RNA–Protein interactions for RNA: ENST00000564664.5

GTF3C1-204, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-204ENST00000564664 A0A0A6YYD5 115 aa11.26□□□□□ -0.61
GTF3C1-204ENST00000564664 HMX2A2RU54 273 aa11.26□□□□□ -0.61
GTF3C1-204ENST00000564664 PINLYPA6NC86 204 aa11.26□□□□□ -0.61
GTF3C1-204ENST00000564664 CAPN14A8MX76 684 aa11.26□□□□□ -0.61
GTF3C1-204ENST00000564664 FAM47E-STBD1D6RA91 191 aa11.26□□□□□ -0.61
GTF3C1-204ENST00000564664 C19orf84I3L1E1 186 aa11.26□□□□□ -0.61
GTF3C1-204ENST00000564664 SAP18O00422 153 aaKnown RBP11.26□□□□□ -0.61
GTF3C1-204ENST00000564664 AQP7O14520 342 aa11.26□□□□□ -0.61
GTF3C1-204ENST00000564664 SEMA3DO95025 777 aa11.26□□□□□ -0.61
GTF3C1-204ENST00000564664 CLDN9O95484 217 aa11.26□□□□□ -0.61
GTF3C1-204ENST00000564664 FAM58BPP0C7Q3 252 aa11.26□□□□□ -0.61
GTF3C1-204ENST00000564664 SLC35E2P0CK97 266 aa11.26□□□□□ -0.61
GTF3C1-204ENST00000564664 COL6A2P12110 1019 aa11.26□□□□□ -0.61
GTF3C1-204ENST00000564664 SERPINB9P50453 376 aa11.26□□□□□ -0.61
GTF3C1-204ENST00000564664 RPS13P62277 151 aaKnown RBP11.26□□□□□ -0.61
GTF3C1-204ENST00000564664 FOLH1Q04609 750 aa11.26□□□□□ -0.61
GTF3C1-204ENST00000564664 FOXO1Q12778 655 aa11.26□□□□□ -0.61
GTF3C1-204ENST00000564664 DDX39BQ13838 428 aaKnown RBP11.26□□□□□ -0.61
GTF3C1-204ENST00000564664 CDSNQ15517 529 aa11.26□□□□□ -0.61
GTF3C1-204ENST00000564664 C8orf74Q6P047 294 aa11.26□□□□□ -0.61
GTF3C1-204ENST00000564664 C3P1Q6ZMU1 363 aa11.26□□□□□ -0.61
GTF3C1-204ENST00000564664 FAM47EQ6ZV65 393 aa11.26□□□□□ -0.61
GTF3C1-204ENST00000564664 TRILQ7L0X0 811 aa11.26□□□□□ -0.61
GTF3C1-204ENST00000564664 TAOK1Q7L7X3 1001 aa11.26□□□□□ -0.61
GTF3C1-204ENST00000564664 SLC29A4Q7RTT9 530 aa11.26□□□□□ -0.61
GTF3C1-204ENST00000564664 MYLK4Q86YV6 388 aaPredicted RBP11.26□□□□□ -0.61
GTF3C1-204ENST00000564664 OR4N5Q8IXE1 308 aa11.26□□□□□ -0.61
GTF3C1-204ENST00000564664 PAQR8Q8TEZ7 354 aa11.26□□□□□ -0.61
GTF3C1-204ENST00000564664 RIT1Q92963 219 aa11.26□□□□□ -0.61
GTF3C1-204ENST00000564664 TP53INP1Q96A56 240 aa11.26□□□□□ -0.61
GTF3C1-204ENST00000564664 MTERF1Q99551 399 aaKnown RBP11.26□□□□□ -0.61
GTF3C1-204ENST00000564664 NTMT1Q9BV86 223 aa11.26□□□□□ -0.61
GTF3C1-204ENST00000564664 ACSS3Q9H6R3 686 aa11.26□□□□□ -0.61
GTF3C1-204ENST00000564664 KCNJ16Q9NPI9 418 aa11.26□□□□□ -0.61
GTF3C1-204ENST00000564664 QPCTLQ9NXS2 382 aa11.26□□□□□ -0.61
GTF3C1-204ENST00000564664 AHSPQ9NZD4 102 aa11.26□□□□□ -0.61
GTF3C1-204ENST00000564664 ADAM29Q9UKF5 820 aa11.26□□□□□ -0.61
GTF3C1-204ENST00000564664 ATG4BQ9Y4P1 393 aa11.26□□□□□ -0.61
GTF3C1-204ENST00000564664 ASB4Q9Y574 426 aa11.26□□□□□ -0.61
GTF3C1-204ENST00000564664 PCDHGB3Q9Y5G1 929 aa11.26□□□□□ -0.61
GTF3C1-204ENST00000564664 CSMD1Q96PZ7 3565 aa11.26□□□□□ -0.61
GTF3C1-204ENST00000564664 ADGRG4Q8IZF6 3080 aa11.25□□□□□ -0.61
GTF3C1-204ENST00000564664 MYOCOSA0A1B0GUC4 107 aa11.25□□□□□ -0.61
GTF3C1-204ENST00000564664 FIGNL2A6NMB9 653 aa11.25□□□□□ -0.61
GTF3C1-204ENST00000564664 NPIPA2E9PIF3 369 aa11.25□□□□□ -0.61
GTF3C1-204ENST00000564664 NPIPA3F8WFD2 350 aa11.25□□□□□ -0.61
GTF3C1-204ENST00000564664 STX16-NPEPL1H3BU86 382 aa11.25□□□□□ -0.61
GTF3C1-204ENST00000564664 STX16O14662 325 aa11.25□□□□□ -0.61
GTF3C1-204ENST00000564664 ZNHIT1O43257 154 aa11.25□□□□□ -0.61
GTF3C1-204ENST00000564664 OR10H2O60403 315 aa11.25□□□□□ -0.61
GTF3C1-204ENST00000564664 WDR1O75083 606 aa11.25□□□□□ -0.61
GTF3C1-204ENST00000564664 SH3BGRLO75368 114 aa11.25□□□□□ -0.61
GTF3C1-204ENST00000564664 ALDOAP04075 364 aaKnown RBP11.25□□□□□ -0.61
GTF3C1-204ENST00000564664 CNTFP26441 200 aa11.25□□□□□ -0.61
GTF3C1-204ENST00000564664 ACVR2AP27037 513 aa11.25□□□□□ -0.61
GTF3C1-204ENST00000564664 BSGP35613 385 aa11.25□□□□□ -0.61
GTF3C1-204ENST00000564664 GMPRP36959 345 aa11.25□□□□□ -0.61
GTF3C1-204ENST00000564664 HNRNPH2P55795 449 aaKnown RBP11.25□□□□□ -0.61
GTF3C1-204ENST00000564664 SLC7A5Q01650 507 aa11.25□□□□□ -0.61
GTF3C1-204ENST00000564664 ID2Q02363 134 aa11.25□□□□□ -0.61
GTF3C1-204ENST00000564664 PMPCAQ10713 525 aa11.25□□□□□ -0.61
GTF3C1-204ENST00000564664 ASPHQ12797 758 aa11.25□□□□□ -0.61
GTF3C1-204ENST00000564664 CPSF6Q16630 551 aaKnown RBP eCLIP11.25□□□□□ -0.61
GTF3C1-204ENST00000564664 TSNAXIP1Q2TAA8 658 aa11.25□□□□□ -0.61
GTF3C1-204ENST00000564664 EMC4Q5J8M3 183 aa11.25□□□□□ -0.61
GTF3C1-204ENST00000564664 TBCELQ5QJ74 424 aa11.25□□□□□ -0.61
GTF3C1-204ENST00000564664 C18orf63Q68DL7 685 aa11.25□□□□□ -0.61
GTF3C1-204ENST00000564664 GOLGA7Q7Z5G4 137 aa11.25□□□□□ -0.61
GTF3C1-204ENST00000564664 TAGAPQ8N103 731 aa11.25□□□□□ -0.61
GTF3C1-204ENST00000564664 CNPY4Q8N129 248 aa11.25□□□□□ -0.61
GTF3C1-204ENST00000564664 MARVELD2Q8N4S9 558 aa11.25□□□□□ -0.61
GTF3C1-204ENST00000564664 TMEM251Q8N6I4 163 aa11.25□□□□□ -0.61
GTF3C1-204ENST00000564664 WDR20Q8TBZ3 569 aa11.25□□□□□ -0.61
GTF3C1-204ENST00000564664 TRPC4APQ8TEL6 797 aa11.25□□□□□ -0.61
GTF3C1-204ENST00000564664 ATP6V1E2Q96A05 226 aa11.25□□□□□ -0.61
GTF3C1-204ENST00000564664 ISL2Q96A47 359 aa11.25□□□□□ -0.61
GTF3C1-204ENST00000564664 PPWD1Q96BP3 646 aaKnown RBP11.25□□□□□ -0.61
GTF3C1-204ENST00000564664 SARAFQ96BY9 339 aa11.25□□□□□ -0.61
GTF3C1-204ENST00000564664 SPACA9Q96E40 222 aaPredicted RBP11.25□□□□□ -0.61
GTF3C1-204ENST00000564664 SMC6Q96SB8 1091 aa11.25□□□□□ -0.61
GTF3C1-204ENST00000564664 LRRC1Q9BTT6 524 aa11.25□□□□□ -0.61
GTF3C1-204ENST00000564664 ZNF717Q9BY31 904 aaPredicted RBP11.25□□□□□ -0.61
GTF3C1-204ENST00000564664 MCCC2Q9HCC0 563 aa11.25□□□□□ -0.61
GTF3C1-204ENST00000564664 ZFP64Q9NPA5 681 aa11.25□□□□□ -0.61
GTF3C1-204ENST00000564664 ACKR4Q9NPB9 350 aa11.25□□□□□ -0.61
GTF3C1-204ENST00000564664 BOKQ9UMX3 212 aaPredicted RBP11.25□□□□□ -0.61
GTF3C1-204ENST00000564664 RNF6Q9Y252 685 aa11.25□□□□□ -0.61
GTF3C1-204ENST00000564664 IKBKGQ9Y6K9 419 aa11.25□□□□□ -0.61
GTF3C1-204ENST00000564664 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.25□□□□□ -0.61
GTF3C1-204ENST00000564664 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.25□□□□□ -0.61
GTF3C1-204ENST00000564664 PDZD2O15018 2839 aa11.24□□□□□ -0.61
GTF3C1-204ENST00000564664 DCHS2Q6V1P9 2916 aa11.24□□□□□ -0.61
GTF3C1-204ENST00000564664 A0A1W2PR48 441 aa11.24□□□□□ -0.61
GTF3C1-204ENST00000564664 ANKRD33BA6NCL7 494 aa11.24□□□□□ -0.61
GTF3C1-204ENST00000564664 FAM166BA8MTA8 275 aa11.24□□□□□ -0.61
GTF3C1-204ENST00000564664 ZNF354AO60765 605 aaPredicted RBP11.24□□□□□ -0.61
GTF3C1-204ENST00000564664 GUCY1B2O75343 617 aa11.24□□□□□ -0.61
GTF3C1-204ENST00000564664 INHBAP08476 426 aa11.24□□□□□ -0.61
GTF3C1-204ENST00000564664 FBXO45P0C2W1 286 aa11.24□□□□□ -0.61
GTF3C1-204ENST00000564664 NR2F6P10588 404 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms