RNA–Protein interactions for RNA: ENST00000559754.1

SPG11-218, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 411 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-218ENST00000559754 GRAP2O75791 330 aa3.19□□□□□ -1.9
SPG11-218ENST00000559754 CHRNGP07510 517 aa3.19□□□□□ -1.9
SPG11-218ENST00000559754 ASNSP08243 561 aa3.19□□□□□ -1.9
SPG11-218ENST00000559754 RRASP10301 218 aa3.19□□□□□ -1.9
SPG11-218ENST00000559754 CLUP10909 449 aa3.19□□□□□ -1.9
SPG11-218ENST00000559754 JAK1P23458 1154 aa3.19□□□□□ -1.9
SPG11-218ENST00000559754 CASQ1P31415 396 aa3.19□□□□□ -1.9
SPG11-218ENST00000559754 TNFSF10P50591 281 aa3.19□□□□□ -1.9
SPG11-218ENST00000559754 PDX1P52945 283 aa3.19□□□□□ -1.9
SPG11-218ENST00000559754 VCPP55072 806 aaKnown RBP3.19□□□□□ -1.9
SPG11-218ENST00000559754 CX3CL1P78423 397 aa3.19□□□□□ -1.9
SPG11-218ENST00000559754 ZNF415Q09FC8 603 aa3.19□□□□□ -1.9
SPG11-218ENST00000559754 MSLNQ13421 630 aaPredicted RBP3.19□□□□□ -1.9
SPG11-218ENST00000559754 MXD4Q14582 209 aaPredicted RBP3.19□□□□□ -1.9
SPG11-218ENST00000559754 PDK4Q16654 411 aa3.19□□□□□ -1.9
SPG11-218ENST00000559754 ANKRD55Q3KP44 614 aa3.19□□□□□ -1.9
SPG11-218ENST00000559754 XKR6Q5GH73 641 aa3.19□□□□□ -1.9
SPG11-218ENST00000559754 ARMCX4Q5H9R4 360 aa3.19□□□□□ -1.9
SPG11-218ENST00000559754 C20orf194Q5TEA3 1177 aa3.19□□□□□ -1.9
SPG11-218ENST00000559754 NKAIN2Q5VXU1 208 aa3.19□□□□□ -1.9
SPG11-218ENST00000559754 TPGS2Q68CL5 300 aa3.19□□□□□ -1.9
SPG11-218ENST00000559754 NCR3LG1Q68D85 454 aa3.19□□□□□ -1.9
SPG11-218ENST00000559754 OR4A47Q6IF82 309 aa3.19□□□□□ -1.9
SPG11-218ENST00000559754 UGT3A1Q6NUS8 523 aa3.19□□□□□ -1.9
SPG11-218ENST00000559754 LRRC8BQ6P9F7 803 aa3.19□□□□□ -1.9
SPG11-218ENST00000559754 DOK6Q6PKX4 331 aa3.19□□□□□ -1.9
SPG11-218ENST00000559754 PRUNE1Q86TP1 453 aa3.19□□□□□ -1.9
SPG11-218ENST00000559754 MMD2Q8IY49 270 aa3.19□□□□□ -1.9
SPG11-218ENST00000559754 LGI2Q8N0V4 545 aa3.19□□□□□ -1.9
SPG11-218ENST00000559754 PRSS35Q8N3Z0 413 aa3.19□□□□□ -1.9
SPG11-218ENST00000559754 ZNF843Q8N446 348 aa3.19□□□□□ -1.9
SPG11-218ENST00000559754 TMEM99Q8N816 258 aa3.19□□□□□ -1.9
SPG11-218ENST00000559754 UBTD2Q8WUN7 234 aa3.19□□□□□ -1.9
SPG11-218ENST00000559754 NCLNQ969V3 563 aa3.19□□□□□ -1.9
SPG11-218ENST00000559754 TSACCQ96A04 125 aaPredicted RBP3.19□□□□□ -1.9
SPG11-218ENST00000559754 RFT1Q96AA3 541 aa3.19□□□□□ -1.9
SPG11-218ENST00000559754 TPD52L3Q96J77 140 aa3.19□□□□□ -1.9
SPG11-218ENST00000559754 FAM20AQ96MK3 541 aa3.19□□□□□ -1.9
SPG11-218ENST00000559754 PSKH2Q96QS6 385 aa3.19□□□□□ -1.9
SPG11-218ENST00000559754 PLIN2Q99541 437 aa3.19□□□□□ -1.9
SPG11-218ENST00000559754 NDNQ99608 321 aa3.19□□□□□ -1.9
SPG11-218ENST00000559754 CBWD1Q9BRT8 395 aa3.19□□□□□ -1.9
SPG11-218ENST00000559754 FUCA2Q9BTY2 467 aa3.19□□□□□ -1.9
SPG11-218ENST00000559754 CLEC7AQ9BXN2 247 aa3.19□□□□□ -1.9
SPG11-218ENST00000559754 MRPL13Q9BYD1 178 aaKnown RBP3.19□□□□□ -1.9
SPG11-218ENST00000559754 GCOM2Q9BZD3 368 aaPredicted RBP3.19□□□□□ -1.9
SPG11-218ENST00000559754 LAT2Q9GZY6 243 aa3.19□□□□□ -1.9
SPG11-218ENST00000559754 ZMYND12Q9H0C1 365 aa3.19□□□□□ -1.9
SPG11-218ENST00000559754 VCX2Q9H322 139 aa3.19□□□□□ -1.9
SPG11-218ENST00000559754 RIMS4Q9H426 269 aaPredicted RBP3.19□□□□□ -1.9
SPG11-218ENST00000559754 DCLRE1BQ9H816 532 aa3.19□□□□□ -1.9
SPG11-218ENST00000559754 MARCH7Q9H992 704 aa3.19□□□□□ -1.9
SPG11-218ENST00000559754 RBM28Q9NW13 759 aaKnown RBP3.19□□□□□ -1.9
SPG11-218ENST00000559754 RNF186Q9NXI6 227 aa3.19□□□□□ -1.9
SPG11-218ENST00000559754 COPS7AQ9UBW8 275 aa3.19□□□□□ -1.9
SPG11-218ENST00000559754 TEKT2Q9UIF3 430 aa3.19□□□□□ -1.9
SPG11-218ENST00000559754 ZDHHC2Q9UIJ5 367 aa3.19□□□□□ -1.9
SPG11-218ENST00000559754 SPACA6W5XKT8 324 aa3.19□□□□□ -1.9
SPG11-218ENST00000559754 ARID2Q68CP9 1835 aa3.19□□□□□ -1.9
SPG11-218ENST00000559754 ABCC4O15439 1325 aa3.19□□□□□ -1.9
SPG11-218ENST00000559754 KIF16BQ96L93 1317 aa3.19□□□□□ -1.9
SPG11-218ENST00000559754 A0A0U1RQV5 110 aa3.18□□□□□ -1.9
SPG11-218ENST00000559754 TMEM89A2RUT3 159 aa3.18□□□□□ -1.9
SPG11-218ENST00000559754 ZSCAN5BA6NJL1 495 aa3.18□□□□□ -1.9
SPG11-218ENST00000559754 K7EQM0 130 aa3.18□□□□□ -1.9
SPG11-218ENST00000559754 CLN5O75503 358 aa3.18□□□□□ -1.9
SPG11-218ENST00000559754 SURF6O75683 361 aaKnown RBP3.18□□□□□ -1.9
SPG11-218ENST00000559754 PROS1P07225 676 aa3.18□□□□□ -1.9
SPG11-218ENST00000559754 APRTP07741 180 aa3.18□□□□□ -1.9
SPG11-218ENST00000559754 IQCF3P0C7M6 154 aa3.18□□□□□ -1.9
SPG11-218ENST00000559754 GZMAP12544 262 aa3.18□□□□□ -1.9
SPG11-218ENST00000559754 RPA2P15927 270 aa3.18□□□□□ -1.9
SPG11-218ENST00000559754 CALB2P22676 271 aa3.18□□□□□ -1.9
SPG11-218ENST00000559754 IL4RP24394 825 aa3.18□□□□□ -1.9
SPG11-218ENST00000559754 DPP4P27487 766 aa3.18□□□□□ -1.9
SPG11-218ENST00000559754 FCGR2BP31994 310 aaPredicted RBP3.18□□□□□ -1.9
SPG11-218ENST00000559754 ADRA1AP35348 466 aa3.18□□□□□ -1.9
SPG11-218ENST00000559754 TAGLN2P37802 199 aaKnown RBP3.18□□□□□ -1.9
SPG11-218ENST00000559754 SLC6A8P48029 635 aa3.18□□□□□ -1.9
SPG11-218ENST00000559754 CCL11P51671 97 aa3.18□□□□□ -1.9
SPG11-218ENST00000559754 CLCN4P51793 760 aa3.18□□□□□ -1.9
SPG11-218ENST00000559754 MAZP56270 477 aaKnown RBP3.18□□□□□ -1.9
SPG11-218ENST00000559754 MYBPC1Q00872 1141 aa3.18□□□□□ -1.9
SPG11-218ENST00000559754 FUT7Q11130 342 aa3.18□□□□□ -1.9
SPG11-218ENST00000559754 ZNF239Q16600 458 aaKnown RBP3.18□□□□□ -1.9
SPG11-218ENST00000559754 ODF4Q2M2E3 257 aa3.18□□□□□ -1.9
SPG11-218ENST00000559754 USH1GQ495M9 461 aa3.18□□□□□ -1.9
SPG11-218ENST00000559754 WLSQ5T9L3 541 aa3.18□□□□□ -1.9
SPG11-218ENST00000559754 TTC27Q6P3X3 843 aa3.18□□□□□ -1.9
SPG11-218ENST00000559754 PIGZQ86VD9 579 aa3.18□□□□□ -1.9
SPG11-218ENST00000559754 GRAMD2AQ8IUY3 354 aa3.18□□□□□ -1.9
SPG11-218ENST00000559754 TDHQ8IZJ6 230 aa3.18□□□□□ -1.9
SPG11-218ENST00000559754 GCNT2Q8N0V5 402 aa3.18□□□□□ -1.9
SPG11-218ENST00000559754 LRRC17Q8N6Y2 441 aa3.18□□□□□ -1.9
SPG11-218ENST00000559754 ZNF607Q96SK3 696 aa3.18□□□□□ -1.9
SPG11-218ENST00000559754 SECISBP2Q96T21 854 aaKnown RBP3.18□□□□□ -1.9
SPG11-218ENST00000559754 KRT12Q99456 494 aa3.18□□□□□ -1.9
SPG11-218ENST00000559754 MAP3K3Q99759 626 aa3.18□□□□□ -1.9
SPG11-218ENST00000559754 CCDC77Q9BR77 488 aa3.18□□□□□ -1.9
SPG11-218ENST00000559754 ALKBH7Q9BT30 221 aaPredicted RBP3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms