 318 aa9.84□□□□□ -0.83
TCF4-236ENST00000567880 LUZP4Q9P127 313 aa9.84□□□□□ -0.83
TCF4-236ENST00000567880 ACSL6Q9UKU0 697 aa9.84□□□□□ -0.83
TCF4-236ENST00000567880 CES1P1Q9UKY3 287 aa9.84□□□□□ -0.83
TCF4-236ENST00000567880 RARRES3Q9UL19 164 aa9.84□□□□□ -0.83
TCF4-236ENST00000567880 PSME2Q9UL46 239 aa9.84□□□□□ -0.83
TCF4-236ENST00000567880 USP22Q9UPT9 525 aa9.84□□□□□ -0.83
TCF4-236ENST00000567880 POMPQ9Y244 141 aa9.84□□□□□ -0.83
TCF4-236ENST00000567880 HCN4Q9Y3Q4 1203 aa9.84□□□□□ -0.83
TCF4-236ENST00000567880 ZNF780BQ9Y6R6 833 aa9.84□□□□□ -0.83
TCF4-236ENST00000567880 CNOT1A5YKK6 2376 aaKnown RBP9.83□□□□□ -0.84
TCF4-236ENST00000567880 MYOCOSA0A1B0GUC4 107 aa9.83□□□□□ -0.84
TCF4-236ENST00000567880 A6NHS1 94 aa9.83□□□□□ -0.84
TCF4-236ENST00000567880 EFCAB7A8K855 629 aa9.83□□□□□ -0.84
TCF4-236ENST00000567880 CLIC1O00299 241 aa9.83□□□□□ -0.84
TCF4-236ENST00000567880 CYR61O00622 381 aa9.83□□□□□ -0.84
TCF4-236ENST00000567880 RNH1P13489 461 aaKnown RBP9.83□□□□□ -0.84
TCF4-236ENST00000567880 HOXB9P17482 250 aaPredicted RBP9.83□□□□□ -0.84
TCF4-236ENST00000567880 PDX1P52945 283 aa9.83□□□□□ -0.84
TCF4-236ENST00000567880 EMP3P54852 163 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms