RNA–Protein interactions for RNA: ENST00000563207.1

USB1-208, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 5

Gene USB1, Length 464 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-208ENST00000563207 DYDC1Q8WWB3 177 aa14.66□□□□□ -0.06
USB1-208ENST00000563207 HAS2Q92819 552 aa14.66□□□□□ -0.06
USB1-208ENST00000563207 TSLPQ969D9 159 aa14.66□□□□□ -0.06
USB1-208ENST00000563207 PEX11GQ96HA9 241 aa14.66□□□□□ -0.06
USB1-208ENST00000563207 ZNF717Q9BY31 904 aaPredicted RBP14.66□□□□□ -0.06
USB1-208ENST00000563207 ACPTQ9BZG2 426 aa14.66□□□□□ -0.06
USB1-208ENST00000563207 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP14.66□□□□□ -0.06
USB1-208ENST00000563207 OLAHQ9NV23 265 aa14.66□□□□□ -0.06
USB1-208ENST00000563207 LYARQ9NX58 379 aaKnown RBP14.66□□□□□ -0.06
USB1-208ENST00000563207 SIRT5Q9NXA8 310 aa14.66□□□□□ -0.06
USB1-208ENST00000563207 ZDHHC2Q9UIJ5 367 aa14.66□□□□□ -0.06
USB1-208ENST00000563207 POLEQ07864 2286 aa14.66□□□□□ -0.06
USB1-208ENST00000563207 ARHGAP10A1A4S6 786 aa14.65□□□□□ -0.06
USB1-208ENST00000563207 RTCAO00442 366 aaKnown RBP14.65□□□□□ -0.06
USB1-208ENST00000563207 CLDN4O14493 209 aa14.65□□□□□ -0.06
USB1-208ENST00000563207 ZG16O60844 167 aa14.65□□□□□ -0.06
USB1-208ENST00000563207 GUCY1B2O75343 617 aa14.65□□□□□ -0.06
USB1-208ENST00000563207 RSL1D1O76021 490 aaKnown RBP14.65□□□□□ -0.06
USB1-208ENST00000563207 CERS1P27544 350 aa14.65□□□□□ -0.06
USB1-208ENST00000563207 SERPINB3P29508 390 aa14.65□□□□□ -0.06
USB1-208ENST00000563207 TLX1P31314 330 aaPredicted RBP14.65□□□□□ -0.06
USB1-208ENST00000563207 GSTM5P46439 218 aa14.65□□□□□ -0.06
USB1-208ENST00000563207 HTR6P50406 440 aa14.65□□□□□ -0.06
USB1-208ENST00000563207 TRA2BP62995 288 aaKnown RBP14.65□□□□□ -0.06
USB1-208ENST00000563207 ACSM2AQ08AH3 577 aa14.65□□□□□ -0.06
USB1-208ENST00000563207 TBL3Q12788 808 aaKnown RBP14.65□□□□□ -0.06
USB1-208ENST00000563207 SLAMF1Q13291 335 aa14.65□□□□□ -0.06
USB1-208ENST00000563207 RUNX2Q13950 521 aa14.65□□□□□ -0.06
USB1-208ENST00000563207 BTBD16Q32M84 506 aa14.65□□□□□ -0.06
USB1-208ENST00000563207 CES4AQ5XG92 561 aa14.65□□□□□ -0.06
USB1-208ENST00000563207 ACSM2BQ68CK6 577 aa14.65□□□□□ -0.06
USB1-208ENST00000563207 MRM1Q6IN84 353 aaKnown RBP14.65□□□□□ -0.06
USB1-208ENST00000563207 RPUSD3Q6P087 351 aaKnown RBP14.65□□□□□ -0.06
USB1-208ENST00000563207 FJX1Q86VR8 437 aa14.65□□□□□ -0.06
USB1-208ENST00000563207 PLPP5Q8NEB5 264 aa14.65□□□□□ -0.06
USB1-208ENST00000563207 FAM76AQ8TAV0 307 aa14.65□□□□□ -0.06
USB1-208ENST00000563207 TWIST2Q8WVJ9 160 aa14.65□□□□□ -0.06
USB1-208ENST00000563207 ZNF75CPQ92670 426 aaPredicted RBP14.65□□□□□ -0.06
USB1-208ENST00000563207 HBEGFQ99075 208 aa14.65□□□□□ -0.06
USB1-208ENST00000563207 SORT1Q99523 831 aa14.65□□□□□ -0.06
USB1-208ENST00000563207 MRPL1Q9BYD6 325 aaKnown RBP14.65□□□□□ -0.06
USB1-208ENST00000563207 HES7Q9BYE0 225 aa14.65□□□□□ -0.06
USB1-208ENST00000563207 LANCL2Q9NS86 450 aa14.65□□□□□ -0.06
USB1-208ENST00000563207 ANKRD10Q9NXR5 420 aa14.65□□□□□ -0.06
USB1-208ENST00000563207 STMN3Q9NZ72 180 aa14.65□□□□□ -0.06
USB1-208ENST00000563207 KCMF1Q9P0J7 381 aa14.65□□□□□ -0.06
USB1-208ENST00000563207 A0A0A6YYD5 115 aa14.64□□□□□ -0.07
USB1-208ENST00000563207 SLCO1B7G3V0H7 640 aa14.64□□□□□ -0.07
USB1-208ENST00000563207 LYPLA1O75608 230 aaPredicted RBP14.64□□□□□ -0.07
USB1-208ENST00000563207 BUD31P41223 144 aaPredicted RBP14.64□□□□□ -0.07
USB1-208ENST00000563207 HK2P52789 917 aa14.64□□□□□ -0.07
USB1-208ENST00000563207 HSD17B7P56937 341 aa14.64□□□□□ -0.07
USB1-208ENST00000563207 RHAGQ02094 409 aa14.64□□□□□ -0.07
USB1-208ENST00000563207 BIKQ13323 160 aa14.64□□□□□ -0.07
USB1-208ENST00000563207 GALNT18Q6P9A2 607 aa14.64□□□□□ -0.07
USB1-208ENST00000563207 QSOX2Q6ZRP7 698 aa14.64□□□□□ -0.07
USB1-208ENST00000563207 RIPOR1Q6ZS17 1223 aa14.64□□□□□ -0.07
USB1-208ENST00000563207 COMMD6Q7Z4G1 85 aa14.64□□□□□ -0.07
USB1-208ENST00000563207 GPR180Q86V85 440 aa14.64□□□□□ -0.07
USB1-208ENST00000563207 ZNF595Q8IYB9 648 aa14.64□□□□□ -0.07
USB1-208ENST00000563207 BEST3Q8N1M1 668 aa14.64□□□□□ -0.07
USB1-208ENST00000563207 BCORP1Q8N888 145 aa14.64□□□□□ -0.07
USB1-208ENST00000563207 ZNF781Q8N8C0 355 aa14.64□□□□□ -0.07
USB1-208ENST00000563207 LRRC8CQ8TDW0 803 aa14.64□□□□□ -0.07
USB1-208ENST00000563207 METTL21AQ8WXB1 218 aa14.64□□□□□ -0.07
USB1-208ENST00000563207 C11orf24Q96F05 449 aaPredicted RBP14.64□□□□□ -0.07
USB1-208ENST00000563207 SIGLEC12Q96PQ1 595 aa14.64□□□□□ -0.07
USB1-208ENST00000563207 TUBB6Q9BUF5 446 aa14.64□□□□□ -0.07
USB1-208ENST00000563207 C20orf27Q9GZN8 174 aa14.64□□□□□ -0.07
USB1-208ENST00000563207 PRDM9Q9NQV7 894 aa14.64□□□□□ -0.07
USB1-208ENST00000563207 MCM8Q9UJA3 840 aa14.64□□□□□ -0.07
USB1-208ENST00000563207 WBP11Q9Y2W2 641 aaKnown RBP14.64□□□□□ -0.07
USB1-208ENST00000563207 FIS1Q9Y3D6 152 aa14.64□□□□□ -0.07
USB1-208ENST00000563207 MMACHCQ9Y4U1 282 aa14.64□□□□□ -0.07
USB1-208ENST00000563207 CCL27Q9Y4X3 112 aa14.64□□□□□ -0.07
USB1-208ENST00000563207 LRBAP50851 2863 aa14.63□□□□□ -0.07
USB1-208ENST00000563207 TRAV17A0A0B4J275 112 aa14.63□□□□□ -0.07
USB1-208ENST00000563207 CYR61O00622 381 aa14.63□□□□□ -0.07
USB1-208ENST00000563207 ZNHIT1O43257 154 aa14.63□□□□□ -0.07
USB1-208ENST00000563207 PRMT3O60678 531 aa14.63□□□□□ -0.07
USB1-208ENST00000563207 EEDO75530 441 aaKnown RBP14.63□□□□□ -0.07
USB1-208ENST00000563207 KLK1P06870 262 aa14.63□□□□□ -0.07
USB1-208ENST00000563207 FAM58BPP0C7Q3 252 aa14.63□□□□□ -0.07
USB1-208ENST00000563207 BTG2P78543 158 aa14.63□□□□□ -0.07
USB1-208ENST00000563207 HMGCS1Q01581 520 aa14.63□□□□□ -0.07
USB1-208ENST00000563207 SFT2D3Q587I9 215 aa14.63□□□□□ -0.07
USB1-208ENST00000563207 SPDYAQ5MJ70 313 aa14.63□□□□□ -0.07
USB1-208ENST00000563207 CCNYL2Q5T2Q4 361 aa14.63□□□□□ -0.07
USB1-208ENST00000563207 ABHD17BQ5VST6 288 aa14.63□□□□□ -0.07
USB1-208ENST00000563207 SCIMPQ6UWF3 145 aa14.63□□□□□ -0.07
USB1-208ENST00000563207 CRLF3Q8IUI8 442 aa14.63□□□□□ -0.07
USB1-208ENST00000563207 DDIASQ8IXT1 998 aa14.63□□□□□ -0.07
USB1-208ENST00000563207 C1orf52Q8N6N3 182 aaKnown RBP14.63□□□□□ -0.07
USB1-208ENST00000563207 AGR3Q8TD06 166 aa14.63□□□□□ -0.07
USB1-208ENST00000563207 NR4A3Q92570 626 aa14.63□□□□□ -0.07
USB1-208ENST00000563207 MAGEB18Q96M61 343 aa14.63□□□□□ -0.07
USB1-208ENST00000563207 SORBS1Q9BX66 1292 aaKnown RBP14.63□□□□□ -0.07
USB1-208ENST00000563207 WDR41Q9HAD4 459 aa14.63□□□□□ -0.07
USB1-208ENST00000563207 C19orf25Q9UFG5 118 aaPredicted RBP14.63□□□□□ -0.07
USB1-208ENST00000563207 TMED5Q9Y3A6 229 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms