RNA–Protein interactions for RNA: ENST00000560297.5

USP8-209, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 5

Gene USP8, Length 652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-209ENST00000560297 STT3AP46977 705 aa11.49□□□□□ -0.57
USP8-209ENST00000560297 MRPL19P49406 292 aaKnown RBP11.49□□□□□ -0.57
USP8-209ENST00000560297 EFNA3P52797 238 aa11.49□□□□□ -0.57
USP8-209ENST00000560297 CLNS1AP54105 237 aaKnown RBP11.49□□□□□ -0.57
USP8-209ENST00000560297 STX1BP61266 288 aa11.49□□□□□ -0.57
USP8-209ENST00000560297 PLIN5Q00G26 463 aa11.49□□□□□ -0.57
USP8-209ENST00000560297 SRSF11Q05519 484 aaKnown RBP11.49□□□□□ -0.57
USP8-209ENST00000560297 VAC14Q08AM6 782 aa11.49□□□□□ -0.57
USP8-209ENST00000560297 IL10RAQ13651 578 aa11.49□□□□□ -0.57
USP8-209ENST00000560297 PDE7AQ13946 482 aa11.49□□□□□ -0.57
USP8-209ENST00000560297 PTGR1Q14914 329 aa11.49□□□□□ -0.57
USP8-209ENST00000560297 TERF2Q15554 542 aa11.49□□□□□ -0.57
USP8-209ENST00000560297 ELAVL1Q15717 326 aaKnown RBP11.49□□□□□ -0.57
USP8-209ENST00000560297 PDCD4Q53EL6 469 aaKnown RBP11.49□□□□□ -0.57
USP8-209ENST00000560297 SFT2D3Q587I9 215 aa11.49□□□□□ -0.57
USP8-209ENST00000560297 CPTPQ5TA50 214 aa11.49□□□□□ -0.57
USP8-209ENST00000560297 TMEM198Q66K66 360 aa11.49□□□□□ -0.57
USP8-209ENST00000560297 INO80CQ6PI98 192 aaPredicted RBP11.49□□□□□ -0.57
USP8-209ENST00000560297 RIPOR1Q6ZS17 1223 aa11.49□□□□□ -0.57
USP8-209ENST00000560297 NDUFAF7Q7L592 441 aa11.49□□□□□ -0.57
USP8-209ENST00000560297 SPATA21Q7Z572 469 aa11.49□□□□□ -0.57
USP8-209ENST00000560297 PPP1R32Q7Z5V6 425 aa11.49□□□□□ -0.57
USP8-209ENST00000560297 MRGPREQ86SM8 312 aa11.49□□□□□ -0.57
USP8-209ENST00000560297 TMEM151BQ8IW70 566 aa11.49□□□□□ -0.57
USP8-209ENST00000560297 ST13P4Q8IZP2 240 aaPredicted RBP11.49□□□□□ -0.57
USP8-209ENST00000560297 MMP21Q8N119 569 aa11.49□□□□□ -0.57
USP8-209ENST00000560297 MIER2Q8N344 545 aa11.49□□□□□ -0.57
USP8-209ENST00000560297 TMEM102Q8N9M5 508 aaPredicted RBP11.49□□□□□ -0.57
USP8-209ENST00000560297 GLB1L3Q8NCI6 653 aaPredicted RBP11.49□□□□□ -0.57
USP8-209ENST00000560297 OR11G2Q8NGC1 345 aa11.49□□□□□ -0.57
USP8-209ENST00000560297 CLHC1Q8NHS4 586 aa11.49□□□□□ -0.57
USP8-209ENST00000560297 DAZLQ92904 295 aaKnown RBP11.49□□□□□ -0.57
USP8-209ENST00000560297 GFM2Q969S9 779 aaKnown RBP11.49□□□□□ -0.57
USP8-209ENST00000560297 TESCQ96BS2 214 aa11.49□□□□□ -0.57
USP8-209ENST00000560297 KLHL29Q96CT2 875 aa11.49□□□□□ -0.57
USP8-209ENST00000560297 COQ8BQ96D53 544 aa11.49□□□□□ -0.57
USP8-209ENST00000560297 FER1L6-AS2Q96M78 137 aa11.49□□□□□ -0.57
USP8-209ENST00000560297 DGAT2Q96PD7 388 aa11.49□□□□□ -0.57
USP8-209ENST00000560297 LPAR4Q99677 370 aa11.49□□□□□ -0.57
USP8-209ENST00000560297 ELAC2Q9BQ52 826 aaKnown RBP11.49□□□□□ -0.57
USP8-209ENST00000560297 RABEP2Q9H5N1 569 aa11.49□□□□□ -0.57
USP8-209ENST00000560297 ADAP2Q9NPF8 381 aa11.49□□□□□ -0.57
USP8-209ENST00000560297 SDR39U1Q9NRG7 319 aaPredicted RBP11.49□□□□□ -0.57
USP8-209ENST00000560297 PNO1Q9NRX1 252 aaKnown RBP11.49□□□□□ -0.57
USP8-209ENST00000560297 P4HTMQ9NXG6 502 aa11.49□□□□□ -0.57
USP8-209ENST00000560297 ZIM2Q9NZV7 527 aa11.49□□□□□ -0.57
USP8-209ENST00000560297 SH3BP4Q9P0V3 963 aa11.49□□□□□ -0.57
USP8-209ENST00000560297 ENTPD4Q9Y227 616 aa11.49□□□□□ -0.57
USP8-209ENST00000560297 POLHQ9Y253 713 aa11.49□□□□□ -0.57
USP8-209ENST00000560297 CLCA3PQ9Y6N3 262 aa11.49□□□□□ -0.57
USP8-209ENST00000560297 FER1L5A0AVI2 2057 aa11.48□□□□□ -0.57
USP8-209ENST00000560297 IGHV1-45A0A0A0MS14 117 aa11.48□□□□□ -0.57
USP8-209ENST00000560297 TGFBR3LH3BV60 316 aa11.48□□□□□ -0.57
USP8-209ENST00000560297 ANKRD28O15084 1053 aa11.48□□□□□ -0.57
USP8-209ENST00000560297 OR10H2O60403 315 aa11.48□□□□□ -0.57
USP8-209ENST00000560297 SHOX2O60902 331 aaPredicted RBP11.48□□□□□ -0.57
USP8-209ENST00000560297 SLC22A3O75751 556 aa11.48□□□□□ -0.57
USP8-209ENST00000560297 HPP00738 406 aa11.48□□□□□ -0.57
USP8-209ENST00000560297 PRKAR1AP10644 381 aa11.48□□□□□ -0.57
USP8-209ENST00000560297 TNNI3P19429 210 aa11.48□□□□□ -0.57
USP8-209ENST00000560297 NCF2P19878 526 aaPredicted RBP11.48□□□□□ -0.57
USP8-209ENST00000560297 ITPKBP27987 946 aa11.48□□□□□ -0.57
USP8-209ENST00000560297 FEN1P39748 380 aaKnown RBP11.48□□□□□ -0.57
USP8-209ENST00000560297 ATP4BP51164 291 aa11.48□□□□□ -0.57
USP8-209ENST00000560297 RRADP55042 308 aa11.48□□□□□ -0.57
USP8-209ENST00000560297 AP2B1P63010 937 aa11.48□□□□□ -0.57
USP8-209ENST00000560297 ID2Q02363 134 aa11.48□□□□□ -0.57
USP8-209ENST00000560297 CDC20Q12834 499 aa11.48□□□□□ -0.57
USP8-209ENST00000560297 CEBPEQ15744 281 aa11.48□□□□□ -0.57
USP8-209ENST00000560297 DPY19L1Q2PZI1 675 aa11.48□□□□□ -0.57
USP8-209ENST00000560297 CPZQ66K79 652 aa11.48□□□□□ -0.57
USP8-209ENST00000560297 LANCL3Q6ZV70 420 aa11.48□□□□□ -0.57
USP8-209ENST00000560297 CAMKMTQ7Z624 323 aa11.48□□□□□ -0.57
USP8-209ENST00000560297 LRRC25Q8N386 305 aaPredicted RBP11.48□□□□□ -0.57
USP8-209ENST00000560297 KRTCAP2Q8N6L1 136 aa11.48□□□□□ -0.57
USP8-209ENST00000560297 SNRNP27Q8WVK2 155 aaKnown RBP11.48□□□□□ -0.57
USP8-209ENST00000560297 EXOSC8Q96B26 276 aaKnown RBP11.48□□□□□ -0.57
USP8-209ENST00000560297 C8orf44Q96CB5 159 aa11.48□□□□□ -0.57
USP8-209ENST00000560297 CNRIP1Q96F85 164 aaPredicted RBP11.48□□□□□ -0.57
USP8-209ENST00000560297 ZNF681Q96N22 645 aa11.48□□□□□ -0.57
USP8-209ENST00000560297 BBS4Q96RK4 519 aa11.48□□□□□ -0.57
USP8-209ENST00000560297 ZBTB18Q99592 522 aa11.48□□□□□ -0.57
USP8-209ENST00000560297 TUBB6Q9BUF5 446 aa11.48□□□□□ -0.57
USP8-209ENST00000560297 FAM107BQ9H098 131 aa11.48□□□□□ -0.57
USP8-209ENST00000560297 C5AR2Q9P296 337 aa11.48□□□□□ -0.57
USP8-209ENST00000560297 G3BP2Q9UN86 482 aaKnown RBP11.48□□□□□ -0.57
USP8-209ENST00000560297 FREM2Q5SZK8 3169 aa11.47□□□□□ -0.57
USP8-209ENST00000560297 NSG1A0A0A6YYJ2 146 aa11.47□□□□□ -0.57
USP8-209ENST00000560297 MYO1GB0I1T2 1018 aa11.47□□□□□ -0.57
USP8-209ENST00000560297 SNX3O60493 162 aa11.47□□□□□ -0.57
USP8-209ENST00000560297 ATP1B1P05026 303 aa11.47□□□□□ -0.57
USP8-209ENST00000560297 NTSP30990 170 aa11.47□□□□□ -0.57
USP8-209ENST00000560297 UFM1P61960 85 aa11.47□□□□□ -0.57
USP8-209ENST00000560297 ATP1A4Q13733 1029 aa11.47□□□□□ -0.57
USP8-209ENST00000560297 SQLEQ14534 574 aa11.47□□□□□ -0.57
USP8-209ENST00000560297 PCOLCEQ15113 449 aa11.47□□□□□ -0.57
USP8-209ENST00000560297 EXT1Q16394 746 aa11.47□□□□□ -0.57
USP8-209ENST00000560297 C6orf163Q5TEZ5 329 aa11.47□□□□□ -0.57
USP8-209ENST00000560297 PAPD4Q6PIY7 484 aaKnown RBP11.47□□□□□ -0.57
USP8-209ENST00000560297 PIGWQ7Z7B1 504 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms