RNA–Protein interactions for RNA: ENST00000566136.1

UBFD1-205, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 2,485 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-205ENST00000566136 EMCNQ9ULC0 261 aa10.09□□□□□ -0.79
UBFD1-205ENST00000566136 MAB21L2Q9Y586 359 aa10.09□□□□□ -0.79
UBFD1-205ENST00000566136 TTC3P53804 2025 aa10.09□□□□□ -0.79
UBFD1-205ENST00000566136 KLF11O14901 512 aa10.09□□□□□ -0.79
UBFD1-205ENST00000566136 PRPS2P11908 318 aa10.09□□□□□ -0.79
UBFD1-205ENST00000566136 MC3RP41968 323 aa10.09□□□□□ -0.79
UBFD1-205ENST00000566136 WDR5P61964 334 aaKnown RBP10.09□□□□□ -0.79
UBFD1-205ENST00000566136 DEFB103AP81534 67 aa10.09□□□□□ -0.79
UBFD1-205ENST00000566136 PDLIM3Q53GG5 364 aaPredicted RBP10.09□□□□□ -0.79
UBFD1-205ENST00000566136 DCAF12L2Q5VW00 463 aa10.09□□□□□ -0.79
UBFD1-205ENST00000566136 RFWD3Q6PCD5 774 aa10.09□□□□□ -0.79
UBFD1-205ENST00000566136 SPRED2Q7Z698 418 aa10.09□□□□□ -0.79
UBFD1-205ENST00000566136 CMC1Q7Z7K0 106 aa10.09□□□□□ -0.79
UBFD1-205ENST00000566136 ZDHHC23Q8IYP9 409 aa10.09□□□□□ -0.79
UBFD1-205ENST00000566136 APCDD1Q8J025 514 aa10.09□□□□□ -0.79
UBFD1-205ENST00000566136 OR6S1Q8NH40 331 aa10.09□□□□□ -0.79
UBFD1-205ENST00000566136 CALML6Q8TD86 181 aa10.09□□□□□ -0.79
UBFD1-205ENST00000566136 NTAN1Q96AB6 310 aa10.09□□□□□ -0.79
UBFD1-205ENST00000566136 PTCD3Q96EY7 689 aaKnown RBP10.09□□□□□ -0.79
UBFD1-205ENST00000566136 SIK2Q9H0K1 926 aa10.09□□□□□ -0.79
UBFD1-205ENST00000566136 OR2AG1Q9H205 316 aa10.09□□□□□ -0.79
UBFD1-205ENST00000566136 SLC6A15Q9H2J7 730 aa10.09□□□□□ -0.79
UBFD1-205ENST00000566136 SAR1AQ9NR31 198 aa10.09□□□□□ -0.79
UBFD1-205ENST00000566136 OR12D3Q9UGF7 316 aa10.09□□□□□ -0.79
UBFD1-205ENST00000566136 DCDC2Q9UHG0 476 aa10.09□□□□□ -0.79
UBFD1-205ENST00000566136 PADI3Q9ULW8 664 aa10.09□□□□□ -0.79
UBFD1-205ENST00000566136 EPOPA6NHQ4 379 aa10.08□□□□□ -0.8
UBFD1-205ENST00000566136 ITM2AO43736 263 aa10.08□□□□□ -0.8
UBFD1-205ENST00000566136 GSRP00390 522 aa10.08□□□□□ -0.8
UBFD1-205ENST00000566136 CXCL10P02778 98 aa10.08□□□□□ -0.8
UBFD1-205ENST00000566136 HNF1AP20823 631 aa10.08□□□□□ -0.8
UBFD1-205ENST00000566136 GABRA5P31644 462 aa10.08□□□□□ -0.8
UBFD1-205ENST00000566136 GSTM5P46439 218 aa10.08□□□□□ -0.8
UBFD1-205ENST00000566136 HTR6P50406 440 aa10.08□□□□□ -0.8
UBFD1-205ENST00000566136 RASSF2P50749 326 aa10.08□□□□□ -0.8
UBFD1-205ENST00000566136 AQP5P55064 265 aa10.08□□□□□ -0.8
UBFD1-205ENST00000566136 BDH1Q02338 343 aa10.08□□□□□ -0.8
UBFD1-205ENST00000566136 RALGPS1Q5JS13 557 aa10.08□□□□□ -0.8
UBFD1-205ENST00000566136 CERCAMQ5T4B2 595 aa10.08□□□□□ -0.8
UBFD1-205ENST00000566136 C6orf183Q5T699 404 aa10.08□□□□□ -0.8
UBFD1-205ENST00000566136 RWDD4Q6NW29 188 aaKnown RBP10.08□□□□□ -0.8
UBFD1-205ENST00000566136 TIFABQ6ZNK6 161 aa10.08□□□□□ -0.8
UBFD1-205ENST00000566136 NANOGNBQ7Z5D8 188 aa10.08□□□□□ -0.8
UBFD1-205ENST00000566136 NOXA1Q86UR1 476 aa10.08□□□□□ -0.8
UBFD1-205ENST00000566136 SERINC5Q86VE9 423 aa10.08□□□□□ -0.8
UBFD1-205ENST00000566136 WFDC8Q8IUA0 241 aa10.08□□□□□ -0.8
UBFD1-205ENST00000566136 PHOSPHO2Q8TCD6 241 aa10.08□□□□□ -0.8
UBFD1-205ENST00000566136 CERS2Q96G23 380 aa10.08□□□□□ -0.8
UBFD1-205ENST00000566136 NSL1Q96IY1 281 aa10.08□□□□□ -0.8
UBFD1-205ENST00000566136 NDC1Q9BTX1 674 aa10.08□□□□□ -0.8
UBFD1-205ENST00000566136 CADM1Q9BY67 442 aaKnown RBP10.08□□□□□ -0.8
UBFD1-205ENST00000566136 GSX1Q9H4S2 264 aaPredicted RBP10.08□□□□□ -0.8
UBFD1-205ENST00000566136 GSTO2Q9H4Y5 243 aa10.08□□□□□ -0.8
UBFD1-205ENST00000566136 GPR35Q9HC97 309 aa10.08□□□□□ -0.8
UBFD1-205ENST00000566136 TXNDC16Q9P2K2 825 aa10.08□□□□□ -0.8
UBFD1-205ENST00000566136 SERGEFQ9UGK8 458 aa10.08□□□□□ -0.8
UBFD1-205ENST00000566136 VANGL2Q9ULK5 521 aa10.08□□□□□ -0.8
UBFD1-205ENST00000566136 SCML1Q9UN30 329 aa10.08□□□□□ -0.8
UBFD1-205ENST00000566136 PRRC2BQ5JSZ5 2229 aaKnown RBP10.08□□□□□ -0.8
UBFD1-205ENST00000566136 GOLGA8TH3BQL2 631 aa10.08□□□□□ -0.8
UBFD1-205ENST00000566136 SLC43A1O75387 559 aa10.08□□□□□ -0.8
UBFD1-205ENST00000566136 ZNF189O75820 626 aaPredicted RBP10.08□□□□□ -0.8
UBFD1-205ENST00000566136 TIAF1O95411 115 aa10.08□□□□□ -0.8
UBFD1-205ENST00000566136 AP2A1O95782 977 aa10.08□□□□□ -0.8
UBFD1-205ENST00000566136 JCHAINP01591 159 aa10.08□□□□□ -0.8
UBFD1-205ENST00000566136 KRT8P05787 483 aa10.08□□□□□ -0.8
UBFD1-205ENST00000566136 ZNF10P21506 573 aaPredicted RBP10.08□□□□□ -0.8
UBFD1-205ENST00000566136 TCEA1P23193 301 aaKnown RBP10.08□□□□□ -0.8
UBFD1-205ENST00000566136 PRPH2P23942 346 aa10.08□□□□□ -0.8
UBFD1-205ENST00000566136 DDX6P26196 483 aaKnown RBP eCLIP10.08□□□□□ -0.8
UBFD1-205ENST00000566136 PGFP49763 221 aa10.08□□□□□ -0.8
UBFD1-205ENST00000566136 RAP2BP61225 183 aa10.08□□□□□ -0.8
UBFD1-205ENST00000566136 MGAT3Q09327 533 aa10.08□□□□□ -0.8
UBFD1-205ENST00000566136 STX3Q13277 289 aa10.08□□□□□ -0.8
UBFD1-205ENST00000566136 UQCC3Q6UW78 93 aa10.08□□□□□ -0.8
UBFD1-205ENST00000566136 CRLF3Q8IUI8 442 aa10.08□□□□□ -0.8
UBFD1-205ENST00000566136 DQX1Q8TE96 717 aaKnown RBP10.08□□□□□ -0.8
UBFD1-205ENST00000566136 TECTBQ96PL2 329 aa10.08□□□□□ -0.8
UBFD1-205ENST00000566136 SSX3Q99909 188 aa10.08□□□□□ -0.8
UBFD1-205ENST00000566136 ROGDIQ9GZN7 287 aa10.08□□□□□ -0.8
UBFD1-205ENST00000566136 GEMIN7Q9H840 131 aaKnown RBP10.08□□□□□ -0.8
UBFD1-205ENST00000566136 GCM1Q9NP62 436 aa10.08□□□□□ -0.8
UBFD1-205ENST00000566136 LNPEPQ9UIQ6 1025 aa10.08□□□□□ -0.8
UBFD1-205ENST00000566136 NUDT5Q9UKK9 219 aa10.08□□□□□ -0.8
UBFD1-205ENST00000566136 PTPRSQ13332 1948 aa10.08□□□□□ -0.8
UBFD1-205ENST00000566136 XIRP2A4UGR9 3374 aa10.08□□□□□ -0.8
UBFD1-205ENST00000566136 ZNF264O43296 627 aa10.07□□□□□ -0.8
UBFD1-205ENST00000566136 MSI1O43347 362 aaKnown RBP10.07□□□□□ -0.8
UBFD1-205ENST00000566136 ENTPD5O75356 428 aa10.07□□□□□ -0.8
UBFD1-205ENST00000566136 SORBS2O94875 1100 aaKnown RBP10.07□□□□□ -0.8
UBFD1-205ENST00000566136 STAG3L2P0CL84 134 aa10.07□□□□□ -0.8
UBFD1-205ENST00000566136 UQCRC2P22695 453 aa10.07□□□□□ -0.8
UBFD1-205ENST00000566136 UCP1P25874 307 aa10.07□□□□□ -0.8
UBFD1-205ENST00000566136 APEX1P27695 318 aaKnown RBP10.07□□□□□ -0.8
UBFD1-205ENST00000566136 TRHRP34981 398 aaPredicted RBP10.07□□□□□ -0.8
UBFD1-205ENST00000566136 CXCR3P49682 368 aa10.07□□□□□ -0.8
UBFD1-205ENST00000566136 PAGE2BQ5JRK9 111 aa10.07□□□□□ -0.8
UBFD1-205ENST00000566136 CD300LGQ6UXG3 332 aa10.07□□□□□ -0.8
UBFD1-205ENST00000566136 CYS1Q717R9 158 aa10.07□□□□□ -0.8
UBFD1-205ENST00000566136 RHOUQ7L0Q8 258 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms