RNA–Protein interactions for RNA: ENST00000558958.1

CLPX-203, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 1 (best)

Gene CLPX, Length 1,493 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-203ENST00000558958 C6orf47O95873 294 aa16.98■□□□□ 0.31
CLPX-203ENST00000558958 ALBP02768 609 aa16.98■□□□□ 0.31
CLPX-203ENST00000558958 ZGLP1P0C6A0 271 aa16.98■□□□□ 0.31
CLPX-203ENST00000558958 TRPC1P48995 793 aa16.98■□□□□ 0.31
CLPX-203ENST00000558958 MANFP55145 182 aaKnown RBP16.98■□□□□ 0.31
CLPX-203ENST00000558958 IGLV3-21P80748 117 aaPredicted RBP16.98■□□□□ 0.31
CLPX-203ENST00000558958 ID2Q02363 134 aa16.98■□□□□ 0.31
CLPX-203ENST00000558958 DUSP2Q05923 314 aa16.98■□□□□ 0.31
CLPX-203ENST00000558958 ART3Q13508 389 aa16.98■□□□□ 0.31
CLPX-203ENST00000558958 NFYCQ13952 458 aa16.98■□□□□ 0.31
CLPX-203ENST00000558958 MLC1Q15049 377 aa16.98■□□□□ 0.31
CLPX-203ENST00000558958 C6orf15Q6UXA7 325 aaPredicted RBP16.98■□□□□ 0.31
CLPX-203ENST00000558958 DLEU7Q6UYE1 221 aa16.98■□□□□ 0.31
CLPX-203ENST00000558958 HACD2Q6Y1H2 254 aa16.98■□□□□ 0.31
CLPX-203ENST00000558958 RINLQ6ZS11 566 aa16.98■□□□□ 0.31
CLPX-203ENST00000558958 RBM15BQ8NDT2 890 aaKnown RBP16.98■□□□□ 0.31
CLPX-203ENST00000558958 DNAJB8Q8NHS0 232 aa16.98■□□□□ 0.31
CLPX-203ENST00000558958 SUN3Q8TAQ9 357 aa16.98■□□□□ 0.31
CLPX-203ENST00000558958 OR5P2Q8WZ92 322 aa16.98■□□□□ 0.31
CLPX-203ENST00000558958 MR1Q95460 341 aa16.98■□□□□ 0.31
CLPX-203ENST00000558958 PANX1Q96RD7 426 aa16.98■□□□□ 0.31
CLPX-203ENST00000558958 CHST8Q9H2A9 424 aa16.98■□□□□ 0.31
CLPX-203ENST00000558958 GLIPR2Q9H4G4 154 aa16.98■□□□□ 0.31
CLPX-203ENST00000558958 C14orf105Q9NVL8 296 aa16.98■□□□□ 0.31
CLPX-203ENST00000558958 SCN2AQ99250 2005 aa16.97■□□□□ 0.31
CLPX-203ENST00000558958 A0A096LPI6 279 aa16.97■□□□□ 0.31
CLPX-203ENST00000558958 TGFBR3LH3BV60 316 aa16.97■□□□□ 0.31
CLPX-203ENST00000558958 RFXANKO14593 260 aa16.97■□□□□ 0.31
CLPX-203ENST00000558958 ERN1O75460 977 aaKnown RBP16.97■□□□□ 0.31
CLPX-203ENST00000558958 KCNH1O95259 989 aa16.97■□□□□ 0.31
CLPX-203ENST00000558958 CPSF4O95639 269 aaKnown RBP16.97■□□□□ 0.31
CLPX-203ENST00000558958 NPPAP01160 153 aa16.97■□□□□ 0.31
CLPX-203ENST00000558958 KRT16P08779 473 aa16.97■□□□□ 0.31
CLPX-203ENST00000558958 CPMP14384 443 aa16.97■□□□□ 0.31
CLPX-203ENST00000558958 PORP16435 677 aaPredicted RBP16.97■□□□□ 0.31
CLPX-203ENST00000558958 PTPN6P29350 595 aa16.97■□□□□ 0.31
CLPX-203ENST00000558958 MPIP34949 423 aa16.97■□□□□ 0.31
CLPX-203ENST00000558958 CPOXP36551 454 aa16.97■□□□□ 0.31
CLPX-203ENST00000558958 CDKN2CP42773 168 aa16.97■□□□□ 0.31
CLPX-203ENST00000558958 NCBP2P52298 156 aaKnown RBP eCLIP16.97■□□□□ 0.312e-12■■■□□ 17.9
CLPX-203ENST00000558958 HBA1P69905 142 aa16.97■□□□□ 0.31
CLPX-203ENST00000558958 MXRA7P84157 204 aa16.97■□□□□ 0.31
CLPX-203ENST00000558958 NKG7Q16617 165 aa16.97■□□□□ 0.31
CLPX-203ENST00000558958 TRMT5Q32P41 509 aaKnown RBP16.97■□□□□ 0.31
CLPX-203ENST00000558958 LRIF1Q5T3J3 769 aa16.97■□□□□ 0.31
CLPX-203ENST00000558958 MRPL14Q6P1L8 145 aaKnown RBP16.97■□□□□ 0.31
CLPX-203ENST00000558958 FAM199XQ6PEV8 388 aaPredicted RBP16.97■□□□□ 0.31
CLPX-203ENST00000558958 FAM198BQ6UWH4 519 aa16.97■□□□□ 0.31
CLPX-203ENST00000558958 QSOX2Q6ZRP7 698 aa16.97■□□□□ 0.31
CLPX-203ENST00000558958 ZNF551Q7Z340 670 aaPredicted RBP16.97■□□□□ 0.31
CLPX-203ENST00000558958 TIPARPQ7Z3E1 657 aaKnown RBP16.97■□□□□ 0.31
CLPX-203ENST00000558958 DHDDSQ86SQ9 333 aa16.97■□□□□ 0.31
CLPX-203ENST00000558958 CCDC116Q8IYX3 515 aa16.97■□□□□ 0.31
CLPX-203ENST00000558958 LRRC25Q8N386 305 aaPredicted RBP16.97■□□□□ 0.31
CLPX-203ENST00000558958 OR4A15Q8NGL6 344 aa16.97■□□□□ 0.31
CLPX-203ENST00000558958 GOT1L1Q8NHS2 421 aaPredicted RBP16.97■□□□□ 0.31
CLPX-203ENST00000558958 PAIP1Q9H074 479 aaKnown RBP16.97■□□□□ 0.31
CLPX-203ENST00000558958 C1orf21Q9H246 121 aa16.97■□□□□ 0.31
CLPX-203ENST00000558958 IL1RL2Q9HB29 575 aa16.97■□□□□ 0.31
CLPX-203ENST00000558958 GID8Q9NWU2 228 aa16.97■□□□□ 0.31
CLPX-203ENST00000558958 TAS2R9Q9NYW1 312 aa16.97■□□□□ 0.31
CLPX-203ENST00000558958 TAS2R1Q9NYW7 299 aa16.97■□□□□ 0.31
CLPX-203ENST00000558958 PADI1Q9ULC6 663 aa16.97■□□□□ 0.31
CLPX-203ENST00000558958 PCDHGB4Q9UN71 923 aa16.97■□□□□ 0.31
CLPX-203ENST00000558958 PCDHGA7Q9Y5G6 932 aa16.97■□□□□ 0.31
CLPX-203ENST00000558958 FXYD1O00168 92 aa16.96■□□□□ 0.31
CLPX-203ENST00000558958 CNOT3O75175 753 aaKnown RBP16.96■□□□□ 0.31
CLPX-203ENST00000558958 RECKO95980 971 aa16.96■□□□□ 0.31
CLPX-203ENST00000558958 HOXB9P17482 250 aaPredicted RBP16.96■□□□□ 0.31
CLPX-203ENST00000558958 MAOAP21397 527 aa16.96■□□□□ 0.31
CLPX-203ENST00000558958 SLC5A2P31639 672 aa16.96■□□□□ 0.31
CLPX-203ENST00000558958 RASSF2P50749 326 aa16.96■□□□□ 0.31
CLPX-203ENST00000558958 EFNA3P52797 238 aa16.96■□□□□ 0.31
CLPX-203ENST00000558958 NCALDP61601 193 aa16.96■□□□□ 0.31
CLPX-203ENST00000558958 SLC25A3Q00325 362 aa16.96■□□□□ 0.31
CLPX-203ENST00000558958 RHAGQ02094 409 aa16.96■□□□□ 0.31
CLPX-203ENST00000558958 STX4Q12846 297 aa16.96■□□□□ 0.31
CLPX-203ENST00000558958 MINDY4Q4G0A6 757 aa16.96■□□□□ 0.31
CLPX-203ENST00000558958 MFSD4BQ5TF39 518 aa16.96■□□□□ 0.31
CLPX-203ENST00000558958 MLIPQ5VWP3 458 aa16.96■□□□□ 0.31
CLPX-203ENST00000558958 CPZQ66K79 652 aa16.96■□□□□ 0.31
CLPX-203ENST00000558958 IGF2-ASQ6U949 168 aa16.96■□□□□ 0.31
CLPX-203ENST00000558958 LAPTM4BQ86VI4 370 aa16.96■□□□□ 0.31
CLPX-203ENST00000558958 PRSS58Q8IYP2 241 aa16.96■□□□□ 0.31
CLPX-203ENST00000558958 ZFP28Q8NHY6 868 aa16.96■□□□□ 0.31
CLPX-203ENST00000558958 LRRC58Q96CX6 371 aa16.96■□□□□ 0.31
CLPX-203ENST00000558958 PTCHD1Q96NR3 888 aa16.96■□□□□ 0.31
CLPX-203ENST00000558958 TRIM4Q9C037 500 aa16.96■□□□□ 0.31
CLPX-203ENST00000558958 VN1R1Q9GZP7 353 aa16.96■□□□□ 0.31
CLPX-203ENST00000558958 WDR54Q9H977 334 aa16.96■□□□□ 0.31
CLPX-203ENST00000558958 NECTIN3Q9NQS3 549 aa16.96■□□□□ 0.31
CLPX-203ENST00000558958 SLC6A13Q9NSD5 602 aa16.96■□□□□ 0.31
CLPX-203ENST00000558958 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.96■□□□□ 0.31
CLPX-203ENST00000558958 MKL2Q9ULH7 1088 aa16.96■□□□□ 0.31
CLPX-203ENST00000558958 IGKV3D-11A0A0A0MRZ8 115 aa16.95■□□□□ 0.3
CLPX-203ENST00000558958 TRBV5-3A0A0A0MS03 114 aa16.95■□□□□ 0.3
CLPX-203ENST00000558958 MYOCOSA0A1B0GUC4 107 aa16.95■□□□□ 0.3
CLPX-203ENST00000558958 C9J4A7 227 aa16.95■□□□□ 0.3
CLPX-203ENST00000558958 ATP1B1P05026 303 aa16.95■□□□□ 0.3
CLPX-203ENST00000558958 CCNYL3P0C7X3 344 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms