RNA–Protein interactions for RNA: ENST00000561391.1

SPG11-225, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 629 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-225ENST00000561391 LOC105369274A0A096LPK9 316 aa3.04□□□□□ -1.92
SPG11-225ENST00000561391 LOC102723532A0A0G2JNH3 316 aa3.04□□□□□ -1.92
SPG11-225ENST00000561391 TMEM120BA0PK00 339 aa3.04□□□□□ -1.92
SPG11-225ENST00000561391 SDR42E2A6NKP2 422 aa3.04□□□□□ -1.92
SPG11-225ENST00000561391 B9A039 149 aa3.04□□□□□ -1.92
SPG11-225ENST00000561391 HHLA1C9JL84 531 aa3.04□□□□□ -1.92
SPG11-225ENST00000561391 SOCS6O14544 535 aa3.04□□□□□ -1.92
SPG11-225ENST00000561391 TP73O15350 636 aa3.04□□□□□ -1.92
SPG11-225ENST00000561391 IRAK2O43187 625 aa3.04□□□□□ -1.92
SPG11-225ENST00000561391 ZNHIT1O43257 154 aa3.04□□□□□ -1.92
SPG11-225ENST00000561391 SLC19A2O60779 497 aa3.04□□□□□ -1.92
SPG11-225ENST00000561391 HNRNPCL1O60812 293 aaKnown RBP3.04□□□□□ -1.92
SPG11-225ENST00000561391 DAB1O75553 588 aa3.04□□□□□ -1.92
SPG11-225ENST00000561391 WISP2O76076 250 aa3.04□□□□□ -1.92
SPG11-225ENST00000561391 CALCAP01258 141 aa3.04□□□□□ -1.92
SPG11-225ENST00000561391 SHBGP04278 402 aa3.04□□□□□ -1.92
SPG11-225ENST00000561391 TPOP07202 933 aa3.04□□□□□ -1.92
SPG11-225ENST00000561391 GSTA1P08263 222 aa3.04□□□□□ -1.92
SPG11-225ENST00000561391 VIMP08670 466 aaKnown RBP3.04□□□□□ -1.92
SPG11-225ENST00000561391 SNRPAP09012 282 aaKnown RBP3.04□□□□□ -1.92
SPG11-225ENST00000561391 HOXD4P09016 255 aaPredicted RBP3.04□□□□□ -1.92
SPG11-225ENST00000561391 ADRB3P13945 408 aa3.04□□□□□ -1.92
SPG11-225ENST00000561391 CHN1P15882 459 aa3.04□□□□□ -1.92
SPG11-225ENST00000561391 IGFBP2P18065 325 aa3.04□□□□□ -1.92
SPG11-225ENST00000561391 TPSB2P20231 275 aa3.04□□□□□ -1.92
SPG11-225ENST00000561391 MATN1P21941 496 aa3.04□□□□□ -1.92
SPG11-225ENST00000561391 IL4RP24394 825 aa3.04□□□□□ -1.92
SPG11-225ENST00000561391 KRTAP5-9P26371 169 aa3.04□□□□□ -1.92
SPG11-225ENST00000561391 DUSP1P28562 367 aa3.04□□□□□ -1.92
SPG11-225ENST00000561391 SERPINA4P29622 427 aa3.04□□□□□ -1.92
SPG11-225ENST00000561391 OTX2P32243 289 aa3.04□□□□□ -1.92
SPG11-225ENST00000561391 ARCN1P48444 511 aaKnown RBP3.04□□□□□ -1.92
SPG11-225ENST00000561391 CCT5P48643 541 aa3.04□□□□□ -1.92
SPG11-225ENST00000561391 POLD2P49005 469 aa3.04□□□□□ -1.92
SPG11-225ENST00000561391 NPY2RP49146 381 aa3.04□□□□□ -1.92
SPG11-225ENST00000561391 RGS7P49802 495 aa3.04□□□□□ -1.92
SPG11-225ENST00000561391 RASSF2P50749 326 aa3.04□□□□□ -1.92
SPG11-225ENST00000561391 TKTL1P51854 596 aa3.04□□□□□ -1.92
SPG11-225ENST00000561391 NDST2P52849 883 aa3.04□□□□□ -1.92
SPG11-225ENST00000561391 FAM3BP58499 235 aaPredicted RBP3.04□□□□□ -1.92
SPG11-225ENST00000561391 YWHAGP61981 247 aaKnown RBP eCLIP3.04□□□□□ -1.92
SPG11-225ENST00000561391 DYNLT1P63172 113 aa3.04□□□□□ -1.92
SPG11-225ENST00000561391 TUBA4AP68366 448 aa3.04□□□□□ -1.92
SPG11-225ENST00000561391 IFI35P80217 286 aaPredicted RBP3.04□□□□□ -1.92
SPG11-225ENST00000561391 PDE1BQ01064 536 aa3.04□□□□□ -1.92
SPG11-225ENST00000561391 RBPJQ06330 500 aa3.04□□□□□ -1.92
SPG11-225ENST00000561391 LAMB3Q13751 1172 aa3.04□□□□□ -1.92
SPG11-225ENST00000561391 FRG1Q14331 258 aaKnown RBP3.04□□□□□ -1.92
SPG11-225ENST00000561391 NFATC4Q14934 902 aa3.04□□□□□ -1.92
SPG11-225ENST00000561391 LARS2Q15031 903 aaKnown RBP3.04□□□□□ -1.92
SPG11-225ENST00000561391 PAFAH1B3Q15102 231 aaKnown RBP3.04□□□□□ -1.92
SPG11-225ENST00000561391 TRIP13Q15645 432 aaPredicted RBP3.04□□□□□ -1.92
SPG11-225ENST00000561391 TPSAB1Q15661 275 aa3.04□□□□□ -1.92
SPG11-225ENST00000561391 C4orf46Q504U0 113 aa3.04□□□□□ -1.92
SPG11-225ENST00000561391 PPP6R3Q5H9R7 873 aaPredicted RBP3.04□□□□□ -1.92
SPG11-225ENST00000561391 RAB41Q5JT25 222 aa3.04□□□□□ -1.92
SPG11-225ENST00000561391 Q5PR19 223 aa3.04□□□□□ -1.92
SPG11-225ENST00000561391 BRMS1LQ5PSV4 323 aa3.04□□□□□ -1.92
SPG11-225ENST00000561391 MPP7Q5T2T1 576 aa3.04□□□□□ -1.92
SPG11-225ENST00000561391 HHATQ5VTY9 493 aa3.04□□□□□ -1.92
SPG11-225ENST00000561391 ZNF324BQ6AW86 544 aaPredicted RBP3.04□□□□□ -1.92
SPG11-225ENST00000561391 ITPRIPL1Q6GPH6 555 aa3.04□□□□□ -1.92
SPG11-225ENST00000561391 PM20D1Q6GTS8 502 aa3.04□□□□□ -1.92
SPG11-225ENST00000561391 KRTAP5-1Q6L8H4 278 aa3.04□□□□□ -1.92
SPG11-225ENST00000561391 C12orf54Q6X4T0 127 aa3.04□□□□□ -1.92
SPG11-225ENST00000561391 C3P1Q6ZMU1 363 aa3.04□□□□□ -1.92
SPG11-225ENST00000561391 ZNF788Q6ZQV5 615 aa3.04□□□□□ -1.92
SPG11-225ENST00000561391 RFX8Q6ZV50 586 aa3.04□□□□□ -1.92
SPG11-225ENST00000561391 CCDC91Q7Z6B0 441 aa3.04□□□□□ -1.92
SPG11-225ENST00000561391 LINC00523Q86TU6 105 aa3.04□□□□□ -1.92
SPG11-225ENST00000561391 EXOC3L1Q86VI1 746 aa3.04□□□□□ -1.92
SPG11-225ENST00000561391 LCA5Q86VQ0 697 aa3.04□□□□□ -1.92
SPG11-225ENST00000561391 SLC26A11Q86WA9 606 aa3.04□□□□□ -1.92
SPG11-225ENST00000561391 LRRC6Q86X45 466 aa3.04□□□□□ -1.92
SPG11-225ENST00000561391 HIPK1Q86Z02 1210 aa3.04□□□□□ -1.92
SPG11-225ENST00000561391 ZBED8Q8IZ13 594 aa3.04□□□□□ -1.92
SPG11-225ENST00000561391 OR4N4Q8N0Y3 316 aa3.04□□□□□ -1.92
SPG11-225ENST00000561391 GALNT16Q8N428 558 aa3.04□□□□□ -1.92
SPG11-225ENST00000561391 EMC1Q8N766 993 aa3.04□□□□□ -1.92
SPG11-225ENST00000561391 ZNF557Q8N988 423 aaPredicted RBP3.04□□□□□ -1.92
SPG11-225ENST00000561391 NAT8LQ8N9F0 302 aa3.04□□□□□ -1.92
SPG11-225ENST00000561391 OR6Y1Q8NGX8 325 aa3.04□□□□□ -1.92
SPG11-225ENST00000561391 OR10G6Q8NH81 332 aa3.04□□□□□ -1.92
SPG11-225ENST00000561391 ZNF398Q8TD17 642 aa3.04□□□□□ -1.92
SPG11-225ENST00000561391 ACMSDQ8TDX5 336 aa3.04□□□□□ -1.92
SPG11-225ENST00000561391 ZNF473Q8WTR7 871 aaKnown RBP3.04□□□□□ -1.92
SPG11-225ENST00000561391 CLEC4CQ8WTT0 213 aa3.04□□□□□ -1.92
SPG11-225ENST00000561391 RNF139Q8WU17 664 aa3.04□□□□□ -1.92
SPG11-225ENST00000561391 GLMPQ8WWB7 406 aa3.04□□□□□ -1.92
SPG11-225ENST00000561391 CKAP2Q8WWK9 683 aa3.04□□□□□ -1.92
SPG11-225ENST00000561391 OR1E3Q8WZA6 343 aa3.04□□□□□ -1.92
SPG11-225ENST00000561391 NR4A3Q92570 626 aa3.04□□□□□ -1.92
SPG11-225ENST00000561391 FAM149B1Q96BN6 582 aa3.04□□□□□ -1.92
SPG11-225ENST00000561391 PDXPQ96GD0 296 aa3.04□□□□□ -1.92
SPG11-225ENST00000561391 AGAP3Q96P47 875 aa3.04□□□□□ -1.92
SPG11-225ENST00000561391 GBP5Q96PP8 586 aa3.04□□□□□ -1.92
SPG11-225ENST00000561391 CSPG4P5Q96PW8 444 aa3.04□□□□□ -1.92
SPG11-225ENST00000561391 TAAR6Q96RI8 345 aa3.04□□□□□ -1.92
SPG11-225ENST00000561391 NPY6RQ99463 290 aa3.04□□□□□ -1.92
SPG11-225ENST00000561391 SELENOSQ9BQE4 189 aa3.04□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms