RNA–Protein interactions for RNA: ENST00000561637.5

NME3-202, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 1,014 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-202ENST00000561637 TNPO3Q9Y5L0 923 aaKnown RBP23.42■■□□□ 1.34
NME3-202ENST00000561637 IKBKGQ9Y6K9 419 aa23.42■■□□□ 1.34
NME3-202ENST00000561637 TFECO14948 347 aaPredicted RBP23.41■■□□□ 1.34
NME3-202ENST00000561637 PROM1O43490 865 aa23.41■■□□□ 1.34
NME3-202ENST00000561637 UGDHO60701 494 aa23.41■■□□□ 1.34
NME3-202ENST00000561637 CLDN9O95484 217 aa23.41■■□□□ 1.34
NME3-202ENST00000561637 AIFM1O95831 613 aa23.41■■□□□ 1.34
NME3-202ENST00000561637 RBP1P09455 135 aa23.41■■□□□ 1.34
NME3-202ENST00000561637 CAPN3P20807 821 aa23.41■■□□□ 1.34
NME3-202ENST00000561637 PTX3P26022 381 aaPredicted RBP23.41■■□□□ 1.34
NME3-202ENST00000561637 GLE1Q53GS7 698 aaKnown RBP23.41■■□□□ 1.34
NME3-202ENST00000561637 C9orf40Q8IXQ3 194 aa23.41■■□□□ 1.34
NME3-202ENST00000561637 GHDCQ8N2G8 530 aa23.41■■□□□ 1.34
NME3-202ENST00000561637 OR52N2Q8NGI0 321 aa23.41■■□□□ 1.34
NME3-202ENST00000561637 SENP5Q96HI0 755 aaPredicted RBP23.41■■□□□ 1.34
NME3-202ENST00000561637 DGAT2Q96PD7 388 aa23.41■■□□□ 1.34
NME3-202ENST00000561637 A0A087WUV0 522 aaPredicted RBP23.4■■□□□ 1.34
NME3-202ENST00000561637 IGKV3-11P04433 115 aa23.4■■□□□ 1.34
NME3-202ENST00000561637 FAM153BP0C7A2 387 aa23.4■■□□□ 1.34
NME3-202ENST00000561637 ABOP16442 354 aa23.4■■□□□ 1.34
NME3-202ENST00000561637 AGAP20933 346 aa23.4■■□□□ 1.34
NME3-202ENST00000561637 CCNG1P51959 295 aa23.4■■□□□ 1.34
NME3-202ENST00000561637 FAM153CQ494X1 144 aa23.4■■□□□ 1.34
NME3-202ENST00000561637 SGO1Q5FBB7 561 aa23.4■■□□□ 1.34
NME3-202ENST00000561637 DOLPP1Q86YN1 238 aa23.4■■□□□ 1.34
NME3-202ENST00000561637 GSPT2Q8IYD1 628 aaKnown RBP23.4■■□□□ 1.34
NME3-202ENST00000561637 ZFP62Q8NB50 900 aaPredicted RBP23.4■■□□□ 1.34
NME3-202ENST00000561637 AGAP11Q8TF27 550 aa23.4■■□□□ 1.34
NME3-202ENST00000561637 ATP6V1E2Q96A05 226 aa23.4■■□□□ 1.34
NME3-202ENST00000561637 C14orf79Q96F83 325 aa23.4■■□□□ 1.34
NME3-202ENST00000561637 TSPYL1Q9H0U9 437 aa23.4■■□□□ 1.34
NME3-202ENST00000561637 DDX31Q9H8H2 851 aaKnown RBP23.4■■□□□ 1.34
NME3-202ENST00000561637 TIMMDC1Q9NPL8 285 aa23.4■■□□□ 1.34
NME3-202ENST00000561637 FARSBQ9NSD9 589 aaKnown RBP23.4■■□□□ 1.34
NME3-202ENST00000561637 TEX10Q9NXF1 929 aaPredicted RBP23.4■■□□□ 1.34
NME3-202ENST00000561637 PHF11Q9UIL8 331 aa23.4■■□□□ 1.34
NME3-202ENST00000561637 ZNF180Q9UJW8 692 aa23.4■■□□□ 1.34
NME3-202ENST00000561637 HRH3Q9Y5N1 445 aa23.4■■□□□ 1.34
NME3-202ENST00000561637 DNAJC13O75165 2243 aa23.39■■□□□ 1.34
NME3-202ENST00000561637 A0A1B0GTH9 108 aa23.39■■□□□ 1.33
NME3-202ENST00000561637 EXOC1LA0A1B0GW35 172 aa23.39■■□□□ 1.33
NME3-202ENST00000561637 A8MT66 165 aa23.39■■□□□ 1.33
NME3-202ENST00000561637 FAM166BA8MTA8 275 aa23.39■■□□□ 1.33
NME3-202ENST00000561637 STX16-NPEPL1H3BU86 382 aa23.39■■□□□ 1.33
NME3-202ENST00000561637 STX16O14662 325 aa23.39■■□□□ 1.33
NME3-202ENST00000561637 ADAM10O14672 748 aa23.39■■□□□ 1.33
NME3-202ENST00000561637 CDC40O60508 579 aaKnown RBP eCLIP23.39■■□□□ 1.33
NME3-202ENST00000561637 PDE9AO76083 593 aa23.39■■□□□ 1.33
NME3-202ENST00000561637 CLDN14O95500 239 aa23.39■■□□□ 1.33
NME3-202ENST00000561637 MLYCDO95822 493 aa23.39■■□□□ 1.33
NME3-202ENST00000561637 RPS17P08708 135 aaKnown RBP23.39■■□□□ 1.33
NME3-202ENST00000561637 FAM58BPP0C7Q3 252 aa23.39■■□□□ 1.33
NME3-202ENST00000561637 ESRRAP11474 423 aaPredicted RBP23.39■■□□□ 1.33
NME3-202ENST00000561637 CASP6P55212 293 aa23.39■■□□□ 1.33
NME3-202ENST00000561637 CDH13P55290 713 aa23.39■■□□□ 1.33
NME3-202ENST00000561637 TLE4Q04727 773 aa23.39■■□□□ 1.33
NME3-202ENST00000561637 ASPHQ12797 758 aa23.39■■□□□ 1.33
NME3-202ENST00000561637 CUL3Q13618 768 aa23.39■■□□□ 1.33
NME3-202ENST00000561637 TAOK1Q7L7X3 1001 aa23.39■■□□□ 1.33
NME3-202ENST00000561637 REPS1Q96D71 796 aa23.39■■□□□ 1.33
NME3-202ENST00000561637 CENPKQ9BS16 269 aa23.39■■□□□ 1.33
NME3-202ENST00000561637 MEMO1Q9Y316 297 aa23.39■■□□□ 1.33
NME3-202ENST00000561637 KLRC4-KLRK1H3BQV0 150 aa23.38■■□□□ 1.33
NME3-202ENST00000561637 FOXE1O00358 373 aaPredicted RBP23.38■■□□□ 1.33
NME3-202ENST00000561637 PGRMC2O15173 223 aa23.38■■□□□ 1.33
NME3-202ENST00000561637 SMIM24O75264 130 aa23.38■■□□□ 1.33
NME3-202ENST00000561637 TUBB4AP04350 444 aa23.38■■□□□ 1.33
NME3-202ENST00000561637 RHOXF2BP0C7M4 288 aa23.38■■□□□ 1.33
NME3-202ENST00000561637 NR2F6P10588 404 aa23.38■■□□□ 1.33
NME3-202ENST00000561637 ALOX15P16050 662 aaPredicted RBP23.38■■□□□ 1.33
NME3-202ENST00000561637 SMSP52788 366 aa23.38■■□□□ 1.33
NME3-202ENST00000561637 HERVK_113P63132 956 aa23.38■■□□□ 1.33
NME3-202ENST00000561637 ERVK-8P63133 956 aa23.38■■□□□ 1.33
NME3-202ENST00000561637 PHEXP78562 749 aa23.38■■□□□ 1.33
NME3-202ENST00000561637 TSNAXIP1Q2TAA8 658 aa23.38■■□□□ 1.33
NME3-202ENST00000561637 LETMD1Q6P1Q0 360 aa23.38■■□□□ 1.33
NME3-202ENST00000561637 POGLUT1Q8NBL1 392 aa23.38■■□□□ 1.33
NME3-202ENST00000561637 OR2M7Q8NG81 312 aa23.38■■□□□ 1.33
NME3-202ENST00000561637 OR4F6Q8NGB9 312 aa23.38■■□□□ 1.33
NME3-202ENST00000561637 C16orf52Q8NHV5 167 aa23.38■■□□□ 1.33
NME3-202ENST00000561637 ZNF483Q8TF39 744 aaPredicted RBP23.38■■□□□ 1.33
NME3-202ENST00000561637 TANKQ92844 425 aa23.38■■□□□ 1.33
NME3-202ENST00000561637 MRPL57Q9BQC6 102 aaKnown RBP23.38■■□□□ 1.33
NME3-202ENST00000561637 RHOXF2Q9BQY4 288 aa23.38■■□□□ 1.33
NME3-202ENST00000561637 CNPPD1Q9BV87 410 aa23.38■■□□□ 1.33
NME3-202ENST00000561637 ERVK-6Q9BXR3 956 aa23.38■■□□□ 1.33
NME3-202ENST00000561637 MRPL1Q9BYD6 325 aaKnown RBP23.38■■□□□ 1.33
NME3-202ENST00000561637 DEFB127Q9H1M4 99 aa23.38■■□□□ 1.33
NME3-202ENST00000561637 MRPL46Q9H2W6 279 aaKnown RBP23.38■■□□□ 1.33
NME3-202ENST00000561637 LYARQ9NX58 379 aaKnown RBP23.38■■□□□ 1.33
NME3-202ENST00000561637 ERVK-19Q9WJR5 959 aa23.38■■□□□ 1.33
NME3-202ENST00000561637 NADKO95544 446 aaPredicted RBP23.37■■□□□ 1.33
NME3-202ENST00000561637 CLPSP04118 112 aa23.37■■□□□ 1.33
NME3-202ENST00000561637 CCL3P10147 92 aa23.37■■□□□ 1.33
NME3-202ENST00000561637 PLIN5Q00G26 463 aa23.37■■□□□ 1.33
NME3-202ENST00000561637 FRG2Q64ET8 278 aa23.37■■□□□ 1.33
NME3-202ENST00000561637 METTL2BQ6P1Q9 378 aaKnown RBP23.37■■□□□ 1.33
NME3-202ENST00000561637 CYP20A1Q6UW02 462 aa23.37■■□□□ 1.33
NME3-202ENST00000561637 NUDT13Q86X67 352 aa23.37■■□□□ 1.33
NME3-202ENST00000561637 MMP21Q8N119 569 aa23.37■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms