RNA–Protein interactions for RNA: ENST00000558561.1

SPG11-211, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-211ENST00000558561 C3orf62Q6ZUJ4 267 aa4.03□□□□□ -1.76
SPG11-211ENST00000558561 OTOAQ7RTW8 1153 aa4.03□□□□□ -1.76
SPG11-211ENST00000558561 PRSS41Q7RTY9 318 aa4.03□□□□□ -1.76
SPG11-211ENST00000558561 OOSP2Q86WS3 158 aa4.03□□□□□ -1.76
SPG11-211ENST00000558561 ZBED8Q8IZ13 594 aa4.03□□□□□ -1.76
SPG11-211ENST00000558561 ZNF843Q8N446 348 aa4.03□□□□□ -1.76
SPG11-211ENST00000558561 ZBTB2Q8N680 514 aa4.03□□□□□ -1.76
SPG11-211ENST00000558561 C11orf44Q8N8P7 122 aa4.03□□□□□ -1.76
SPG11-211ENST00000558561 ZNF740Q8NDX6 193 aa4.03□□□□□ -1.76
SPG11-211ENST00000558561 OR9A1PQ8NGU1 263 aa4.03□□□□□ -1.76
SPG11-211ENST00000558561 HEXDCQ8WVB3 486 aa4.03□□□□□ -1.76
SPG11-211ENST00000558561 SKA2Q8WVK7 121 aaPredicted RBP4.03□□□□□ -1.76
SPG11-211ENST00000558561 ZFPM2Q8WW38 1151 aa4.03□□□□□ -1.76
SPG11-211ENST00000558561 ASZ1Q8WWH4 475 aa4.03□□□□□ -1.76
SPG11-211ENST00000558561 INPP5DQ92835 1189 aa4.03□□□□□ -1.76
SPG11-211ENST00000558561 PEX13Q92968 403 aa4.03□□□□□ -1.76
SPG11-211ENST00000558561 TMEM159Q96B96 161 aa4.03□□□□□ -1.76
SPG11-211ENST00000558561 PYCR2Q96C36 320 aa4.03□□□□□ -1.76
SPG11-211ENST00000558561 CERS2Q96G23 380 aa4.03□□□□□ -1.76
SPG11-211ENST00000558561 SNF8Q96H20 258 aa4.03□□□□□ -1.76
SPG11-211ENST00000558561 PRAP1Q96NZ9 151 aa4.03□□□□□ -1.76
SPG11-211ENST00000558561 NAP1L3Q99457 506 aaPredicted RBP4.03□□□□□ -1.76
SPG11-211ENST00000558561 DUSP26Q9BV47 211 aa4.03□□□□□ -1.76
SPG11-211ENST00000558561 DDA1Q9BW61 102 aa4.03□□□□□ -1.76
SPG11-211ENST00000558561 PITPNM3Q9BZ71 974 aa4.03□□□□□ -1.76
SPG11-211ENST00000558561 ULBP3Q9BZM4 244 aa4.03□□□□□ -1.76
SPG11-211ENST00000558561 AICDAQ9GZX7 198 aa4.03□□□□□ -1.76
SPG11-211ENST00000558561 ZNF700Q9H0M5 742 aa4.03□□□□□ -1.76
SPG11-211ENST00000558561 KLK15Q9H2R5 256 aa4.03□□□□□ -1.76
SPG11-211ENST00000558561 PRDM13Q9H4Q3 707 aa4.03□□□□□ -1.76
SPG11-211ENST00000558561 ZBTB20Q9HC78 741 aaPredicted RBP4.03□□□□□ -1.76
SPG11-211ENST00000558561 XAB2Q9HCS7 855 aaKnown RBP4.03□□□□□ -1.76
SPG11-211ENST00000558561 PPANQ9NQ55 473 aaKnown RBP4.03□□□□□ -1.76
SPG11-211ENST00000558561 LHX9Q9NQ69 397 aa4.03□□□□□ -1.76
SPG11-211ENST00000558561 ZNF71Q9NQZ8 489 aaPredicted RBP4.03□□□□□ -1.76
SPG11-211ENST00000558561 ZDHHC18Q9NUE0 388 aa4.03□□□□□ -1.76
SPG11-211ENST00000558561 ASB6Q9NWX5 421 aa4.03□□□□□ -1.76
SPG11-211ENST00000558561 LNPEPQ9UIQ6 1025 aa4.03□□□□□ -1.76
SPG11-211ENST00000558561 RARRES3Q9UL19 164 aa4.03□□□□□ -1.76
SPG11-211ENST00000558561 USP22Q9UPT9 525 aa4.03□□□□□ -1.76
SPG11-211ENST00000558561 PDE10AQ9Y233 779 aa4.03□□□□□ -1.76
SPG11-211ENST00000558561 BTRCQ9Y297 605 aa4.03□□□□□ -1.76
SPG11-211ENST00000558561 MAU2Q9Y6X3 613 aa4.03□□□□□ -1.76
SPG11-211ENST00000558561 FAM208BQ5VWN6 2430 aa4.03□□□□□ -1.76
SPG11-211ENST00000558561 EML6Q6ZMW3 1958 aa4.02□□□□□ -1.77
SPG11-211ENST00000558561 A0A0J9YY10 115 aa4.02□□□□□ -1.77
SPG11-211ENST00000558561 GOLGA6L10A0A0M3HER8 536 aa4.02□□□□□ -1.77
SPG11-211ENST00000558561 FEZF1A0PJY2 475 aa4.02□□□□□ -1.77
SPG11-211ENST00000558561 TLCD2A6NGC4 264 aa4.02□□□□□ -1.77
SPG11-211ENST00000558561 C2orf74A8MZ97 194 aa4.02□□□□□ -1.77
SPG11-211ENST00000558561 H0YGG7 62 aa4.02□□□□□ -1.77
SPG11-211ENST00000558561 STMND1H3BQB6 276 aa4.02□□□□□ -1.77
SPG11-211ENST00000558561 CCDC188H7C350 402 aa4.02□□□□□ -1.77
SPG11-211ENST00000558561 AP4M1O00189 453 aa4.02□□□□□ -1.77
SPG11-211ENST00000558561 TAPBPO15533 448 aa4.02□□□□□ -1.77
SPG11-211ENST00000558561 P2RX6O15547 441 aa4.02□□□□□ -1.77
SPG11-211ENST00000558561 JRKO75564 520 aa4.02□□□□□ -1.77
SPG11-211ENST00000558561 SCRG1O75711 98 aa4.02□□□□□ -1.77
SPG11-211ENST00000558561 WISP2O76076 250 aa4.02□□□□□ -1.77
SPG11-211ENST00000558561 WISP3O95389 354 aaPredicted RBP4.02□□□□□ -1.77
SPG11-211ENST00000558561 ZBTB11O95625 1053 aaPredicted RBP4.02□□□□□ -1.77
SPG11-211ENST00000558561 GUCA1CO95843 209 aa4.02□□□□□ -1.77
SPG11-211ENST00000558561 SLC16A8O95907 504 aa4.02□□□□□ -1.77
SPG11-211ENST00000558561 SYF2O95926 243 aaKnown RBP4.02□□□□□ -1.77
SPG11-211ENST00000558561 ONECUT2O95948 504 aa4.02□□□□□ -1.77
SPG11-211ENST00000558561 EIF2S1P05198 315 aaKnown RBP4.02□□□□□ -1.77
SPG11-211ENST00000558561 NPPBP16860 134 aa4.02□□□□□ -1.77
SPG11-211ENST00000558561 NDUFB7P17568 137 aa4.02□□□□□ -1.77
SPG11-211ENST00000558561 PGAM1P18669 254 aa4.02□□□□□ -1.77
SPG11-211ENST00000558561 NDUFS1P28331 727 aa4.02□□□□□ -1.77
SPG11-211ENST00000558561 IMPA1P29218 277 aa4.02□□□□□ -1.77
SPG11-211ENST00000558561 EPHA3P29320 983 aa4.02□□□□□ -1.77
SPG11-211ENST00000558561 RORAP35398 523 aa4.02□□□□□ -1.77
SPG11-211ENST00000558561 MAGEA4P43358 317 aa4.02□□□□□ -1.77
SPG11-211ENST00000558561 RAB28P51157 221 aa4.02□□□□□ -1.77
SPG11-211ENST00000558561 PGDP52209 483 aa4.02□□□□□ -1.77
SPG11-211ENST00000558561 VSX2P58304 361 aaPredicted RBP4.02□□□□□ -1.77
SPG11-211ENST00000558561 TIRAPP58753 221 aa4.02□□□□□ -1.77
SPG11-211ENST00000558561 ARF3P61204 181 aaPredicted RBP4.02□□□□□ -1.77
SPG11-211ENST00000558561 TUBB4BP68371 445 aa4.02□□□□□ -1.77
SPG11-211ENST00000558561 NAE1Q13564 534 aa4.02□□□□□ -1.77
SPG11-211ENST00000558561 DNASE1L3Q13609 305 aa4.02□□□□□ -1.77
SPG11-211ENST00000558561 RAPSNQ13702 412 aa4.02□□□□□ -1.77
SPG11-211ENST00000558561 TUBB2AQ13885 445 aa4.02□□□□□ -1.77
SPG11-211ENST00000558561 IL11RAQ14626 422 aa4.02□□□□□ -1.77
SPG11-211ENST00000558561 CLPPQ16740 277 aaPredicted RBP4.02□□□□□ -1.77
SPG11-211ENST00000558561 HKDC1Q2TB90 917 aa4.02□□□□□ -1.77
SPG11-211ENST00000558561 KRTAP15-1Q3LI76 137 aa4.02□□□□□ -1.77
SPG11-211ENST00000558561 SYTL3Q4VX76 610 aa4.02□□□□□ -1.77
SPG11-211ENST00000558561 DNAJC21Q5F1R6 531 aaKnown RBP4.02□□□□□ -1.77
SPG11-211ENST00000558561 VWA2Q5GFL6 755 aa4.02□□□□□ -1.77
SPG11-211ENST00000558561 WASHC2DQ5SRD0 308 aa4.02□□□□□ -1.77
SPG11-211ENST00000558561 ADNP2Q6IQ32 1131 aa4.02□□□□□ -1.77
SPG11-211ENST00000558561 MRNIPQ6NTE8 343 aa4.02□□□□□ -1.77
SPG11-211ENST00000558561 ZNF517Q6ZMY9 492 aaPredicted RBP4.02□□□□□ -1.77
SPG11-211ENST00000558561 COX15Q7KZN9 410 aa4.02□□□□□ -1.77
SPG11-211ENST00000558561 CMC1Q7Z7K0 106 aa4.02□□□□□ -1.77
SPG11-211ENST00000558561 HOOK3Q86VS8 718 aa4.02□□□□□ -1.77
SPG11-211ENST00000558561 ZC3HC1Q86WB0 502 aaKnown RBP4.02□□□□□ -1.77
SPG11-211ENST00000558561 CCDC25Q86WR0 208 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms