RNA–Protein interactions for RNA: ENST00000566560.5

KARS-207, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene KARS, Length 1,231 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-207ENST00000566560 ACTN3Q08043 901 aaPredicted RBP10.76□□□□□ -0.69
KARS-207ENST00000566560 C2orf80Q0P641 193 aa10.76□□□□□ -0.69
KARS-207ENST00000566560 SF3A3Q12874 501 aaKnown RBP eCLIP10.76□□□□□ -0.69
KARS-207ENST00000566560 SSPNQ14714 243 aa10.76□□□□□ -0.69
KARS-207ENST00000566560 NSDHLQ15738 373 aa10.76□□□□□ -0.69
KARS-207ENST00000566560 UGT8Q16880 541 aa10.76□□□□□ -0.69
KARS-207ENST00000566560 ATP1A1-AS1Q5TC04 95 aa10.76□□□□□ -0.69
KARS-207ENST00000566560 TMEM198Q66K66 360 aa10.76□□□□□ -0.69
KARS-207ENST00000566560 FAM71E1Q6IPT2 247 aa10.76□□□□□ -0.69
KARS-207ENST00000566560 SLC48A1Q6P1K1 146 aa10.76□□□□□ -0.69
KARS-207ENST00000566560 CCDC81Q6ZN84 652 aa10.76□□□□□ -0.69
KARS-207ENST00000566560 SPATA19Q7Z5L4 167 aa10.76□□□□□ -0.69
KARS-207ENST00000566560 OR4N5Q8IXE1 308 aa10.76□□□□□ -0.69
KARS-207ENST00000566560 FAM9CQ8IZT9 166 aa10.76□□□□□ -0.69
KARS-207ENST00000566560 ZSCAN1Q8NBB4 408 aa10.76□□□□□ -0.69
KARS-207ENST00000566560 PLPP5Q8NEB5 264 aa10.76□□□□□ -0.69
KARS-207ENST00000566560 PUM2Q8TB72 1066 aaKnown RBP eCLIP10.76□□□□□ -0.69
KARS-207ENST00000566560 DNAJB14Q8TBM8 379 aa10.76□□□□□ -0.69
KARS-207ENST00000566560 ADAMTS17Q8TE56 1095 aa10.76□□□□□ -0.69
KARS-207ENST00000566560 TANKQ92844 425 aa10.76□□□□□ -0.69
KARS-207ENST00000566560 UCN3Q969E3 161 aa10.76□□□□□ -0.69
KARS-207ENST00000566560 EXOSC8Q96B26 276 aaKnown RBP10.76□□□□□ -0.69
KARS-207ENST00000566560 C8orf44Q96CB5 159 aa10.76□□□□□ -0.69
KARS-207ENST00000566560 EGLN2Q96KS0 407 aa10.76□□□□□ -0.69
KARS-207ENST00000566560 MESP1Q9BRJ9 268 aa10.76□□□□□ -0.69
KARS-207ENST00000566560 ZFAND3Q9H8U3 227 aa10.76□□□□□ -0.69
KARS-207ENST00000566560 NECTIN3Q9NQS3 549 aa10.76□□□□□ -0.69
KARS-207ENST00000566560 GIMAP4Q9NUV9 329 aa10.76□□□□□ -0.69
KARS-207ENST00000566560 EHD3Q9NZN3 535 aa10.76□□□□□ -0.69
KARS-207ENST00000566560 KLHL14Q9P2G3 628 aa10.76□□□□□ -0.69
KARS-207ENST00000566560 UTS2RQ9UKP6 389 aa10.76□□□□□ -0.69
KARS-207ENST00000566560 ENTPD4Q9Y227 616 aa10.76□□□□□ -0.69
KARS-207ENST00000566560 WBP11Q9Y2W2 641 aaKnown RBP10.76□□□□□ -0.69
KARS-207ENST00000566560 HS3ST3B1Q9Y662 390 aa10.76□□□□□ -0.69
KARS-207ENST00000566560 PCSK5Q92824 1860 aa10.75□□□□□ -0.69
KARS-207ENST00000566560 TCRBV16S1A1N1A0A5B0 115 aa10.75□□□□□ -0.69
KARS-207ENST00000566560 GMNCA6NCL1 334 aa10.75□□□□□ -0.69
KARS-207ENST00000566560 WASHC1A8K0Z3 465 aa10.75□□□□□ -0.69
KARS-207ENST00000566560 SOCS6O14544 535 aa10.75□□□□□ -0.69
KARS-207ENST00000566560 SCAMP2O15127 329 aaKnown RBP10.75□□□□□ -0.69
KARS-207ENST00000566560 PGRMC2O15173 223 aa10.75□□□□□ -0.69
KARS-207ENST00000566560 UBDO15205 165 aa10.75□□□□□ -0.69
KARS-207ENST00000566560 NKX2-8O15522 239 aa10.75□□□□□ -0.69
KARS-207ENST00000566560 ERAL1O75616 437 aaKnown RBP10.75□□□□□ -0.69
KARS-207ENST00000566560 FURINP09958 794 aa10.75□□□□□ -0.69
KARS-207ENST00000566560 COX7A2P14406 83 aa10.75□□□□□ -0.69
KARS-207ENST00000566560 PIK3R1P27986 724 aa10.75□□□□□ -0.69
KARS-207ENST00000566560 ITPKBP27987 946 aa10.75□□□□□ -0.69
KARS-207ENST00000566560 RPL3P39023 403 aaKnown RBP10.75□□□□□ -0.69
KARS-207ENST00000566560 ARFIP2P53365 341 aa10.75□□□□□ -0.69
KARS-207ENST00000566560 STX1BP61266 288 aa10.75□□□□□ -0.69
KARS-207ENST00000566560 ATP1A4Q13733 1029 aa10.75□□□□□ -0.69
KARS-207ENST00000566560 SERTAD2Q14140 314 aa10.75□□□□□ -0.69
KARS-207ENST00000566560 SFT2D3Q587I9 215 aa10.75□□□□□ -0.69
KARS-207ENST00000566560 ANKRD26P1Q6NSI1 321 aa10.75□□□□□ -0.69
KARS-207ENST00000566560 TMEM205Q6UW68 189 aa10.75□□□□□ -0.69
KARS-207ENST00000566560 R3HCC1LQ7Z5L2 792 aaKnown RBP10.75□□□□□ -0.69
KARS-207ENST00000566560 ANKRD37Q7Z713 158 aa10.75□□□□□ -0.69
KARS-207ENST00000566560 TICAM1Q8IUC6 712 aa10.75□□□□□ -0.69
KARS-207ENST00000566560 KRTCAP2Q8N6L1 136 aa10.75□□□□□ -0.69
KARS-207ENST00000566560 OR4K14Q8NGD5 310 aa10.75□□□□□ -0.69
KARS-207ENST00000566560 ANKRD9Q96BM1 317 aaPredicted RBP10.75□□□□□ -0.69
KARS-207ENST00000566560 PPCDCQ96CD2 204 aa10.75□□□□□ -0.69
KARS-207ENST00000566560 VPS50Q96JG6 964 aa10.75□□□□□ -0.69
KARS-207ENST00000566560 RILPQ96NA2 401 aa10.75□□□□□ -0.69
KARS-207ENST00000566560 CATSPER2Q96P56 530 aa10.75□□□□□ -0.69
KARS-207ENST00000566560 IP6K3Q96PC2 410 aa10.75□□□□□ -0.69
KARS-207ENST00000566560 REEP4Q9H6H4 257 aa10.75□□□□□ -0.69
KARS-207ENST00000566560 KCNK13Q9HB14 408 aa10.75□□□□□ -0.69
KARS-207ENST00000566560 ADAP2Q9NPF8 381 aa10.75□□□□□ -0.69
KARS-207ENST00000566560 G3BP2Q9UN86 482 aaKnown RBP10.75□□□□□ -0.69
KARS-207ENST00000566560 CLDN16Q9Y5I7 305 aa10.75□□□□□ -0.69
KARS-207ENST00000566560 LOC102723996A0A087X1L8 192 aa10.74□□□□□ -0.69
KARS-207ENST00000566560 IGHV3-20A0A0C4DH32 117 aa10.74□□□□□ -0.69
KARS-207ENST00000566560 MYOCOSA0A1B0GUC4 107 aa10.74□□□□□ -0.69
KARS-207ENST00000566560 A0A1W2PS29 197 aa10.74□□□□□ -0.69
KARS-207ENST00000566560 PEX12O00623 359 aa10.74□□□□□ -0.69
KARS-207ENST00000566560 OR10H2O60403 315 aa10.74□□□□□ -0.69
KARS-207ENST00000566560 GPR75O95800 540 aa10.74□□□□□ -0.69
KARS-207ENST00000566560 IFNA16P05015 189 aa10.74□□□□□ -0.69
KARS-207ENST00000566560 COX6A1P12074 109 aa10.74□□□□□ -0.69
KARS-207ENST00000566560 CPMP14384 443 aa10.74□□□□□ -0.69
KARS-207ENST00000566560 DDX5P17844 614 aaKnown RBP10.74□□□□□ -0.69
KARS-207ENST00000566560 PRPS1L1P21108 318 aa10.74□□□□□ -0.69
KARS-207ENST00000566560 DRD4P21917 467 aa10.74□□□□□ -0.69
KARS-207ENST00000566560 NTSP30990 170 aa10.74□□□□□ -0.69
KARS-207ENST00000566560 SMCPP49901 116 aaPredicted RBP10.74□□□□□ -0.69
KARS-207ENST00000566560 NME5P56597 212 aa10.74□□□□□ -0.69
KARS-207ENST00000566560 CLDN8P56748 225 aa10.74□□□□□ -0.69
KARS-207ENST00000566560 OR4D2P58180 307 aa10.74□□□□□ -0.69
KARS-207ENST00000566560 IGLV3-21P80748 117 aaPredicted RBP10.74□□□□□ -0.69
KARS-207ENST00000566560 PDE7AQ13946 482 aa10.74□□□□□ -0.69
KARS-207ENST00000566560 RPS6KA2Q15349 733 aa10.74□□□□□ -0.69
KARS-207ENST00000566560 GSTA3Q16772 222 aa10.74□□□□□ -0.69
KARS-207ENST00000566560 PDCD4Q53EL6 469 aaKnown RBP10.74□□□□□ -0.69
KARS-207ENST00000566560 CRTC2Q53ET0 693 aaPredicted RBP10.74□□□□□ -0.69
KARS-207ENST00000566560 FAM180BQ6P0A1 224 aa10.74□□□□□ -0.69
KARS-207ENST00000566560 KIRREL2Q6UWL6 708 aa10.74□□□□□ -0.69
KARS-207ENST00000566560 SPATA21Q7Z572 469 aa10.74□□□□□ -0.69
KARS-207ENST00000566560 CPEB2Q7Z5Q1 589 aaKnown RBP10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms