RNA–Protein interactions for RNA: ENST00000565452.1

VPS9D1-205, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 178 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-205ENST00000565452 C6orf52Q5T4I8 152 aa8.27□□□□□ -1.09
VPS9D1-205ENST00000565452 SCIMPQ6UWF3 145 aa8.27□□□□□ -1.09
VPS9D1-205ENST00000565452 ZNF611Q8N823 705 aa8.27□□□□□ -1.09
VPS9D1-205ENST00000565452 C9orf106Q8NAJ2 232 aa8.27□□□□□ -1.09
VPS9D1-205ENST00000565452 PAQR8Q8TEZ7 354 aa8.27□□□□□ -1.09
VPS9D1-205ENST00000565452 INTS12Q96CB8 462 aaKnown RBP8.27□□□□□ -1.09
VPS9D1-205ENST00000565452 MFSD3Q96ES6 412 aa8.27□□□□□ -1.09
VPS9D1-205ENST00000565452 WDYHV1Q96HA8 205 aa8.27□□□□□ -1.09
VPS9D1-205ENST00000565452 ZNF778Q96MU6 729 aa8.27□□□□□ -1.09
VPS9D1-205ENST00000565452 FAM111AQ96PZ2 611 aa8.27□□□□□ -1.09
VPS9D1-205ENST00000565452 HS3ST6Q96QI5 342 aa8.27□□□□□ -1.09
VPS9D1-205ENST00000565452 SLC39A3Q9BRY0 314 aa8.27□□□□□ -1.09
VPS9D1-205ENST00000565452 ADAP2Q9NPF8 381 aa8.27□□□□□ -1.09
VPS9D1-205ENST00000565452 ZDHHC18Q9NUE0 388 aa8.27□□□□□ -1.09
VPS9D1-205ENST00000565452 NSMCE4AQ9NXX6 385 aa8.27□□□□□ -1.09
VPS9D1-205ENST00000565452 DSCAMO60469 2012 aa8.27□□□□□ -1.09
VPS9D1-205ENST00000565452 SCN3AQ9NY46 2000 aa8.26□□□□□ -1.09
VPS9D1-205ENST00000565452 ZCWPW2A0A1B0GU75 182 aa8.26□□□□□ -1.09
VPS9D1-205ENST00000565452 C16orf97H3BN30 126 aa8.26□□□□□ -1.09
VPS9D1-205ENST00000565452 VAPBO95292 243 aa8.26□□□□□ -1.09
VPS9D1-205ENST00000565452 B3GALT4O96024 378 aa8.26□□□□□ -1.09
VPS9D1-205ENST00000565452 SRD5A1P18405 259 aa8.26□□□□□ -1.09
VPS9D1-205ENST00000565452 TNNI3P19429 210 aa8.26□□□□□ -1.09
VPS9D1-205ENST00000565452 CFPP27918 469 aa8.26□□□□□ -1.09
VPS9D1-205ENST00000565452 CPOXP36551 454 aa8.26□□□□□ -1.09
VPS9D1-205ENST00000565452 CD79BP40259 229 aa8.26□□□□□ -1.09
VPS9D1-205ENST00000565452 ELK3P41970 407 aa8.26□□□□□ -1.09
VPS9D1-205ENST00000565452 MAGEA4P43358 317 aa8.26□□□□□ -1.09
VPS9D1-205ENST00000565452 RPS4XP62701 263 aaKnown RBP8.26□□□□□ -1.09
VPS9D1-205ENST00000565452 MRPS25P82663 173 aaKnown RBP8.26□□□□□ -1.09
VPS9D1-205ENST00000565452 SRSF2Q01130 221 aaKnown RBP8.26□□□□□ -1.09
VPS9D1-205ENST00000565452 ZNF791Q3KP31 576 aaPredicted RBP8.26□□□□□ -1.09
VPS9D1-205ENST00000565452 MSS51Q4VC12 460 aa8.26□□□□□ -1.09
VPS9D1-205ENST00000565452 ACSBG2Q5FVE4 666 aa8.26□□□□□ -1.09
VPS9D1-205ENST00000565452 NHSL2Q5HYW2 709 aa8.26□□□□□ -1.09
VPS9D1-205ENST00000565452 STEAP4Q687X5 459 aa8.26□□□□□ -1.09
VPS9D1-205ENST00000565452 NEPROQ6NW34 567 aa8.26□□□□□ -1.09
VPS9D1-205ENST00000565452 ZDHHC24Q6UX98 284 aa8.26□□□□□ -1.09
VPS9D1-205ENST00000565452 GALNT7Q86SF2 657 aa8.26□□□□□ -1.09
VPS9D1-205ENST00000565452 DND1Q8IYX4 353 aaKnown RBP8.26□□□□□ -1.09
VPS9D1-205ENST00000565452 ZBED8Q8IZ13 594 aa8.26□□□□□ -1.09
VPS9D1-205ENST00000565452 SLC15A4Q8N697 577 aa8.26□□□□□ -1.09
VPS9D1-205ENST00000565452 SLC22A8Q8TCC7 542 aa8.26□□□□□ -1.09
VPS9D1-205ENST00000565452 UTP15Q8TED0 518 aaKnown RBP8.26□□□□□ -1.09
VPS9D1-205ENST00000565452 SREK1Q8WXA9 508 aaKnown RBP8.26□□□□□ -1.09
VPS9D1-205ENST00000565452 ASB11Q8WXH4 323 aa8.26□□□□□ -1.09
VPS9D1-205ENST00000565452 IFT81Q8WYA0 676 aa8.26□□□□□ -1.09
VPS9D1-205ENST00000565452 WNT2BQ93097 391 aa8.26□□□□□ -1.09
VPS9D1-205ENST00000565452 ABTB1Q969K4 478 aaPredicted RBP8.26□□□□□ -1.09
VPS9D1-205ENST00000565452 ZNF669Q96BR6 464 aaPredicted RBP8.26□□□□□ -1.09
VPS9D1-205ENST00000565452 FMO2Q99518 471 aa8.26□□□□□ -1.09
VPS9D1-205ENST00000565452 FAM167BQ9BTA0 163 aa8.26□□□□□ -1.09
VPS9D1-205ENST00000565452 PRTFDC1Q9NRG1 225 aa8.26□□□□□ -1.09
VPS9D1-205ENST00000565452 INTS10Q9NVR2 710 aaKnown RBP8.26□□□□□ -1.09
VPS9D1-205ENST00000565452 ELOVL5Q9NYP7 299 aa8.26□□□□□ -1.09
VPS9D1-205ENST00000565452 MARCH4Q9P2E8 410 aaPredicted RBP8.26□□□□□ -1.09
VPS9D1-205ENST00000565452 PACSIN3Q9UKS6 424 aa8.26□□□□□ -1.09
VPS9D1-205ENST00000565452 LAMP3Q9UQV4 416 aa8.26□□□□□ -1.09
VPS9D1-205ENST00000565452 COMMD10Q9Y6G5 202 aa8.26□□□□□ -1.09
VPS9D1-205ENST00000565452 TGP01266 2768 aa8.26□□□□□ -1.09
VPS9D1-205ENST00000565452 LRRC3CA6NJW4 275 aa8.25□□□□□ -1.09
VPS9D1-205ENST00000565452 GFYI3L273 518 aa8.25□□□□□ -1.09
VPS9D1-205ENST00000565452 ESR1P03372 595 aa8.25□□□□□ -1.09
VPS9D1-205ENST00000565452 HPNP05981 417 aa8.25□□□□□ -1.09
VPS9D1-205ENST00000565452 RHOXF2BP0C7M4 288 aa8.25□□□□□ -1.09
VPS9D1-205ENST00000565452 CCND1P24385 295 aa8.25□□□□□ -1.09
VPS9D1-205ENST00000565452 PPP2R1BP30154 601 aa8.25□□□□□ -1.09
VPS9D1-205ENST00000565452 PHBP35232 272 aa8.25□□□□□ -1.09
VPS9D1-205ENST00000565452 GCKP35557 465 aa8.25□□□□□ -1.09
VPS9D1-205ENST00000565452 UGT2B10P36537 528 aa8.25□□□□□ -1.09
VPS9D1-205ENST00000565452 HNF4AP41235 474 aa8.25□□□□□ -1.09
VPS9D1-205ENST00000565452 SKIV2L2P42285 1042 aaKnown RBP8.25□□□□□ -1.09
VPS9D1-205ENST00000565452 CCR8P51685 355 aa8.25□□□□□ -1.09
VPS9D1-205ENST00000565452 RAB8AP61006 207 aa8.25□□□□□ -1.09
VPS9D1-205ENST00000565452 ASPHQ12797 758 aa8.25□□□□□ -1.09
VPS9D1-205ENST00000565452 CRYMQ14894 314 aa8.25□□□□□ -1.09
VPS9D1-205ENST00000565452 TOMM20Q15388 145 aa8.25□□□□□ -1.09
VPS9D1-205ENST00000565452 PDLIM3Q53GG5 364 aaPredicted RBP8.25□□□□□ -1.09
VPS9D1-205ENST00000565452 PRAMEF20Q5VT98 475 aa8.25□□□□□ -1.09
VPS9D1-205ENST00000565452 ZNF704Q6ZNC4 412 aaPredicted RBP8.25□□□□□ -1.09
VPS9D1-205ENST00000565452 C3orf62Q6ZUJ4 267 aa8.25□□□□□ -1.09
VPS9D1-205ENST00000565452 STRA8Q7Z7C7 330 aa8.25□□□□□ -1.09
VPS9D1-205ENST00000565452 CNTN4Q8IWV2 1026 aa8.25□□□□□ -1.09
VPS9D1-205ENST00000565452 ZNF595Q8IYB9 648 aa8.25□□□□□ -1.09
VPS9D1-205ENST00000565452 CA13Q8N1Q1 262 aa8.25□□□□□ -1.09
VPS9D1-205ENST00000565452 PPM1NQ8N819 430 aa8.25□□□□□ -1.09
VPS9D1-205ENST00000565452 FAM13CQ8NE31 585 aa8.25□□□□□ -1.09
VPS9D1-205ENST00000565452 FBXO36Q8NEA4 188 aa8.25□□□□□ -1.09
VPS9D1-205ENST00000565452 OR14A16Q8NHC5 309 aa8.25□□□□□ -1.09
VPS9D1-205ENST00000565452 NT5CQ8TCD5 201 aa8.25□□□□□ -1.09
VPS9D1-205ENST00000565452 SLC44A1Q8WWI5 657 aa8.25□□□□□ -1.09
VPS9D1-205ENST00000565452 CDKL2Q92772 493 aa8.25□□□□□ -1.09
VPS9D1-205ENST00000565452 GTPBP3Q969Y2 492 aaKnown RBP8.25□□□□□ -1.09
VPS9D1-205ENST00000565452 FAM136AQ96C01 138 aa8.25□□□□□ -1.09
VPS9D1-205ENST00000565452 REPS1Q96D71 796 aa8.25□□□□□ -1.09
VPS9D1-205ENST00000565452 ZMYND19Q96E35 227 aaPredicted RBP8.25□□□□□ -1.09
VPS9D1-205ENST00000565452 ZC3HAV1LQ96H79 300 aaKnown RBP8.25□□□□□ -1.09
VPS9D1-205ENST00000565452 MARK4Q96L34 752 aa8.25□□□□□ -1.09
VPS9D1-205ENST00000565452 BIRC8Q96P09 236 aa8.25□□□□□ -1.09
VPS9D1-205ENST00000565452 RHOXF2Q9BQY4 288 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms