RNA–Protein interactions for RNA: ENST00000565815.1

LINC00561-201, long intergenic non-protein coding RNA 561, humanhuman

BASIC

Gene LINC00561, Length 2,738 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00561-201ENST00000565815 ZNF217O75362 1048 aa3.97□□□□□ -1.77
LINC00561-201ENST00000565815 APOEP02649 317 aa3.97□□□□□ -1.77
LINC00561-201ENST00000565815 SERPINE1P05121 402 aa3.97□□□□□ -1.77
LINC00561-201ENST00000565815 APOA4P06727 396 aa3.97□□□□□ -1.77
LINC00561-201ENST00000565815 BGNP21810 368 aa3.97□□□□□ -1.77
LINC00561-201ENST00000565815 SSTR1P30872 391 aa3.97□□□□□ -1.77
LINC00561-201ENST00000565815 FDFT1P37268 417 aa3.97□□□□□ -1.77
LINC00561-201ENST00000565815 PSMB10P40306 273 aa3.97□□□□□ -1.77
LINC00561-201ENST00000565815 MAGEA3P43357 314 aa3.97□□□□□ -1.77
LINC00561-201ENST00000565815 RFX2P48378 723 aa3.97□□□□□ -1.77
LINC00561-201ENST00000565815 DHPSP49366 369 aaPredicted RBP3.97□□□□□ -1.77
LINC00561-201ENST00000565815 TSPY1Q01534 308 aa3.97□□□□□ -1.77
LINC00561-201ENST00000565815 PPARDQ03181 441 aa3.97□□□□□ -1.77
LINC00561-201ENST00000565815 EMC2Q15006 297 aa3.97□□□□□ -1.77
LINC00561-201ENST00000565815 HERC3Q15034 1050 aa3.97□□□□□ -1.77
LINC00561-201ENST00000565815 SHBQ15464 509 aa3.97□□□□□ -1.77
LINC00561-201ENST00000565815 CCDC153Q494R4 210 aa3.97□□□□□ -1.77
LINC00561-201ENST00000565815 ANKRD20A4Q4UJ75 823 aa3.97□□□□□ -1.77
LINC00561-201ENST00000565815 IGSF11Q5DX21 431 aa3.97□□□□□ -1.77
LINC00561-201ENST00000565815 MFSD4BQ5TF39 518 aa3.97□□□□□ -1.77
LINC00561-201ENST00000565815 STEAP4Q687X5 459 aa3.97□□□□□ -1.77
LINC00561-201ENST00000565815 IZUMO2Q6UXV1 221 aa3.97□□□□□ -1.77
LINC00561-201ENST00000565815 ZDHHC17Q8IUH5 632 aa3.97□□□□□ -1.77
LINC00561-201ENST00000565815 MARVELD2Q8N4S9 558 aa3.97□□□□□ -1.77
LINC00561-201ENST00000565815 RBM15BQ8NDT2 890 aaKnown RBP3.97□□□□□ -1.77
LINC00561-201ENST00000565815 SPATA22Q8NHS9 363 aa3.97□□□□□ -1.77
LINC00561-201ENST00000565815 FAM81AQ8TBF8 368 aa3.97□□□□□ -1.77
LINC00561-201ENST00000565815 ORAI1Q96D31 301 aa3.97□□□□□ -1.77
LINC00561-201ENST00000565815 DGCR14Q96DF8 476 aaKnown RBP3.97□□□□□ -1.77
LINC00561-201ENST00000565815 FAM111AQ96PZ2 611 aa3.97□□□□□ -1.77
LINC00561-201ENST00000565815 ZNF670Q9BS34 389 aa3.97□□□□□ -1.77
LINC00561-201ENST00000565815 CNPY3Q9BT09 278 aa3.97□□□□□ -1.77
LINC00561-201ENST00000565815 MRPS26Q9BYN8 205 aaKnown RBP3.97□□□□□ -1.77
LINC00561-201ENST00000565815 NMUR2Q9GZQ4 415 aa3.97□□□□□ -1.77
LINC00561-201ENST00000565815 SDCBP2Q9H190 292 aa3.97□□□□□ -1.77
LINC00561-201ENST00000565815 APOBEC3GQ9HC16 384 aaKnown RBP3.97□□□□□ -1.77
LINC00561-201ENST00000565815 MRM3Q9HC36 420 aaKnown RBP3.97□□□□□ -1.77
LINC00561-201ENST00000565815 ACP6Q9NPH0 428 aa3.97□□□□□ -1.77
LINC00561-201ENST00000565815 POT1Q9NUX5 634 aa3.97□□□□□ -1.77
LINC00561-201ENST00000565815 MIOSQ9NXC5 875 aa3.97□□□□□ -1.77
LINC00561-201ENST00000565815 SLC17A7Q9P2U7 560 aa3.97□□□□□ -1.77
LINC00561-201ENST00000565815 UXTQ9UBK9 157 aaPredicted RBP3.97□□□□□ -1.77
LINC00561-201ENST00000565815 CHORDC1Q9UHD1 332 aaPredicted RBP3.97□□□□□ -1.77
LINC00561-201ENST00000565815 PLAGL1Q9UM63 463 aa3.97□□□□□ -1.77
LINC00561-201ENST00000565815 TTLL3Q9Y4R7 772 aa3.97□□□□□ -1.77
LINC00561-201ENST00000565815 PCDHGA1Q9Y5H4 931 aa3.97□□□□□ -1.77
LINC00561-201ENST00000565815 SNX9Q9Y5X1 595 aa3.97□□□□□ -1.77
LINC00561-201ENST00000565815 PLXND1Q9Y4D7 1925 aa3.97□□□□□ -1.77
LINC00561-201ENST00000565815 EME2A4GXA9 379 aaPredicted RBP3.97□□□□□ -1.77
LINC00561-201ENST00000565815 TRIM49D1C9J1S8 452 aa3.97□□□□□ -1.77
LINC00561-201ENST00000565815 AP3B1O00203 1094 aa3.97□□□□□ -1.77
LINC00561-201ENST00000565815 OGTO15294 1046 aa3.97□□□□□ -1.77
LINC00561-201ENST00000565815 BUD23O43709 281 aaKnown RBP3.97□□□□□ -1.77
LINC00561-201ENST00000565815 TMCC2O75069 709 aa3.97□□□□□ -1.77
LINC00561-201ENST00000565815 LRCH4O75427 683 aa3.97□□□□□ -1.77
LINC00561-201ENST00000565815 TOM1L1O75674 476 aa3.97□□□□□ -1.77
LINC00561-201ENST00000565815 SLC25A12O75746 678 aa3.97□□□□□ -1.77
LINC00561-201ENST00000565815 WISP2O76076 250 aa3.97□□□□□ -1.77
LINC00561-201ENST00000565815 KDM4BO94953 1096 aa3.97□□□□□ -1.77
LINC00561-201ENST00000565815 TRUB2O95900 331 aaKnown RBP3.97□□□□□ -1.77
LINC00561-201ENST00000565815 BCL10O95999 233 aa3.97□□□□□ -1.77
LINC00561-201ENST00000565815 TNNC2P02585 160 aa3.97□□□□□ -1.77
LINC00561-201ENST00000565815 ZSCAN5DPP0CG00 497 aa3.97□□□□□ -1.77
LINC00561-201ENST00000565815 CCDC166P0CW27 439 aa3.97□□□□□ -1.77
LINC00561-201ENST00000565815 SFTPCP11686 197 aa3.97□□□□□ -1.77
LINC00561-201ENST00000565815 TYMPP19971 482 aa3.97□□□□□ -1.77
LINC00561-201ENST00000565815 RPL3P39023 403 aaKnown RBP3.97□□□□□ -1.77
LINC00561-201ENST00000565815 P2RY2P41231 377 aa3.97□□□□□ -1.77
LINC00561-201ENST00000565815 ELK3P41970 407 aa3.97□□□□□ -1.77
LINC00561-201ENST00000565815 RPL5P46777 297 aaKnown RBP3.97□□□□□ -1.77
LINC00561-201ENST00000565815 SERPINB8P50452 374 aa3.97□□□□□ -1.77
LINC00561-201ENST00000565815 CSRP3P50461 194 aa3.97□□□□□ -1.77
LINC00561-201ENST00000565815 YWHAGP61981 247 aaKnown RBP eCLIP3.97□□□□□ -1.77
LINC00561-201ENST00000565815 BST1Q10588 318 aa3.97□□□□□ -1.77
LINC00561-201ENST00000565815 UGCGQ16739 394 aa3.97□□□□□ -1.77
LINC00561-201ENST00000565815 CNPY1Q3B7I2 92 aa3.97□□□□□ -1.77
LINC00561-201ENST00000565815 KBTBD12Q3ZCT8 623 aa3.97□□□□□ -1.77
LINC00561-201ENST00000565815 KLC3Q6P597 504 aa3.97□□□□□ -1.77
LINC00561-201ENST00000565815 TEX38Q6PEX7 206 aa3.97□□□□□ -1.77
LINC00561-201ENST00000565815 PRPF39Q86UA1 669 aaKnown RBP3.97□□□□□ -1.77
LINC00561-201ENST00000565815 TMPRSS12Q86WS5 348 aa3.97□□□□□ -1.77
LINC00561-201ENST00000565815 PSTKQ8IV42 348 aaKnown RBP3.97□□□□□ -1.77
LINC00561-201ENST00000565815 CHCHD4Q8N4Q1 142 aa3.97□□□□□ -1.77
LINC00561-201ENST00000565815 RNF149Q8NC42 400 aa3.97□□□□□ -1.77
LINC00561-201ENST00000565815 ICA1LQ8NDH6 482 aa3.97□□□□□ -1.77
LINC00561-201ENST00000565815 TRAF3IP1Q8TDR0 691 aaPredicted RBP3.97□□□□□ -1.77
LINC00561-201ENST00000565815 TMED6Q8WW62 240 aa3.97□□□□□ -1.77
LINC00561-201ENST00000565815 PRPF31Q8WWY3 499 aaKnown RBP3.97□□□□□ -1.77
LINC00561-201ENST00000565815 FAF2Q96CS3 445 aa3.97□□□□□ -1.77
LINC00561-201ENST00000565815 ANKRD36BP1Q96IX9 119 aa3.97□□□□□ -1.77
LINC00561-201ENST00000565815 SERAC1Q96JX3 654 aa3.97□□□□□ -1.77
LINC00561-201ENST00000565815 ZNF696Q9H7X3 374 aa3.97□□□□□ -1.77
LINC00561-201ENST00000565815 POPDC2Q9HBU9 364 aa3.97□□□□□ -1.77
LINC00561-201ENST00000565815 XPNPEP1Q9NQW7 623 aa3.97□□□□□ -1.77
LINC00561-201ENST00000565815 NSMCE4AQ9NXX6 385 aa3.97□□□□□ -1.77
LINC00561-201ENST00000565815 RCOR3Q9P2K3 495 aaPredicted RBP3.97□□□□□ -1.77
LINC00561-201ENST00000565815 POLG2Q9UHN1 485 aa3.97□□□□□ -1.77
LINC00561-201ENST00000565815 PILRBQ9UKJ0 227 aa3.97□□□□□ -1.77
LINC00561-201ENST00000565815 MMP17Q9ULZ9 603 aa3.97□□□□□ -1.77
LINC00561-201ENST00000565815 PSMD13Q9UNM6 376 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms