RNA–Protein interactions for RNA: ENST00000565379.1

NME3-208, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 911 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-208ENST00000565379 TMEM205Q6UW68 189 aa24.32■■□□□ 1.48
NME3-208ENST00000565379 SHISA6Q6ZSJ9 500 aa24.32■■□□□ 1.48
NME3-208ENST00000565379 SAMD14Q8IZD0 417 aaPredicted RBP24.32■■□□□ 1.48
NME3-208ENST00000565379 THAP4Q8WY91 577 aa24.32■■□□□ 1.48
NME3-208ENST00000565379 NPHS2Q9NP85 383 aa24.32■■□□□ 1.48
NME3-208ENST00000565379 TCF7L2Q9NQB0 619 aa24.32■■□□□ 1.48
NME3-208ENST00000565379 GIMAP2Q9UG22 337 aa24.32■■□□□ 1.48
NME3-208ENST00000565379 IGKV3D-11A0A0A0MRZ8 115 aa24.31■■□□□ 1.48
NME3-208ENST00000565379 GOLGA8QA0A0J9YX86 632 aa24.31■■□□□ 1.48
NME3-208ENST00000565379 GOLGA8OA6NCC3 632 aa24.31■■□□□ 1.48
NME3-208ENST00000565379 GOLGA8NF8WBI6 632 aa24.31■■□□□ 1.48
NME3-208ENST00000565379 MKRN2OSH3BPM6 223 aa24.31■■□□□ 1.48
NME3-208ENST00000565379 DDCP20711 480 aa24.31■■□□□ 1.48
NME3-208ENST00000565379 LSP1P33241 339 aa24.31■■□□□ 1.48
NME3-208ENST00000565379 IDH3AP50213 366 aa24.31■■□□□ 1.48
NME3-208ENST00000565379 STX4Q12846 297 aa24.31■■□□□ 1.48
NME3-208ENST00000565379 NSDHLQ15738 373 aa24.31■■□□□ 1.48
NME3-208ENST00000565379 NXNQ6DKJ4 435 aa24.31■■□□□ 1.48
NME3-208ENST00000565379 FAM71E1Q6IPT2 247 aa24.31■■□□□ 1.48
NME3-208ENST00000565379 SLC48A1Q6P1K1 146 aa24.31■■□□□ 1.48
NME3-208ENST00000565379 APLFQ8IW19 511 aaPredicted RBP24.31■■□□□ 1.48
NME3-208ENST00000565379 LIX1Q8N485 282 aa24.31■■□□□ 1.48
NME3-208ENST00000565379 ZNF764Q96H86 408 aaPredicted RBP24.31■■□□□ 1.48
NME3-208ENST00000565379 C1orf50Q9BV19 199 aa24.31■■□□□ 1.48
NME3-208ENST00000565379 NSRP1Q9H0G5 558 aaKnown RBP24.31■■□□□ 1.48
NME3-208ENST00000565379 DOPEY2Q9Y3R5 2298 aa24.3■■□□□ 1.48
NME3-208ENST00000565379 LOC102723996A0A087X1L8 192 aa24.3■■□□□ 1.48
NME3-208ENST00000565379 GYS2P54840 703 aa24.3■■□□□ 1.48
NME3-208ENST00000565379 GNGT1P63211 74 aa24.3■■□□□ 1.48
NME3-208ENST00000565379 BTG2P78543 158 aa24.3■■□□□ 1.48
NME3-208ENST00000565379 C2orf80Q0P641 193 aa24.3■■□□□ 1.48
NME3-208ENST00000565379 TCTN3Q6NUS6 607 aa24.3■■□□□ 1.48
NME3-208ENST00000565379 ASB18Q6ZVZ8 466 aa24.3■■□□□ 1.48
NME3-208ENST00000565379 R3HCC1LQ7Z5L2 792 aaKnown RBP24.3■■□□□ 1.48
NME3-208ENST00000565379 SHISA5Q8N114 240 aa24.3■■□□□ 1.48
NME3-208ENST00000565379 TMEM52Q8NDY8 209 aa24.3■■□□□ 1.48
NME3-208ENST00000565379 DNAJB14Q8TBM8 379 aa24.3■■□□□ 1.48
NME3-208ENST00000565379 MTERF3Q96E29 417 aa24.3■■□□□ 1.48
NME3-208ENST00000565379 PELOQ9BRX2 385 aaKnown RBP24.3■■□□□ 1.48
NME3-208ENST00000565379 MIEF1Q9NQG6 463 aa24.3■■□□□ 1.48
NME3-208ENST00000565379 A0A1W2PQ72 361 aa24.29■■□□□ 1.48
NME3-208ENST00000565379 TCRBV16S1A1N1A0A5B0 115 aa24.29■■□□□ 1.48
NME3-208ENST00000565379 PEX12O00623 359 aa24.29■■□□□ 1.48
NME3-208ENST00000565379 GPR75O95800 540 aa24.29■■□□□ 1.48
NME3-208ENST00000565379 TACR1P25103 407 aa24.29■■□□□ 1.48
NME3-208ENST00000565379 OTX2P32243 289 aa24.29■■□□□ 1.48
NME3-208ENST00000565379 CCL11P51671 97 aa24.29■■□□□ 1.48
NME3-208ENST00000565379 HNRNPFP52597 415 aaKnown RBP24.29■■□□□ 1.48
NME3-208ENST00000565379 IGLV3-21P80748 117 aaPredicted RBP24.29■■□□□ 1.48
NME3-208ENST00000565379 SRSF1Q07955 248 aaKnown RBP eCLIP24.29■■□□□ 1.48
NME3-208ENST00000565379 ACTN3Q08043 901 aaPredicted RBP24.29■■□□□ 1.48
NME3-208ENST00000565379 GSTA3Q16772 222 aa24.29■■□□□ 1.48
NME3-208ENST00000565379 OR4K14Q8NGD5 310 aa24.29■■□□□ 1.48
NME3-208ENST00000565379 CDC26Q8NHZ8 85 aa24.29■■□□□ 1.48
NME3-208ENST00000565379 TSSK3Q96PN8 268 aa24.29■■□□□ 1.48
NME3-208ENST00000565379 ING2Q9H160 280 aa24.29■■□□□ 1.48
NME3-208ENST00000565379 TAS2R7Q9NYW3 318 aa24.29■■□□□ 1.48
NME3-208ENST00000565379 KLHL14Q9P2G3 628 aa24.29■■□□□ 1.48
NME3-208ENST00000565379 HS3ST3B1Q9Y662 390 aa24.29■■□□□ 1.48
NME3-208ENST00000565379 NUP210LQ5VU65 1888 aa24.28■■□□□ 1.48
NME3-208ENST00000565379 GMNCA6NCL1 334 aa24.28■■□□□ 1.48
NME3-208ENST00000565379 MASP2O00187 686 aa24.28■■□□□ 1.48
NME3-208ENST00000565379 TBX19O60806 448 aa24.28■■□□□ 1.48
NME3-208ENST00000565379 G6PDP11413 515 aa24.28■■□□□ 1.48
NME3-208ENST00000565379 IDO1P14902 403 aa24.28■■□□□ 1.48
NME3-208ENST00000565379 PRPS1L1P21108 318 aa24.28■■□□□ 1.48
NME3-208ENST00000565379 MAOAP21397 527 aa24.28■■□□□ 1.48
NME3-208ENST00000565379 PIK3R1P27986 724 aa24.28■■□□□ 1.48
NME3-208ENST00000565379 ALDH9A1P49189 494 aa24.28■■□□□ 1.48
NME3-208ENST00000565379 C21orf58P58505 322 aa24.28■■□□□ 1.48
NME3-208ENST00000565379 FOXK1P85037 733 aa24.28■■□□□ 1.48
NME3-208ENST00000565379 FOLH1Q04609 750 aa24.28■■□□□ 1.48
NME3-208ENST00000565379 ATP1A4Q13733 1029 aa24.28■■□□□ 1.48
NME3-208ENST00000565379 LSM12Q3MHD2 195 aaKnown RBP24.28■■□□□ 1.48
NME3-208ENST00000565379 PPP1R32Q7Z5V6 425 aa24.28■■□□□ 1.48
NME3-208ENST00000565379 CLNKQ7Z7G1 428 aa24.28■■□□□ 1.48
NME3-208ENST00000565379 ANKRD9Q96BM1 317 aaPredicted RBP24.28■■□□□ 1.48
NME3-208ENST00000565379 OR52B2Q96RD2 323 aa24.28■■□□□ 1.48
NME3-208ENST00000565379 REEP4Q9H6H4 257 aa24.28■■□□□ 1.48
NME3-208ENST00000565379 NECTIN3Q9NQS3 549 aa24.28■■□□□ 1.48
NME3-208ENST00000565379 GIMAP4Q9NUV9 329 aa24.28■■□□□ 1.48
NME3-208ENST00000565379 DCTN4Q9UJW0 460 aa24.28■■□□□ 1.48
NME3-208ENST00000565379 CES1P1Q9UKY3 287 aa24.28■■□□□ 1.48
NME3-208ENST00000565379 ZNF780BQ9Y6R6 833 aa24.28■■□□□ 1.48
NME3-208ENST00000565379 PRRC2CQ9Y520 2896 aaKnown RBP24.27■■□□□ 1.48
NME3-208ENST00000565379 PGRMC2O15173 223 aa24.27■■□□□ 1.48
NME3-208ENST00000565379 UBDO15205 165 aa24.27■■□□□ 1.48
NME3-208ENST00000565379 HPCAL1P37235 193 aa24.27■■□□□ 1.48
NME3-208ENST00000565379 CLDN8P56748 225 aa24.27■■□□□ 1.48
NME3-208ENST00000565379 CPEB2Q7Z5Q1 589 aaKnown RBP24.27■■□□□ 1.48
NME3-208ENST00000565379 ANKRD37Q7Z713 158 aa24.27■■□□□ 1.48
NME3-208ENST00000565379 NATD1Q8N6N6 113 aa24.27■■□□□ 1.48
NME3-208ENST00000565379 EGLN2Q96KS0 407 aa24.27■■□□□ 1.48
NME3-208ENST00000565379 PRPF18Q99633 342 aaKnown RBP24.27■■□□□ 1.48
NME3-208ENST00000565379 EBF4Q9BQW3 602 aa24.27■■□□□ 1.48
NME3-208ENST00000565379 ALOXE3Q9BYJ1 711 aa24.27■■□□□ 1.48
NME3-208ENST00000565379 AIG1Q9NVV5 245 aa24.27■■□□□ 1.48
NME3-208ENST00000565379 HEY2Q9UBP5 337 aa24.27■■□□□ 1.48
NME3-208ENST00000565379 BAIAP2L1Q9UHR4 511 aa24.27■■□□□ 1.48
NME3-208ENST00000565379 UTS2RQ9UKP6 389 aa24.27■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms