RNA–Protein interactions for RNA: ENST00000560175.5

SMAD3-213, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 542 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-213ENST00000560175 MYL2P10916 166 aa12.27□□□□□ -0.45
SMAD3-213ENST00000560175 ALOX15P16050 662 aaPredicted RBP12.27□□□□□ -0.45
SMAD3-213ENST00000560175 NME2P22392 152 aa12.27□□□□□ -0.45
SMAD3-213ENST00000560175 MST1P26927 711 aa12.27□□□□□ -0.45
SMAD3-213ENST00000560175 ARL1P40616 181 aaPredicted RBP12.27□□□□□ -0.45
SMAD3-213ENST00000560175 HK2P52789 917 aa12.27□□□□□ -0.45
SMAD3-213ENST00000560175 TRA2BP62995 288 aaKnown RBP12.27□□□□□ -0.45
SMAD3-213ENST00000560175 RNF4P78317 190 aa12.27□□□□□ -0.45
SMAD3-213ENST00000560175 ID2Q02363 134 aa12.27□□□□□ -0.45
SMAD3-213ENST00000560175 MPEG1Q2M385 716 aa12.27□□□□□ -0.45
SMAD3-213ENST00000560175 TCHHL1Q5QJ38 904 aaPredicted RBP12.27□□□□□ -0.45
SMAD3-213ENST00000560175 NDUFAF5Q5TEU4 345 aa12.27□□□□□ -0.45
SMAD3-213ENST00000560175 GALNT18Q6P9A2 607 aa12.27□□□□□ -0.45
SMAD3-213ENST00000560175 FRMD7Q6ZUT3 714 aa12.27□□□□□ -0.45
SMAD3-213ENST00000560175 COMMD6Q7Z4G1 85 aa12.27□□□□□ -0.45
SMAD3-213ENST00000560175 GPALPP1Q8IXQ4 340 aa12.27□□□□□ -0.45
SMAD3-213ENST00000560175 BANPQ8N9N5 519 aa12.27□□□□□ -0.45
SMAD3-213ENST00000560175 NUBPLQ8TB37 319 aa12.27□□□□□ -0.45
SMAD3-213ENST00000560175 METTL6Q8TCB7 284 aa12.27□□□□□ -0.45
SMAD3-213ENST00000560175 FBXL20Q96IG2 436 aa12.27□□□□□ -0.45
SMAD3-213ENST00000560175 DGAT2Q96PD7 388 aa12.27□□□□□ -0.45
SMAD3-213ENST00000560175 HES7Q9BYE0 225 aa12.27□□□□□ -0.45
SMAD3-213ENST00000560175 PARD6BQ9BYG5 372 aa12.27□□□□□ -0.45
SMAD3-213ENST00000560175 WDR41Q9HAD4 459 aa12.27□□□□□ -0.45
SMAD3-213ENST00000560175 ANKRD10Q9NXR5 420 aa12.27□□□□□ -0.45
SMAD3-213ENST00000560175 MAP10Q9P2G4 905 aa12.27□□□□□ -0.45
SMAD3-213ENST00000560175 SLC12A4Q9UP95 1085 aa12.27□□□□□ -0.45
SMAD3-213ENST00000560175 PLLPQ9Y342 182 aa12.27□□□□□ -0.45
SMAD3-213ENST00000560175 DIDO1Q9BTC0 2240 aaKnown RBP12.26□□□□□ -0.45
SMAD3-213ENST00000560175 COPEO14579 308 aa12.26□□□□□ -0.45
SMAD3-213ENST00000560175 SLC25A12O75746 678 aa12.26□□□□□ -0.45
SMAD3-213ENST00000560175 WISP2O76076 250 aa12.26□□□□□ -0.45
SMAD3-213ENST00000560175 COX7A2P14406 83 aa12.26□□□□□ -0.45
SMAD3-213ENST00000560175 CPA3P15088 417 aa12.26□□□□□ -0.45
SMAD3-213ENST00000560175 CHN1P15882 459 aa12.26□□□□□ -0.45
SMAD3-213ENST00000560175 TNNI3P19429 210 aa12.26□□□□□ -0.45
SMAD3-213ENST00000560175 ST13P50502 369 aaKnown RBP12.26□□□□□ -0.45
SMAD3-213ENST00000560175 NAGLUP54802 743 aa12.26□□□□□ -0.45
SMAD3-213ENST00000560175 PLIN5Q00G26 463 aa12.26□□□□□ -0.45
SMAD3-213ENST00000560175 OC90Q02509 493 aaPredicted RBP12.26□□□□□ -0.45
SMAD3-213ENST00000560175 ERCC6LQ2NKX8 1250 aa12.26□□□□□ -0.45
SMAD3-213ENST00000560175 SGO1Q5FBB7 561 aa12.26□□□□□ -0.45
SMAD3-213ENST00000560175 PIGGQ5H8A4 983 aa12.26□□□□□ -0.45
SMAD3-213ENST00000560175 CCNYL2Q5T2Q4 361 aa12.26□□□□□ -0.45
SMAD3-213ENST00000560175 FAM219BQ5XKK7 198 aa12.26□□□□□ -0.45
SMAD3-213ENST00000560175 OR52E8Q6IFG1 317 aa12.26□□□□□ -0.45
SMAD3-213ENST00000560175 TRIM46Q7Z4K8 759 aa12.26□□□□□ -0.45
SMAD3-213ENST00000560175 GALNTL5Q7Z4T8 443 aa12.26□□□□□ -0.45
SMAD3-213ENST00000560175 SIAH3Q8IW03 269 aa12.26□□□□□ -0.45
SMAD3-213ENST00000560175 OR5L2Q8NGL0 311 aa12.26□□□□□ -0.45
SMAD3-213ENST00000560175 C16orf52Q8NHV5 167 aa12.26□□□□□ -0.45
SMAD3-213ENST00000560175 PRR7Q8TB68 274 aa12.26□□□□□ -0.45
SMAD3-213ENST00000560175 THAP3Q8WTV1 239 aaPredicted RBP12.26□□□□□ -0.45
SMAD3-213ENST00000560175 PPWD1Q96BP3 646 aaKnown RBP12.26□□□□□ -0.45
SMAD3-213ENST00000560175 ART5Q96L15 291 aa12.26□□□□□ -0.45
SMAD3-213ENST00000560175 FRMD6Q96NE9 622 aa12.26□□□□□ -0.45
SMAD3-213ENST00000560175 RASL10BQ96S79 203 aa12.26□□□□□ -0.45
SMAD3-213ENST00000560175 ACPTQ9BZG2 426 aa12.26□□□□□ -0.45
SMAD3-213ENST00000560175 OR8D2Q9GZM6 311 aa12.26□□□□□ -0.45
SMAD3-213ENST00000560175 C12orf65Q9H3J6 166 aaKnown RBP12.26□□□□□ -0.45
SMAD3-213ENST00000560175 CXorf21Q9HAI6 301 aa12.26□□□□□ -0.45
SMAD3-213ENST00000560175 PCDHA9Q9Y5H5 950 aa12.26□□□□□ -0.45
SMAD3-213ENST00000560175 UTP20O75691 2785 aaKnown RBP12.25□□□□□ -0.45
SMAD3-213ENST00000560175 MYO7BQ6PIF6 2116 aa12.25□□□□□ -0.45
SMAD3-213ENST00000560175 C1orf226A1L170 272 aa12.25□□□□□ -0.45
SMAD3-213ENST00000560175 GLOD5A6NK44 160 aa12.25□□□□□ -0.45
SMAD3-213ENST00000560175 SMIM23A6NLE4 172 aa12.25□□□□□ -0.45
SMAD3-213ENST00000560175 NPIPB8E9PQR5 432 aa12.25□□□□□ -0.45
SMAD3-213ENST00000560175 HRKO00198 91 aa12.25□□□□□ -0.45
SMAD3-213ENST00000560175 ZNF354AO60765 605 aaPredicted RBP12.25□□□□□ -0.45
SMAD3-213ENST00000560175 GUCY1B2O75343 617 aa12.25□□□□□ -0.45
SMAD3-213ENST00000560175 OR2J2O76002 312 aa12.25□□□□□ -0.45
SMAD3-213ENST00000560175 CLPSP04118 112 aa12.25□□□□□ -0.45
SMAD3-213ENST00000560175 S1PR1P21453 382 aa12.25□□□□□ -0.45
SMAD3-213ENST00000560175 SOX18P35713 384 aa12.25□□□□□ -0.45
SMAD3-213ENST00000560175 HTR6P50406 440 aa12.25□□□□□ -0.45
SMAD3-213ENST00000560175 SSR4P51571 173 aa12.25□□□□□ -0.45
SMAD3-213ENST00000560175 FOXA1P55317 472 aa12.25□□□□□ -0.45
SMAD3-213ENST00000560175 SLC37A1P57057 533 aa12.25□□□□□ -0.45
SMAD3-213ENST00000560175 RAE1P78406 368 aaKnown RBP12.25□□□□□ -0.45
SMAD3-213ENST00000560175 FUT7Q11130 342 aa12.25□□□□□ -0.45
SMAD3-213ENST00000560175 KRTCAP3Q53RY4 240 aa12.25□□□□□ -0.45
SMAD3-213ENST00000560175 LIPMQ5VYY2 423 aa12.25□□□□□ -0.45
SMAD3-213ENST00000560175 SLC48A1Q6P1K1 146 aa12.25□□□□□ -0.45
SMAD3-213ENST00000560175 C16orf47Q6ZP98 133 aaPredicted RBP12.25□□□□□ -0.45
SMAD3-213ENST00000560175 RNF165Q6ZSG1 346 aa12.25□□□□□ -0.45
SMAD3-213ENST00000560175 C4orf33Q8N1A6 199 aa12.25□□□□□ -0.45
SMAD3-213ENST00000560175 SLC15A4Q8N697 577 aa12.25□□□□□ -0.45
SMAD3-213ENST00000560175 C1orf52Q8N6N3 182 aaKnown RBP12.25□□□□□ -0.45
SMAD3-213ENST00000560175 OR4K14Q8NGD5 310 aa12.25□□□□□ -0.45
SMAD3-213ENST00000560175 C5orf34Q96MH7 638 aa12.25□□□□□ -0.45
SMAD3-213ENST00000560175 KLHL1Q9NR64 748 aa12.25□□□□□ -0.45
SMAD3-213ENST00000560175 MCM8Q9UJA3 840 aa12.25□□□□□ -0.45
SMAD3-213ENST00000560175 ERRFI1Q9UJM3 462 aaPredicted RBP12.25□□□□□ -0.45
SMAD3-213ENST00000560175 SLC5A6Q9Y289 635 aa12.25□□□□□ -0.45
SMAD3-213ENST00000560175 TIMM22Q9Y584 194 aa12.25□□□□□ -0.45
SMAD3-213ENST00000560175 A0A1W2PS29 197 aa12.24□□□□□ -0.45
SMAD3-213ENST00000560175 TLDC2A0PJX2 215 aa12.24□□□□□ -0.45
SMAD3-213ENST00000560175 CCDC151A5D8V7 595 aa12.24□□□□□ -0.45
SMAD3-213ENST00000560175 OR6C76A6NM76 312 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms