RNA–Protein interactions for RNA: ENST00000563112.1

CLK3-210, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 665 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-210ENST00000563112 SGCZQ96LD1 299 aa15.62■□□□□ 0.09
CLK3-210ENST00000563112 ZBTB26Q9HCK0 441 aa15.62■□□□□ 0.09
CLK3-210ENST00000563112 A0A1W2PR48 441 aa15.61■□□□□ 0.09
CLK3-210ENST00000563112 GLOD5A6NK44 160 aa15.61■□□□□ 0.09
CLK3-210ENST00000563112 A8MT66 165 aa15.61■□□□□ 0.09
CLK3-210ENST00000563112 ACOT7O00154 380 aa15.61■□□□□ 0.09
CLK3-210ENST00000563112 RIPK2O43353 540 aa15.61■□□□□ 0.09
CLK3-210ENST00000563112 TMPRSS11DO60235 418 aa15.61■□□□□ 0.09
CLK3-210ENST00000563112 HS6ST1O60243 411 aa15.61■□□□□ 0.09
CLK3-210ENST00000563112 PRKRAO75569 313 aaKnown RBP15.61■□□□□ 0.09
CLK3-210ENST00000563112 RPS17P08708 135 aaKnown RBP15.61■□□□□ 0.09
CLK3-210ENST00000563112 RFC3P40938 356 aa15.61■□□□□ 0.09
CLK3-210ENST00000563112 HSF1Q00613 529 aa15.61■□□□□ 0.09
CLK3-210ENST00000563112 PLGLB1Q02325 96 aa15.61■□□□□ 0.09
CLK3-210ENST00000563112 MPEG1Q2M385 716 aa15.61■□□□□ 0.09
CLK3-210ENST00000563112 ZNF750Q32MQ0 723 aa15.61■□□□□ 0.09
CLK3-210ENST00000563112 SGO1Q5FBB7 561 aa15.61■□□□□ 0.09
CLK3-210ENST00000563112 SP5Q6BEB4 398 aaPredicted RBP15.61■□□□□ 0.09
CLK3-210ENST00000563112 OR52E8Q6IFG1 317 aa15.61■□□□□ 0.09
CLK3-210ENST00000563112 XKRXQ6PP77 449 aa15.61■□□□□ 0.09
CLK3-210ENST00000563112 PAOXQ6QHF9 649 aa15.61■□□□□ 0.09
CLK3-210ENST00000563112 MYRIPQ8NFW9 859 aa15.61■□□□□ 0.09
CLK3-210ENST00000563112 NUBPLQ8TB37 319 aa15.61■□□□□ 0.09
CLK3-210ENST00000563112 SLC22A8Q8TCC7 542 aa15.61■□□□□ 0.09
CLK3-210ENST00000563112 ZNF483Q8TF39 744 aaPredicted RBP15.61■□□□□ 0.09
CLK3-210ENST00000563112 RIT1Q92963 219 aa15.61■□□□□ 0.09
CLK3-210ENST00000563112 FBXL20Q96IG2 436 aa15.61■□□□□ 0.09
CLK3-210ENST00000563112 CNPPD1Q9BV87 410 aa15.61■□□□□ 0.09
CLK3-210ENST00000563112 NMRK1Q9NWW6 199 aa15.61■□□□□ 0.09
CLK3-210ENST00000563112 ADAM29Q9UKF5 820 aa15.61■□□□□ 0.09
CLK3-210ENST00000563112 SNX6Q9UNH7 406 aa15.61■□□□□ 0.09
CLK3-210ENST00000563112 ENTPD4Q9Y227 616 aa15.61■□□□□ 0.09
CLK3-210ENST00000563112 CDC40O60508 579 aaKnown RBP eCLIP15.6■□□□□ 0.09
CLK3-210ENST00000563112 GUCY1B2O75343 617 aa15.6■□□□□ 0.09
CLK3-210ENST00000563112 AIFM1O95831 613 aa15.6■□□□□ 0.09
CLK3-210ENST00000563112 GBAP04062 536 aa15.6■□□□□ 0.09
CLK3-210ENST00000563112 IGKV3-11P04433 115 aa15.6■□□□□ 0.09
CLK3-210ENST00000563112 P04436 131 aa15.6■□□□□ 0.09
CLK3-210ENST00000563112 KLK1P06870 262 aa15.6■□□□□ 0.09
CLK3-210ENST00000563112 SLC35E2P0CK97 266 aa15.6■□□□□ 0.09
CLK3-210ENST00000563112 CNR1P21554 472 aa15.6■□□□□ 0.09
CLK3-210ENST00000563112 PIK3R1P27986 724 aa15.6■□□□□ 0.09
CLK3-210ENST00000563112 GALNSP34059 522 aa15.6■□□□□ 0.09
CLK3-210ENST00000563112 PTGER1P34995 402 aa15.6■□□□□ 0.09
CLK3-210ENST00000563112 PTGS2P35354 604 aa15.6■□□□□ 0.09
CLK3-210ENST00000563112 CDH13P55290 713 aa15.6■□□□□ 0.09
CLK3-210ENST00000563112 ASPHQ12797 758 aa15.6■□□□□ 0.09
CLK3-210ENST00000563112 ZNF267Q14586 743 aaPredicted RBP15.6■□□□□ 0.09
CLK3-210ENST00000563112 SPRED3Q2MJR0 410 aa15.6■□□□□ 0.09
CLK3-210ENST00000563112 PIGGQ5H8A4 983 aa15.6■□□□□ 0.09
CLK3-210ENST00000563112 CCNYL2Q5T2Q4 361 aa15.6■□□□□ 0.09
CLK3-210ENST00000563112 RNF111Q6ZNA4 994 aa15.6■□□□□ 0.09
CLK3-210ENST00000563112 RGS9BPQ6ZS82 235 aa15.6■□□□□ 0.09
CLK3-210ENST00000563112 GK5Q6ZS86 529 aa15.6■□□□□ 0.09
CLK3-210ENST00000563112 SLC29A4Q7RTT9 530 aa15.6■□□□□ 0.09
CLK3-210ENST00000563112 SLC15A4Q8N697 577 aa15.6■□□□□ 0.09
CLK3-210ENST00000563112 GOLM1Q8NBJ4 401 aa15.6■□□□□ 0.09
CLK3-210ENST00000563112 OR2M7Q8NG81 312 aa15.6■□□□□ 0.09
CLK3-210ENST00000563112 SELENOMQ8WWX9 145 aa15.6■□□□□ 0.09
CLK3-210ENST00000563112 C1QTNF3Q9BXJ4 246 aa15.6■□□□□ 0.09
CLK3-210ENST00000563112 RUBCNLQ9H714 662 aa15.6■□□□□ 0.09
CLK3-210ENST00000563112 SACM1LQ9NTJ5 587 aa15.6■□□□□ 0.09
CLK3-210ENST00000563112 RYDENQ9NUL5 291 aaKnown RBP15.6■□□□□ 0.09
CLK3-210ENST00000563112 MEMO1Q9Y316 297 aa15.6■□□□□ 0.09
CLK3-210ENST00000563112 KLF2Q9Y5W3 355 aaPredicted RBP15.6■□□□□ 0.09
CLK3-210ENST00000563112 A0A1B0GTH9 108 aa15.59■□□□□ 0.09
CLK3-210ENST00000563112 HNRNPRO43390 633 aaKnown RBP15.59■□□□□ 0.09
CLK3-210ENST00000563112 SUPT7LO94864 414 aa15.59■□□□□ 0.09
CLK3-210ENST00000563112 SBK3P0C264 359 aa15.59■□□□□ 0.09
CLK3-210ENST00000563112 GCAP28676 217 aa15.59■□□□□ 0.09
CLK3-210ENST00000563112 PPIAP62937 165 aaKnown RBP15.59■□□□□ 0.09
CLK3-210ENST00000563112 HERVK_113P63132 956 aa15.59■□□□□ 0.09
CLK3-210ENST00000563112 ERVK-8P63133 956 aa15.59■□□□□ 0.09
CLK3-210ENST00000563112 CLCQ05315 142 aa15.59■□□□□ 0.09
CLK3-210ENST00000563112 SLC29A2Q14542 456 aa15.59■□□□□ 0.09
CLK3-210ENST00000563112 C6orf163Q5TEZ5 329 aa15.59■□□□□ 0.09
CLK3-210ENST00000563112 DGAT2L6Q6ZPD8 337 aa15.59■□□□□ 0.09
CLK3-210ENST00000563112 FAM47EQ6ZV65 393 aa15.59■□□□□ 0.09
CLK3-210ENST00000563112 SLC22A16Q86VW1 577 aa15.59■□□□□ 0.09
CLK3-210ENST00000563112 DOLPP1Q86YN1 238 aa15.59■□□□□ 0.09
CLK3-210ENST00000563112 METTL4Q8N3J2 472 aa15.59■□□□□ 0.09
CLK3-210ENST00000563112 TMEM151AQ8N4L1 468 aa15.59■□□□□ 0.09
CLK3-210ENST00000563112 OR4K14Q8NGD5 310 aa15.59■□□□□ 0.09
CLK3-210ENST00000563112 TRPC4APQ8TEL6 797 aa15.59■□□□□ 0.09
CLK3-210ENST00000563112 AGAP11Q8TF27 550 aa15.59■□□□□ 0.09
CLK3-210ENST00000563112 FAM173AQ9BQD7 235 aa15.59■□□□□ 0.09
CLK3-210ENST00000563112 ERVK-6Q9BXR3 956 aa15.59■□□□□ 0.09
CLK3-210ENST00000563112 MRPL1Q9BYD6 325 aaKnown RBP15.59■□□□□ 0.09
CLK3-210ENST00000563112 BRF2Q9HAW0 419 aa15.59■□□□□ 0.09
CLK3-210ENST00000563112 DEPPQ9NTK1 212 aa15.59■□□□□ 0.09
CLK3-210ENST00000563112 TMEM216Q9P0N5 145 aa15.59■□□□□ 0.09
CLK3-210ENST00000563112 PSMC3IPQ9P2W1 217 aaPredicted RBP15.59■□□□□ 0.09
CLK3-210ENST00000563112 FETUBQ9UGM5 382 aa15.59■□□□□ 0.09
CLK3-210ENST00000563112 TRPS1Q9UHF7 1281 aa15.59■□□□□ 0.09
CLK3-210ENST00000563112 SLC12A4Q9UP95 1085 aa15.59■□□□□ 0.09
CLK3-210ENST00000563112 ERVK-19Q9WJR5 959 aa15.59■□□□□ 0.09
CLK3-210ENST00000563112 OR6C76A6NM76 312 aa15.58■□□□□ 0.08
CLK3-210ENST00000563112 WASHC1A8K0Z3 465 aa15.58■□□□□ 0.08
CLK3-210ENST00000563112 PDYNP01213 254 aa15.58■□□□□ 0.08
CLK3-210ENST00000563112 TPOP07202 933 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms