RNA–Protein interactions for RNA: ENST00000564096.1

CLK3-214, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 805 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-214ENST00000564096 STK17BO94768 372 aa12.05□□□□□ -0.48
CLK3-214ENST00000564096 ONECUT2O95948 504 aa12.05□□□□□ -0.48
CLK3-214ENST00000564096 CCNYL3P0C7X3 344 aa12.05□□□□□ -0.48
CLK3-214ENST00000564096 ZCCHC18P0CG32 403 aa12.05□□□□□ -0.48
CLK3-214ENST00000564096 CPMP14384 443 aa12.05□□□□□ -0.48
CLK3-214ENST00000564096 CD1EP15812 388 aa12.05□□□□□ -0.48
CLK3-214ENST00000564096 PORP16435 677 aaPredicted RBP12.05□□□□□ -0.48
CLK3-214ENST00000564096 CD82P27701 267 aa12.05□□□□□ -0.48
CLK3-214ENST00000564096 ETV5P41161 510 aa12.05□□□□□ -0.48
CLK3-214ENST00000564096 XKP51811 444 aa12.05□□□□□ -0.48
CLK3-214ENST00000564096 PSME3P61289 254 aa12.05□□□□□ -0.48
CLK3-214ENST00000564096 PHC1P78364 1004 aa12.05□□□□□ -0.48
CLK3-214ENST00000564096 PRR5P85299 388 aa12.05□□□□□ -0.48
CLK3-214ENST00000564096 SLC25A3Q00325 362 aa12.05□□□□□ -0.48
CLK3-214ENST00000564096 RSPO4Q2I0M5 234 aaPredicted RBP12.05□□□□□ -0.48
CLK3-214ENST00000564096 SPRED3Q2MJR0 410 aa12.05□□□□□ -0.48
CLK3-214ENST00000564096 ZNF385CQ66K41 422 aaPredicted RBP12.05□□□□□ -0.48
CLK3-214ENST00000564096 TMEM64Q6YI46 380 aa12.05□□□□□ -0.48
CLK3-214ENST00000564096 RINLQ6ZS11 566 aa12.05□□□□□ -0.48
CLK3-214ENST00000564096 SCUBE1Q8IWY4 988 aa12.05□□□□□ -0.48
CLK3-214ENST00000564096 GOT1L1Q8NHS2 421 aaPredicted RBP12.05□□□□□ -0.48
CLK3-214ENST00000564096 SFXN5Q8TD22 340 aa12.05□□□□□ -0.48
CLK3-214ENST00000564096 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.05□□□□□ -0.48
CLK3-214ENST00000564096 MR1Q95460 341 aa12.05□□□□□ -0.48
CLK3-214ENST00000564096 MIEF2Q96C03 454 aa12.05□□□□□ -0.48
CLK3-214ENST00000564096 SLC7A6OSQ96CW6 309 aaPredicted RBP12.05□□□□□ -0.48
CLK3-214ENST00000564096 CNRIP1Q96F85 164 aaPredicted RBP12.05□□□□□ -0.48
CLK3-214ENST00000564096 AMDHD1Q96NU7 426 aa12.05□□□□□ -0.48
CLK3-214ENST00000564096 TGIF2Q9GZN2 237 aa12.05□□□□□ -0.48
CLK3-214ENST00000564096 SLC26A1Q9H2B4 701 aa12.05□□□□□ -0.48
CLK3-214ENST00000564096 MMADHCQ9H3L0 296 aaPredicted RBP12.05□□□□□ -0.48
CLK3-214ENST00000564096 WDR54Q9H977 334 aa12.05□□□□□ -0.48
CLK3-214ENST00000564096 POLR1BQ9H9Y6 1135 aa12.05□□□□□ -0.48
CLK3-214ENST00000564096 SERHLQ9NQF3 203 aa12.05□□□□□ -0.48
CLK3-214ENST00000564096 TAS2R1Q9NYW7 299 aa12.05□□□□□ -0.48
CLK3-214ENST00000564096 CTSFQ9UBX1 484 aa12.05□□□□□ -0.48
CLK3-214ENST00000564096 PADI2Q9Y2J8 665 aa12.05□□□□□ -0.48
CLK3-214ENST00000564096 TMEM184BQ9Y519 407 aaPredicted RBP12.05□□□□□ -0.48
CLK3-214ENST00000564096 SNX8Q9Y5X2 465 aa12.05□□□□□ -0.48
CLK3-214ENST00000564096 B3GALT1Q9Y5Z6 326 aa12.05□□□□□ -0.48
CLK3-214ENST00000564096 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.05□□□□□ -0.48
CLK3-214ENST00000564096 IGLV3-12A0A075B6K2 115 aa12.04□□□□□ -0.48
CLK3-214ENST00000564096 RNF103-CHMP3A0A140T963 221 aa12.04□□□□□ -0.48
CLK3-214ENST00000564096 EVPLLA8MZ36 301 aa12.04□□□□□ -0.48
CLK3-214ENST00000564096 FAM227AF5H4B4 570 aa12.04□□□□□ -0.48
CLK3-214ENST00000564096 FXYD1O00168 92 aa12.04□□□□□ -0.48
CLK3-214ENST00000564096 LDB3O75112 727 aa12.04□□□□□ -0.48
CLK3-214ENST00000564096 DNAJB6O75190 326 aa12.04□□□□□ -0.48
CLK3-214ENST00000564096 KRT75O95678 551 aa12.04□□□□□ -0.48
CLK3-214ENST00000564096 ATP1B1P05026 303 aa12.04□□□□□ -0.48
CLK3-214ENST00000564096 IFI6P09912 130 aa12.04□□□□□ -0.48
CLK3-214ENST00000564096 SLC35E2P0CK97 266 aa12.04□□□□□ -0.48
CLK3-214ENST00000564096 C8orf89P0DMQ9 161 aa12.04□□□□□ -0.48
CLK3-214ENST00000564096 EFNA1P20827 205 aaPredicted RBP12.04□□□□□ -0.48
CLK3-214ENST00000564096 RBMS1P29558 406 aaKnown RBP12.04□□□□□ -0.48
CLK3-214ENST00000564096 CHI3L1P36222 383 aaPredicted RBP12.04□□□□□ -0.48
CLK3-214ENST00000564096 CPOXP36551 454 aa12.04□□□□□ -0.48
CLK3-214ENST00000564096 FEN1P39748 380 aaKnown RBP12.04□□□□□ -0.48
CLK3-214ENST00000564096 HBA1P69905 142 aa12.04□□□□□ -0.48
CLK3-214ENST00000564096 GABREP78334 506 aa12.04□□□□□ -0.48
CLK3-214ENST00000564096 COL9A2Q14055 689 aaPredicted RBP12.04□□□□□ -0.48
CLK3-214ENST00000564096 MAP7Q14244 749 aa12.04□□□□□ -0.48
CLK3-214ENST00000564096 CAPRIN1Q14444 709 aaKnown RBP12.04□□□□□ -0.48
CLK3-214ENST00000564096 MPEG1Q2M385 716 aa12.04□□□□□ -0.48
CLK3-214ENST00000564096 SPATS1Q496A3 300 aa12.04□□□□□ -0.48
CLK3-214ENST00000564096 SAMD4BQ5PRF9 694 aaKnown RBP12.04□□□□□ -0.48
CLK3-214ENST00000564096 C6orf15Q6UXA7 325 aaPredicted RBP12.04□□□□□ -0.48
CLK3-214ENST00000564096 ANGPTL8Q6UXH0 198 aa12.04□□□□□ -0.48
CLK3-214ENST00000564096 ZNF621Q6ZSS3 439 aa12.04□□□□□ -0.48
CLK3-214ENST00000564096 COX15Q7KZN9 410 aa12.04□□□□□ -0.48
CLK3-214ENST00000564096 ASRGL1Q7L266 308 aa12.04□□□□□ -0.48
CLK3-214ENST00000564096 SZRD1Q7Z422 152 aa12.04□□□□□ -0.48
CLK3-214ENST00000564096 ST13P4Q8IZP2 240 aaPredicted RBP12.04□□□□□ -0.48
CLK3-214ENST00000564096 ESX1Q8N693 406 aa12.04□□□□□ -0.48
CLK3-214ENST00000564096 SLC38A9Q8NBW4 561 aa12.04□□□□□ -0.48
CLK3-214ENST00000564096 TMEM52Q8NDY8 209 aa12.04□□□□□ -0.48
CLK3-214ENST00000564096 OR56A1Q8NGH5 318 aa12.04□□□□□ -0.48
CLK3-214ENST00000564096 NUDT8Q8WV74 236 aa12.04□□□□□ -0.48
CLK3-214ENST00000564096 PMEPA1Q969W9 287 aa12.04□□□□□ -0.48
CLK3-214ENST00000564096 DGAT2Q96PD7 388 aa12.04□□□□□ -0.48
CLK3-214ENST00000564096 SLC35A5Q9BS91 424 aa12.04□□□□□ -0.48
CLK3-214ENST00000564096 INPP5KQ9BT40 448 aa12.04□□□□□ -0.48
CLK3-214ENST00000564096 PAIP1Q9H074 479 aaKnown RBP12.04□□□□□ -0.48
CLK3-214ENST00000564096 GLIPR2Q9H4G4 154 aa12.04□□□□□ -0.48
CLK3-214ENST00000564096 SLAMF7Q9NQ25 335 aa12.04□□□□□ -0.48
CLK3-214ENST00000564096 LANCL2Q9NS86 450 aa12.04□□□□□ -0.48
CLK3-214ENST00000564096 DDX18Q9NVP1 670 aaKnown RBP12.04□□□□□ -0.48
CLK3-214ENST00000564096 ADA2Q9NZK5 511 aa12.04□□□□□ -0.48
CLK3-214ENST00000564096 MAP10Q9P2G4 905 aa12.04□□□□□ -0.48
CLK3-214ENST00000564096 TNFSF15O95150 251 aa12.03□□□□□ -0.48
CLK3-214ENST00000564096 DLGAP3O95886 979 aa12.03□□□□□ -0.48
CLK3-214ENST00000564096 IFNA16P05015 189 aa12.03□□□□□ -0.48
CLK3-214ENST00000564096 HEXBP07686 556 aa12.03□□□□□ -0.48
CLK3-214ENST00000564096 ZGLP1P0C6A0 271 aa12.03□□□□□ -0.48
CLK3-214ENST00000564096 ZNF28P17035 718 aa12.03□□□□□ -0.48
CLK3-214ENST00000564096 NT5EP21589 574 aa12.03□□□□□ -0.48
CLK3-214ENST00000564096 UQCRC2P22695 453 aa12.03□□□□□ -0.48
CLK3-214ENST00000564096 PGM1P36871 562 aa12.03□□□□□ -0.48
CLK3-214ENST00000564096 CDKN2CP42773 168 aa12.03□□□□□ -0.48
CLK3-214ENST00000564096 ANXA11P50995 505 aaKnown RBP12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms