RNA–Protein interactions for RNA: ENST00000564899.1

SF3B3-205, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-205ENST00000564899 DSELQ8IZU8 1212 aa10.44□□□□□ -0.74
SF3B3-205ENST00000564899 DPP10Q8N608 796 aa10.44□□□□□ -0.74
SF3B3-205ENST00000564899 NATD1Q8N6N6 113 aa10.44□□□□□ -0.74
SF3B3-205ENST00000564899 ZNF248Q8NDW4 579 aa10.44□□□□□ -0.74
SF3B3-205ENST00000564899 VPS37AQ8NEZ2 397 aa10.44□□□□□ -0.74
SF3B3-205ENST00000564899 GTF2H4Q92759 462 aa10.44□□□□□ -0.74
SF3B3-205ENST00000564899 CIDECQ96AQ7 238 aaPredicted RBP10.44□□□□□ -0.74
SF3B3-205ENST00000564899 ROPN1LQ96C74 230 aa10.44□□□□□ -0.74
SF3B3-205ENST00000564899 KLHL29Q96CT2 875 aa10.44□□□□□ -0.74
SF3B3-205ENST00000564899 RNF31Q96EP0 1072 aa10.44□□□□□ -0.74
SF3B3-205ENST00000564899 LIN37Q96GY3 246 aaPredicted RBP10.44□□□□□ -0.74
SF3B3-205ENST00000564899 ITCHQ96J02 903 aa10.44□□□□□ -0.74
SF3B3-205ENST00000564899 BTBD10Q9BSF8 475 aa10.44□□□□□ -0.74
SF3B3-205ENST00000564899 RBCK1Q9BYM8 510 aa10.44□□□□□ -0.74
SF3B3-205ENST00000564899 C1orf21Q9H246 121 aa10.44□□□□□ -0.74
SF3B3-205ENST00000564899 LRMDAQ9H2I8 198 aa10.44□□□□□ -0.74
SF3B3-205ENST00000564899 RPF2Q9H7B2 306 aaKnown RBP10.44□□□□□ -0.74
SF3B3-205ENST00000564899 IL1RL2Q9HB29 575 aa10.44□□□□□ -0.74
SF3B3-205ENST00000564899 ASCL3Q9NQ33 180 aa10.44□□□□□ -0.74
SF3B3-205ENST00000564899 PRDM9Q9NQV7 894 aa10.44□□□□□ -0.74
SF3B3-205ENST00000564899 FBXO8Q9NRD0 319 aa10.44□□□□□ -0.74
SF3B3-205ENST00000564899 GIMAP4Q9NUV9 329 aa10.44□□□□□ -0.74
SF3B3-205ENST00000564899 GID8Q9NWU2 228 aa10.44□□□□□ -0.74
SF3B3-205ENST00000564899 NDE1Q9NXR1 346 aa10.44□□□□□ -0.74
SF3B3-205ENST00000564899 SLC39A1Q9NY26 324 aa10.44□□□□□ -0.74
SF3B3-205ENST00000564899 TAS2R1Q9NYW7 299 aa10.44□□□□□ -0.74
SF3B3-205ENST00000564899 MAP10Q9P2G4 905 aa10.44□□□□□ -0.74
SF3B3-205ENST00000564899 ENTPD4Q9Y227 616 aa10.44□□□□□ -0.74
SF3B3-205ENST00000564899 TMEM184BQ9Y519 407 aaPredicted RBP10.44□□□□□ -0.74
SF3B3-205ENST00000564899 PCDHB3Q9Y5E6 796 aa10.44□□□□□ -0.74
SF3B3-205ENST00000564899 PRSS51A0A1B0GVH4 220 aa10.43□□□□□ -0.74
SF3B3-205ENST00000564899 WASHC1A8K0Z3 465 aa10.43□□□□□ -0.74
SF3B3-205ENST00000564899 RNASET2O00584 256 aaKnown RBP10.43□□□□□ -0.74
SF3B3-205ENST00000564899 CYR61O00622 381 aa10.43□□□□□ -0.74
SF3B3-205ENST00000564899 RFXANKO14593 260 aa10.43□□□□□ -0.74
SF3B3-205ENST00000564899 PGRMC2O15173 223 aa10.43□□□□□ -0.74
SF3B3-205ENST00000564899 KLK10O43240 276 aa10.43□□□□□ -0.74
SF3B3-205ENST00000564899 SCN2BO60939 215 aa10.43□□□□□ -0.74
SF3B3-205ENST00000564899 CPNE3O75131 537 aaKnown RBP10.43□□□□□ -0.74
SF3B3-205ENST00000564899 ERAL1O75616 437 aaKnown RBP10.43□□□□□ -0.74
SF3B3-205ENST00000564899 KCNH1O95259 989 aa10.43□□□□□ -0.74
SF3B3-205ENST00000564899 CPSF4O95639 269 aaKnown RBP10.43□□□□□ -0.74
SF3B3-205ENST00000564899 NTSP30990 170 aa10.43□□□□□ -0.74
SF3B3-205ENST00000564899 CPOXP36551 454 aa10.43□□□□□ -0.74
SF3B3-205ENST00000564899 PCBP4P57723 403 aaKnown RBP10.43□□□□□ -0.74
SF3B3-205ENST00000564899 TMPRSS3P57727 454 aa10.43□□□□□ -0.74
SF3B3-205ENST00000564899 GABREP78334 506 aa10.43□□□□□ -0.74
SF3B3-205ENST00000564899 RHDQ02161 417 aa10.43□□□□□ -0.74
SF3B3-205ENST00000564899 LRRC74AQ0VAA2 488 aa10.43□□□□□ -0.74
SF3B3-205ENST00000564899 EIF3IQ13347 325 aaKnown RBP10.43□□□□□ -0.74
SF3B3-205ENST00000564899 DSG2Q14126 1118 aa10.43□□□□□ -0.74
SF3B3-205ENST00000564899 MPEG1Q2M385 716 aa10.43□□□□□ -0.74
SF3B3-205ENST00000564899 FAM180BQ6P0A1 224 aa10.43□□□□□ -0.74
SF3B3-205ENST00000564899 CLECL1Q8IZS7 167 aa10.43□□□□□ -0.74
SF3B3-205ENST00000564899 SHISA5Q8N114 240 aa10.43□□□□□ -0.74
SF3B3-205ENST00000564899 KIF2BQ8N4N8 673 aa10.43□□□□□ -0.74
SF3B3-205ENST00000564899 OR4A15Q8NGL6 344 aa10.43□□□□□ -0.74
SF3B3-205ENST00000564899 OR51Q1Q8NH59 317 aa10.43□□□□□ -0.74
SF3B3-205ENST00000564899 ZDHHC19Q8WVZ1 309 aaPredicted RBP10.43□□□□□ -0.74
SF3B3-205ENST00000564899 MIEF2Q96C03 454 aa10.43□□□□□ -0.74
SF3B3-205ENST00000564899 LRRC58Q96CX6 371 aa10.43□□□□□ -0.74
SF3B3-205ENST00000564899 CLIP3Q96DZ5 547 aa10.43□□□□□ -0.74
SF3B3-205ENST00000564899 PEX11GQ96HA9 241 aa10.43□□□□□ -0.74
SF3B3-205ENST00000564899 CCDC115Q96NT0 180 aa10.43□□□□□ -0.74
SF3B3-205ENST00000564899 GBP5Q96PP8 586 aa10.43□□□□□ -0.74
SF3B3-205ENST00000564899 INPP5KQ9BT40 448 aa10.43□□□□□ -0.74
SF3B3-205ENST00000564899 YIPF2Q9BWQ6 316 aa10.43□□□□□ -0.74
SF3B3-205ENST00000564899 ZNF304Q9HCX3 659 aa10.43□□□□□ -0.74
SF3B3-205ENST00000564899 SERHLQ9NQF3 203 aa10.43□□□□□ -0.74
SF3B3-205ENST00000564899 SLC35C2Q9NQQ7 365 aa10.43□□□□□ -0.74
SF3B3-205ENST00000564899 TAS2R7Q9NYW3 318 aa10.43□□□□□ -0.74
SF3B3-205ENST00000564899 BTNL2Q9UIR0 455 aa10.43□□□□□ -0.74
SF3B3-205ENST00000564899 CROTQ9UKG9 612 aa10.43□□□□□ -0.74
SF3B3-205ENST00000564899 CES1P1Q9UKY3 287 aa10.43□□□□□ -0.74
SF3B3-205ENST00000564899 PSME2Q9UL46 239 aa10.43□□□□□ -0.74
SF3B3-205ENST00000564899 MRPS33Q9Y291 106 aaKnown RBP10.43□□□□□ -0.74
SF3B3-205ENST00000564899 MAN2B2Q9Y2E5 1009 aa10.43□□□□□ -0.74
SF3B3-205ENST00000564899 SPTAN1Q13813 2472 aaKnown RBP10.43□□□□□ -0.74
SF3B3-205ENST00000564899 NBASA2RRP1 2371 aa10.43□□□□□ -0.74
SF3B3-205ENST00000564899 AHCTF1Q8WYP5 2266 aa10.42□□□□□ -0.74
SF3B3-205ENST00000564899 CCDC187A0A096LP49 1063 aa10.42□□□□□ -0.74
SF3B3-205ENST00000564899 A0A096LPI6 279 aa10.42□□□□□ -0.74
SF3B3-205ENST00000564899 A0A1W2PRB8 838 aa10.42□□□□□ -0.74
SF3B3-205ENST00000564899 BLACEA4D250 179 aa10.42□□□□□ -0.74
SF3B3-205ENST00000564899 FAM227AF5H4B4 570 aa10.42□□□□□ -0.74
SF3B3-205ENST00000564899 FXYD1O00168 92 aa10.42□□□□□ -0.74
SF3B3-205ENST00000564899 ERN1O75460 977 aaKnown RBP10.42□□□□□ -0.74
SF3B3-205ENST00000564899 ANP32DO95626 131 aa10.42□□□□□ -0.74
SF3B3-205ENST00000564899 C6orf47O95873 294 aa10.42□□□□□ -0.74
SF3B3-205ENST00000564899 NPPAP01160 153 aa10.42□□□□□ -0.74
SF3B3-205ENST00000564899 NTRK1P04629 796 aa10.42□□□□□ -0.74
SF3B3-205ENST00000564899 FHP07954 510 aa10.42□□□□□ -0.74
SF3B3-205ENST00000564899 JMJD7P0C870 316 aa10.42□□□□□ -0.74
SF3B3-205ENST00000564899 ITIH1P19827 911 aa10.42□□□□□ -0.74
SF3B3-205ENST00000564899 ETV5P41161 510 aa10.42□□□□□ -0.74
SF3B3-205ENST00000564899 CDKN2CP42773 168 aa10.42□□□□□ -0.74
SF3B3-205ENST00000564899 XCR1P46094 333 aa10.42□□□□□ -0.74
SF3B3-205ENST00000564899 TRPC1P48995 793 aa10.42□□□□□ -0.74
SF3B3-205ENST00000564899 HNRNPFP52597 415 aaKnown RBP10.42□□□□□ -0.74
SF3B3-205ENST00000564899 MAPK10P53779 464 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms