RNA–Protein interactions for RNA: ENST00000563643.1

E4F1-203, Transcript of E4F transcription factor 1, humanhuman

TSL 3

Gene E4F1, Length 793 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
E4F1-203ENST00000563643 DYRK1BQ9Y463 629 aa16.71■□□□□ 0.27
E4F1-203ENST00000563643 TRIM49D1C9J1S8 452 aa16.7■□□□□ 0.26
E4F1-203ENST00000563643 TAPBPO15533 448 aa16.7■□□□□ 0.26
E4F1-203ENST00000563643 WDR47O94967 919 aa16.7■□□□□ 0.26
E4F1-203ENST00000563643 S100BP04271 92 aaPredicted RBP16.7■□□□□ 0.26
E4F1-203ENST00000563643 SNRPAP09012 282 aaKnown RBP16.7■□□□□ 0.26
E4F1-203ENST00000563643 IL10P22301 178 aa16.7■□□□□ 0.26
E4F1-203ENST00000563643 GCAP28676 217 aa16.7■□□□□ 0.26
E4F1-203ENST00000563643 GDF5P43026 501 aa16.7■□□□□ 0.26
E4F1-203ENST00000563643 ACAP2Q15057 778 aa16.7■□□□□ 0.26
E4F1-203ENST00000563643 C18orf21Q32NC0 220 aaPredicted RBP16.7■□□□□ 0.26
E4F1-203ENST00000563643 LGSNQ5TDP6 509 aa16.7■□□□□ 0.26
E4F1-203ENST00000563643 HEPHL1Q6MZM0 1159 aa16.7■□□□□ 0.26
E4F1-203ENST00000563643 TMEM214Q6NUQ4 689 aaKnown RBP16.7■□□□□ 0.26
E4F1-203ENST00000563643 KLC3Q6P597 504 aa16.7■□□□□ 0.26
E4F1-203ENST00000563643 POMZP3Q6PJE2 187 aa16.7■□□□□ 0.26
E4F1-203ENST00000563643 ADGRD1Q6QNK2 874 aa16.7■□□□□ 0.26
E4F1-203ENST00000563643 GK5Q6ZS86 529 aa16.7■□□□□ 0.26
E4F1-203ENST00000563643 VN1R4Q7Z5H5 301 aa16.7■□□□□ 0.26
E4F1-203ENST00000563643 TNIP2Q8NFZ5 429 aa16.7■□□□□ 0.26
E4F1-203ENST00000563643 TSNARE1Q96NA8 513 aa16.7■□□□□ 0.26
E4F1-203ENST00000563643 GPR78Q96P69 363 aa16.7■□□□□ 0.26
E4F1-203ENST00000563643 CCL19Q99731 98 aa16.7■□□□□ 0.26
E4F1-203ENST00000563643 MACROD1Q9BQ69 325 aa16.7■□□□□ 0.26
E4F1-203ENST00000563643 VPS11Q9H270 941 aa16.7■□□□□ 0.26
E4F1-203ENST00000563643 ANKHQ9HCJ1 492 aa16.7■□□□□ 0.26
E4F1-203ENST00000563643 ADGRE2Q9UHX3 823 aa16.7■□□□□ 0.26
E4F1-203ENST00000563643 TRBV11-1A0A0K0K1C0 115 aa16.69■□□□□ 0.26
E4F1-203ENST00000563643 ATP6AP2A0A1C7CYW4 349 aa16.69■□□□□ 0.26
E4F1-203ENST00000563643 TRBC2A0A5B9 178 aa16.69■□□□□ 0.26
E4F1-203ENST00000563643 SYCE1LA8MT33 242 aa16.69■□□□□ 0.26
E4F1-203ENST00000563643 G3V3Y1 287 aa16.69■□□□□ 0.26
E4F1-203ENST00000563643 STK16O75716 305 aa16.69■□□□□ 0.26
E4F1-203ENST00000563643 ATP6AP2O75787 350 aa16.69■□□□□ 0.26
E4F1-203ENST00000563643 GNAZP19086 355 aa16.69■□□□□ 0.26
E4F1-203ENST00000563643 ENDOUP21128 410 aaKnown RBP16.69■□□□□ 0.26
E4F1-203ENST00000563643 SSR4P51571 173 aa16.69■□□□□ 0.26
E4F1-203ENST00000563643 NXPE4Q6UWF7 544 aa16.69■□□□□ 0.26
E4F1-203ENST00000563643 ULK2Q8IYT8 1036 aa16.69■□□□□ 0.26
E4F1-203ENST00000563643 TBC1D19Q8N5T2 526 aa16.69■□□□□ 0.26
E4F1-203ENST00000563643 MFSD9Q8NBP5 474 aa16.69■□□□□ 0.26
E4F1-203ENST00000563643 NFAM1Q8NET5 270 aaPredicted RBP16.69■□□□□ 0.26
E4F1-203ENST00000563643 ZCCHC10Q8TBK6 192 aa16.69■□□□□ 0.26
E4F1-203ENST00000563643 EXT2Q93063 718 aa16.69■□□□□ 0.26
E4F1-203ENST00000563643 MTBPQ96DY7 904 aa16.69■□□□□ 0.26
E4F1-203ENST00000563643 DACH2Q96NX9 599 aa16.69■□□□□ 0.26
E4F1-203ENST00000563643 LDAHQ9H6V9 325 aa16.69■□□□□ 0.26
E4F1-203ENST00000563643 DNAJC11Q9NVH1 559 aa16.69■□□□□ 0.26
E4F1-203ENST00000563643 GPRC5BQ9NZH0 403 aa16.69■□□□□ 0.26
E4F1-203ENST00000563643 SPRR3Q9UBC9 169 aa16.69■□□□□ 0.26
E4F1-203ENST00000563643 ZNF860A6NHJ4 632 aa16.68■□□□□ 0.26
E4F1-203ENST00000563643 A8MVJ9 347 aa16.68■□□□□ 0.26
E4F1-203ENST00000563643 SUPT3HB4E1H0 165 aa16.68■□□□□ 0.26
E4F1-203ENST00000563643 UBXN8O00124 270 aa16.68■□□□□ 0.26
E4F1-203ENST00000563643 SUPT3HO75486 399 aa16.68■□□□□ 0.26
E4F1-203ENST00000563643 FHP07954 510 aa16.68■□□□□ 0.26
E4F1-203ENST00000563643 COL6A2P12110 1019 aa16.68■□□□□ 0.26
E4F1-203ENST00000563643 MTHFD2P13995 350 aa16.68■□□□□ 0.26
E4F1-203ENST00000563643 HSPA7P48741 367 aa16.68■□□□□ 0.26
E4F1-203ENST00000563643 VSNL1P62760 191 aa16.68■□□□□ 0.26
E4F1-203ENST00000563643 REEP5Q00765 189 aa16.68■□□□□ 0.26
E4F1-203ENST00000563643 TIFABQ6ZNK6 161 aa16.68■□□□□ 0.26
E4F1-203ENST00000563643 SLCO4C1Q6ZQN7 724 aa16.68■□□□□ 0.26
E4F1-203ENST00000563643 TMPRSS11BQ86T26 416 aa16.68■□□□□ 0.26
E4F1-203ENST00000563643 HIPK1Q86Z02 1210 aa16.68■□□□□ 0.26
E4F1-203ENST00000563643 FBXW8Q8N3Y1 598 aa16.68■□□□□ 0.26
E4F1-203ENST00000563643 CAMKVQ8NCB2 501 aa16.68■□□□□ 0.26
E4F1-203ENST00000563643 APCDD1LQ8NCL9 501 aa16.68■□□□□ 0.26
E4F1-203ENST00000563643 UBTD2Q8WUN7 234 aa16.68■□□□□ 0.26
E4F1-203ENST00000563643 TM4SF19Q96DZ7 209 aa16.68■□□□□ 0.26
E4F1-203ENST00000563643 AIF1LQ9BQI0 150 aa16.68■□□□□ 0.26
E4F1-203ENST00000563643 CCDC77Q9BR77 488 aa16.68■□□□□ 0.26
E4F1-203ENST00000563643 CAPS2Q9BXY5 557 aa16.68■□□□□ 0.26
E4F1-203ENST00000563643 EXO5Q9H790 373 aa16.68■□□□□ 0.26
E4F1-203ENST00000563643 IL1RL2Q9HB29 575 aa16.68■□□□□ 0.26
E4F1-203ENST00000563643 HPF1Q9NWY4 346 aa16.68■□□□□ 0.26
E4F1-203ENST00000563643 PSMC3IPQ9P2W1 217 aaPredicted RBP16.68■□□□□ 0.26
E4F1-203ENST00000563643 FBXW2Q9UKT8 454 aa16.68■□□□□ 0.26
E4F1-203ENST00000563643 NAALAD2Q9Y3Q0 740 aa16.68■□□□□ 0.26
E4F1-203ENST00000563643 NPFFR2Q9Y5X5 522 aa16.68■□□□□ 0.26
E4F1-203ENST00000563643 OR1F1O43749 312 aa16.67■□□□□ 0.26
E4F1-203ENST00000563643 LCMT2O60294 686 aaKnown RBP16.67■□□□□ 0.26
E4F1-203ENST00000563643 CEACAM8P31997 349 aaPredicted RBP16.67■□□□□ 0.26
E4F1-203ENST00000563643 SCTRP47872 440 aa16.67■□□□□ 0.26
E4F1-203ENST00000563643 WNT3P56703 355 aa16.67■□□□□ 0.26
E4F1-203ENST00000563643 MEF2AQ02078 507 aaPredicted RBP16.67■□□□□ 0.26
E4F1-203ENST00000563643 TSNAXIP1Q2TAA8 658 aa16.67■□□□□ 0.26
E4F1-203ENST00000563643 KRTAP24-1Q3LI83 254 aa16.67■□□□□ 0.26
E4F1-203ENST00000563643 FBXO48Q5FWF7 155 aa16.67■□□□□ 0.26
E4F1-203ENST00000563643 LRRC70Q7Z2Q7 622 aa16.67■□□□□ 0.26
E4F1-203ENST00000563643 ASPGQ86U10 573 aa16.67■□□□□ 0.26
E4F1-203ENST00000563643 PLD6Q8N2A8 252 aaKnown RBP16.67■□□□□ 0.26
E4F1-203ENST00000563643 ZNF740Q8NDX6 193 aa16.67■□□□□ 0.26
E4F1-203ENST00000563643 OR5T3Q8NGG3 340 aa16.67■□□□□ 0.26
E4F1-203ENST00000563643 PPP1R14CQ8TAE6 165 aa16.67■□□□□ 0.26
E4F1-203ENST00000563643 UBLCP1Q8WVY7 318 aaPredicted RBP16.67■□□□□ 0.26
E4F1-203ENST00000563643 FAM173AQ9BQD7 235 aa16.67■□□□□ 0.26
E4F1-203ENST00000563643 GSX2Q9BZM3 304 aa16.67■□□□□ 0.26
E4F1-203ENST00000563643 CD244Q9BZW8 370 aa16.67■□□□□ 0.26
E4F1-203ENST00000563643 EIF3LQ9Y262 564 aaKnown RBP16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms