RNA–Protein interactions for RNA: ENST00000560620.1

CTDSPL2-209, Transcript of CTD small phosphatase like 2, humanhuman

TSL 3

Gene CTDSPL2, Length 863 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-209ENST00000560620 ROPN1BQ9BZX4 212 aaPredicted RBP12.07□□□□□ -0.48
CTDSPL2-209ENST00000560620 GSTO2Q9H4Y5 243 aa12.07□□□□□ -0.48
CTDSPL2-209ENST00000560620 ROPN1Q9HAT0 212 aaPredicted RBP12.07□□□□□ -0.48
CTDSPL2-209ENST00000560620 ADAM29Q9UKF5 820 aa12.07□□□□□ -0.48
CTDSPL2-209ENST00000560620 PPIEQ9UNP9 301 aaKnown RBP12.07□□□□□ -0.48
CTDSPL2-209ENST00000560620 YARS2Q9Y2Z4 477 aaKnown RBP12.07□□□□□ -0.48
CTDSPL2-209ENST00000560620 RELNP78509 3460 aa12.07□□□□□ -0.48
CTDSPL2-209ENST00000560620 GNG14A0A1W2PPG7 69 aa12.06□□□□□ -0.48
CTDSPL2-209ENST00000560620 A8MVJ9 347 aa12.06□□□□□ -0.48
CTDSPL2-209ENST00000560620 PGRMC2O15173 223 aa12.06□□□□□ -0.48
CTDSPL2-209ENST00000560620 PRKNO60260 465 aaPredicted RBP12.06□□□□□ -0.48
CTDSPL2-209ENST00000560620 SPAG7O75391 227 aa12.06□□□□□ -0.48
CTDSPL2-209ENST00000560620 ERAL1O75616 437 aaKnown RBP12.06□□□□□ -0.48
CTDSPL2-209ENST00000560620 NEURL1O76050 574 aa12.06□□□□□ -0.48
CTDSPL2-209ENST00000560620 DDAH2O95865 285 aa12.06□□□□□ -0.48
CTDSPL2-209ENST00000560620 HSD3B1P14060 373 aa12.06□□□□□ -0.48
CTDSPL2-209ENST00000560620 HSD3B2P26439 372 aa12.06□□□□□ -0.48
CTDSPL2-209ENST00000560620 GPR143P51810 404 aa12.06□□□□□ -0.48
CTDSPL2-209ENST00000560620 NAA20P61599 178 aa12.06□□□□□ -0.48
CTDSPL2-209ENST00000560620 ERVK-8P63133 956 aa12.06□□□□□ -0.48
CTDSPL2-209ENST00000560620 RNF4P78317 190 aa12.06□□□□□ -0.48
CTDSPL2-209ENST00000560620 BTKQ06187 659 aa12.06□□□□□ -0.48
CTDSPL2-209ENST00000560620 SPDYAQ5MJ70 313 aa12.06□□□□□ -0.48
CTDSPL2-209ENST00000560620 IL20RBQ6UXL0 311 aa12.06□□□□□ -0.48
CTDSPL2-209ENST00000560620 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.06□□□□□ -0.48
CTDSPL2-209ENST00000560620 GBP7Q8N8V2 638 aaPredicted RBP12.06□□□□□ -0.48
CTDSPL2-209ENST00000560620 OR4K14Q8NGD5 310 aa12.06□□□□□ -0.48
CTDSPL2-209ENST00000560620 OR5L2Q8NGL0 311 aa12.06□□□□□ -0.48
CTDSPL2-209ENST00000560620 DNAJB8Q8NHS0 232 aa12.06□□□□□ -0.48
CTDSPL2-209ENST00000560620 AGAP11Q8TF27 550 aa12.06□□□□□ -0.48
CTDSPL2-209ENST00000560620 RIT1Q92963 219 aa12.06□□□□□ -0.48
CTDSPL2-209ENST00000560620 UCN3Q969E3 161 aa12.06□□□□□ -0.48
CTDSPL2-209ENST00000560620 SENP5Q96HI0 755 aaPredicted RBP12.06□□□□□ -0.48
CTDSPL2-209ENST00000560620 APOPT1Q96IL0 206 aa12.06□□□□□ -0.48
CTDSPL2-209ENST00000560620 SMC6Q96SB8 1091 aa12.06□□□□□ -0.48
CTDSPL2-209ENST00000560620 BARD1Q99728 777 aaKnown RBP12.06□□□□□ -0.48
CTDSPL2-209ENST00000560620 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.06□□□□□ -0.48
CTDSPL2-209ENST00000560620 HPF1Q9NWY4 346 aa12.06□□□□□ -0.48
CTDSPL2-209ENST00000560620 MYOTQ9UBF9 498 aa12.06□□□□□ -0.48
CTDSPL2-209ENST00000560620 ERVK-19Q9WJR5 959 aa12.06□□□□□ -0.48
CTDSPL2-209ENST00000560620 OSGIN2Q9Y236 505 aa12.06□□□□□ -0.48
CTDSPL2-209ENST00000560620 PCDHGB6Q9Y5F9 930 aa12.06□□□□□ -0.48
CTDSPL2-209ENST00000560620 GOLGA6L10A6NI86 522 aa12.05□□□□□ -0.48
CTDSPL2-209ENST00000560620 CDK2AP1O14519 115 aa12.05□□□□□ -0.48
CTDSPL2-209ENST00000560620 SEMA7AO75326 666 aa12.05□□□□□ -0.48
CTDSPL2-209ENST00000560620 UNC5CO95185 931 aa12.05□□□□□ -0.48
CTDSPL2-209ENST00000560620 CHN1P15882 459 aa12.05□□□□□ -0.48
CTDSPL2-209ENST00000560620 TRHRP34981 398 aaPredicted RBP12.05□□□□□ -0.48
CTDSPL2-209ENST00000560620 HTR6P50406 440 aa12.05□□□□□ -0.48
CTDSPL2-209ENST00000560620 HK2P52789 917 aa12.05□□□□□ -0.48
CTDSPL2-209ENST00000560620 DNAJB13P59910 316 aa12.05□□□□□ -0.48
CTDSPL2-209ENST00000560620 IGLV3-21P80748 117 aaPredicted RBP12.05□□□□□ -0.48
CTDSPL2-209ENST00000560620 HMGCS1Q01581 520 aa12.05□□□□□ -0.48
CTDSPL2-209ENST00000560620 ALDH6A1Q02252 535 aaKnown RBP12.05□□□□□ -0.48
CTDSPL2-209ENST00000560620 SLC18A2Q05940 514 aa12.05□□□□□ -0.48
CTDSPL2-209ENST00000560620 ACSM2AQ08AH3 577 aa12.05□□□□□ -0.48
CTDSPL2-209ENST00000560620 GALNT1Q10472 559 aaPredicted RBP12.05□□□□□ -0.48
CTDSPL2-209ENST00000560620 TBL3Q12788 808 aaKnown RBP12.05□□□□□ -0.48
CTDSPL2-209ENST00000560620 ASPHQ12797 758 aa12.05□□□□□ -0.48
CTDSPL2-209ENST00000560620 KRT71Q3SY84 523 aa12.05□□□□□ -0.48
CTDSPL2-209ENST00000560620 LIPMQ5VYY2 423 aa12.05□□□□□ -0.48
CTDSPL2-209ENST00000560620 ACSM2BQ68CK6 577 aa12.05□□□□□ -0.48
CTDSPL2-209ENST00000560620 GFRALQ6UXV0 394 aa12.05□□□□□ -0.48
CTDSPL2-209ENST00000560620 RNF111Q6ZNA4 994 aa12.05□□□□□ -0.48
CTDSPL2-209ENST00000560620 DGAT2L6Q6ZPD8 337 aa12.05□□□□□ -0.48
CTDSPL2-209ENST00000560620 FRMD7Q6ZUT3 714 aa12.05□□□□□ -0.48
CTDSPL2-209ENST00000560620 SLC29A4Q7RTT9 530 aa12.05□□□□□ -0.48
CTDSPL2-209ENST00000560620 TRABD2AQ86V40 505 aa12.05□□□□□ -0.48
CTDSPL2-209ENST00000560620 C10orf107Q8IVU9 208 aa12.05□□□□□ -0.48
CTDSPL2-209ENST00000560620 ZNF721Q8TF20 911 aa12.05□□□□□ -0.48
CTDSPL2-209ENST00000560620 SCMH1Q96GD3 660 aa12.05□□□□□ -0.48
CTDSPL2-209ENST00000560620 FBXL20Q96IG2 436 aa12.05□□□□□ -0.48
CTDSPL2-209ENST00000560620 GAL3ST4Q96RP7 486 aa12.05□□□□□ -0.48
CTDSPL2-209ENST00000560620 SLX1AQ9BQ83 275 aa12.05□□□□□ -0.48
CTDSPL2-209ENST00000560620 FAIM2Q9BWQ8 316 aa12.05□□□□□ -0.48
CTDSPL2-209ENST00000560620 ACPTQ9BZG2 426 aa12.05□□□□□ -0.48
CTDSPL2-209ENST00000560620 TSPAN10Q9H1Z9 355 aaPredicted RBP12.05□□□□□ -0.48
CTDSPL2-209ENST00000560620 CENPHQ9H3R5 247 aa12.05□□□□□ -0.48
CTDSPL2-209ENST00000560620 PFDN4Q9NQP4 134 aa12.05□□□□□ -0.48
CTDSPL2-209ENST00000560620 OXSMQ9NWU1 459 aa12.05□□□□□ -0.48
CTDSPL2-209ENST00000560620 SEC14L3Q9UDX4 400 aa12.05□□□□□ -0.48
CTDSPL2-209ENST00000560620 PSME2Q9UL46 239 aa12.05□□□□□ -0.48
CTDSPL2-209ENST00000560620 KLF13Q9Y2Y9 288 aaPredicted RBP12.05□□□□□ -0.48
CTDSPL2-209ENST00000560620 FIS1Q9Y3D6 152 aa12.05□□□□□ -0.48
CTDSPL2-209ENST00000560620 C1orf226A1L170 272 aa12.04□□□□□ -0.48
CTDSPL2-209ENST00000560620 H3BQF6 201 aa12.04□□□□□ -0.48
CTDSPL2-209ENST00000560620 KLRC4-KLRK1H3BQV0 150 aa12.04□□□□□ -0.48
CTDSPL2-209ENST00000560620 HRKO00198 91 aa12.04□□□□□ -0.48
CTDSPL2-209ENST00000560620 UBFD1O14562 309 aaKnown RBP12.04□□□□□ -0.48
CTDSPL2-209ENST00000560620 PCDH7O60245 1069 aa12.04□□□□□ -0.48
CTDSPL2-209ENST00000560620 NME2P1O60361 137 aa12.04□□□□□ -0.48
CTDSPL2-209ENST00000560620 SLC35E2P0CK97 266 aa12.04□□□□□ -0.48
CTDSPL2-209ENST00000560620 NT5EP21589 574 aa12.04□□□□□ -0.48
CTDSPL2-209ENST00000560620 NME2P22392 152 aa12.04□□□□□ -0.48
CTDSPL2-209ENST00000560620 SOX3P41225 446 aa12.04□□□□□ -0.48
CTDSPL2-209ENST00000560620 XKP51811 444 aa12.04□□□□□ -0.48
CTDSPL2-209ENST00000560620 FOXA1P55317 472 aa12.04□□□□□ -0.48
CTDSPL2-209ENST00000560620 KCNK10P57789 538 aa12.04□□□□□ -0.48
CTDSPL2-209ENST00000560620 RBPJQ06330 500 aa12.04□□□□□ -0.48
CTDSPL2-209ENST00000560620 SRSF1Q07955 248 aaKnown RBP eCLIP12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms