RNA–Protein interactions for RNA: ENST00000558544.5

TPM1-214, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,399 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-214ENST00000558544 EXO1Q9UQ84 846 aaKnown RBP16.32■□□□□ 0.2
TPM1-214ENST00000558544 WBP11Q9Y2W2 641 aaKnown RBP16.32■□□□□ 0.2
TPM1-214ENST00000558544 CPAMD8Q8IZJ3 1885 aa16.32■□□□□ 0.2
TPM1-214ENST00000558544 CACNA1BQ00975 2339 aa16.32■□□□□ 0.2
TPM1-214ENST00000558544 CACNA1GO43497 2377 aa16.31■□□□□ 0.2
TPM1-214ENST00000558544 SAGE2PA6NJ88 616 aa16.31■□□□□ 0.2
TPM1-214ENST00000558544 ITGB2P05107 769 aa16.31■□□□□ 0.2
TPM1-214ENST00000558544 PRPS2P11908 318 aa16.31■□□□□ 0.2
TPM1-214ENST00000558544 ALOX15P16050 662 aaPredicted RBP16.31■□□□□ 0.2
TPM1-214ENST00000558544 ASMTP46597 345 aa16.31■□□□□ 0.2
TPM1-214ENST00000558544 STT3AP46977 705 aa16.31■□□□□ 0.2
TPM1-214ENST00000558544 XKP51811 444 aa16.31■□□□□ 0.2
TPM1-214ENST00000558544 DIO3P55073 304 aa16.31■□□□□ 0.2
TPM1-214ENST00000558544 PLIN5Q00G26 463 aa16.31■□□□□ 0.2
TPM1-214ENST00000558544 Q0VFX4 171 aa16.31■□□□□ 0.2
TPM1-214ENST00000558544 ELAVL1Q15717 326 aaKnown RBP16.31■□□□□ 0.2
TPM1-214ENST00000558544 EPGNQ6UW88 154 aa16.31■□□□□ 0.2
TPM1-214ENST00000558544 TICAM1Q8IUC6 712 aa16.31■□□□□ 0.2
TPM1-214ENST00000558544 APLFQ8IW19 511 aaPredicted RBP16.31■□□□□ 0.2
TPM1-214ENST00000558544 LRRC34Q8IZ02 419 aa16.31■□□□□ 0.2
TPM1-214ENST00000558544 PPWD1Q96BP3 646 aaKnown RBP16.31■□□□□ 0.2
TPM1-214ENST00000558544 MAELQ96JY0 434 aaKnown RBP16.31■□□□□ 0.2
TPM1-214ENST00000558544 IMMP1LQ96LU5 166 aa16.31■□□□□ 0.2
TPM1-214ENST00000558544 OR52B2Q96RD2 323 aa16.31■□□□□ 0.2
TPM1-214ENST00000558544 CCDC134Q9H6E4 229 aa16.31■□□□□ 0.2
TPM1-214ENST00000558544 ATP13A2Q9NQ11 1180 aa16.31■□□□□ 0.2
TPM1-214ENST00000558544 ASIC5Q9NY37 505 aa16.31■□□□□ 0.2
TPM1-214ENST00000558544 A6NL46 340 aa16.3■□□□□ 0.2
TPM1-214ENST00000558544 OR10H2O60403 315 aa16.3■□□□□ 0.2
TPM1-214ENST00000558544 VIMP08670 466 aaKnown RBP16.3■□□□□ 0.2
TPM1-214ENST00000558544 ALDOCP09972 364 aaKnown RBP16.3■□□□□ 0.2
TPM1-214ENST00000558544 G6PDP11413 515 aa16.3■□□□□ 0.2
TPM1-214ENST00000558544 TNNI3P19429 210 aa16.3■□□□□ 0.2
TPM1-214ENST00000558544 FEN1P39748 380 aaKnown RBP16.3■□□□□ 0.2
TPM1-214ENST00000558544 CCL11P51671 97 aa16.3■□□□□ 0.2
TPM1-214ENST00000558544 AQP5P55064 265 aa16.3■□□□□ 0.2
TPM1-214ENST00000558544 SLC26A5P58743 744 aa16.3■□□□□ 0.2
TPM1-214ENST00000558544 DUSP2Q05923 314 aa16.3■□□□□ 0.2
TPM1-214ENST00000558544 AIMP2Q13155 320 aaKnown RBP16.3■□□□□ 0.2
TPM1-214ENST00000558544 BIKQ13323 160 aa16.3■□□□□ 0.2
TPM1-214ENST00000558544 PRSS53Q2L4Q9 553 aa16.3■□□□□ 0.2
TPM1-214ENST00000558544 BTBD16Q32M84 506 aa16.3■□□□□ 0.2
TPM1-214ENST00000558544 OGFOD2Q6N063 350 aa16.3■□□□□ 0.2
TPM1-214ENST00000558544 ANKRD26P1Q6NSI1 321 aa16.3■□□□□ 0.2
TPM1-214ENST00000558544 DGAT2L6Q6ZPD8 337 aa16.3■□□□□ 0.2
TPM1-214ENST00000558544 ST13P4Q8IZP2 240 aaPredicted RBP16.3■□□□□ 0.2
TPM1-214ENST00000558544 ACTRT2Q8TDY3 377 aa16.3■□□□□ 0.2
TPM1-214ENST00000558544 CNRIP1Q96F85 164 aaPredicted RBP16.3■□□□□ 0.2
TPM1-214ENST00000558544 RBM18Q96H35 190 aaKnown RBP16.3■□□□□ 0.2
TPM1-214ENST00000558544 NPHS2Q9NP85 383 aa16.3■□□□□ 0.2
TPM1-214ENST00000558544 FGFR1OP2Q9NVK5 253 aa16.3■□□□□ 0.2
TPM1-214ENST00000558544 EHD3Q9NZN3 535 aa16.3■□□□□ 0.2
TPM1-214ENST00000558544 PSME2Q9UL46 239 aa16.3■□□□□ 0.2
TPM1-214ENST00000558544 CLCA3PQ9Y6N3 262 aa16.3■□□□□ 0.2
TPM1-214ENST00000558544 ZNF780BQ9Y6R6 833 aa16.3■□□□□ 0.2
TPM1-214ENST00000558544 C17orf105B2RV13 164 aa16.29■□□□□ 0.2
TPM1-214ENST00000558544 TGDSO95455 350 aa16.29■□□□□ 0.2
TPM1-214ENST00000558544 SLC35E2P0CK97 266 aa16.29■□□□□ 0.2
TPM1-214ENST00000558544 CPMP14384 443 aa16.29■□□□□ 0.2
TPM1-214ENST00000558544 COX7A2P14406 83 aa16.29■□□□□ 0.2
TPM1-214ENST00000558544 ITGA3P26006 1051 aa16.29■□□□□ 0.2
TPM1-214ENST00000558544 HPCAL1P37235 193 aa16.29■□□□□ 0.2
TPM1-214ENST00000558544 IDH3AP50213 366 aa16.29■□□□□ 0.2
TPM1-214ENST00000558544 POLE2P56282 527 aa16.29■□□□□ 0.2
TPM1-214ENST00000558544 RAPSNQ13702 412 aa16.29■□□□□ 0.2
TPM1-214ENST00000558544 TERF2Q15554 542 aa16.29■□□□□ 0.2
TPM1-214ENST00000558544 EXT1Q16394 746 aa16.29■□□□□ 0.2
TPM1-214ENST00000558544 PLAG1Q6DJT9 500 aa16.29■□□□□ 0.2
TPM1-214ENST00000558544 KBTBD2Q8IY47 623 aa16.29■□□□□ 0.2
TPM1-214ENST00000558544 GALNT16Q8N428 558 aa16.29■□□□□ 0.2
TPM1-214ENST00000558544 C7orf57Q8NEG2 295 aa16.29■□□□□ 0.2
TPM1-214ENST00000558544 NFAM1Q8NET5 270 aaPredicted RBP16.29■□□□□ 0.2
TPM1-214ENST00000558544 OR14A16Q8NHC5 309 aa16.29■□□□□ 0.2
TPM1-214ENST00000558544 DOK4Q8TEW6 326 aa16.29■□□□□ 0.2
TPM1-214ENST00000558544 PTPMT1Q8WUK0 201 aaPredicted RBP16.29■□□□□ 0.2
TPM1-214ENST00000558544 THOC3Q96J01 351 aaKnown RBP16.29■□□□□ 0.2
TPM1-214ENST00000558544 EBF4Q9BQW3 602 aa16.29■□□□□ 0.2
TPM1-214ENST00000558544 PELOQ9BRX2 385 aaKnown RBP16.29■□□□□ 0.2
TPM1-214ENST00000558544 REEP4Q9H6H4 257 aa16.29■□□□□ 0.2
TPM1-214ENST00000558544 SLC35C2Q9NQQ7 365 aa16.29■□□□□ 0.2
TPM1-214ENST00000558544 GIMAP4Q9NUV9 329 aa16.29■□□□□ 0.2
TPM1-214ENST00000558544 ENTPD4Q9Y227 616 aa16.29■□□□□ 0.2
TPM1-214ENST00000558544 SCAMP2O15127 329 aaKnown RBP16.28■□□□□ 0.2
TPM1-214ENST00000558544 ITGAMP11215 1152 aa16.28■□□□□ 0.2
TPM1-214ENST00000558544 PORP16435 677 aaPredicted RBP16.28■□□□□ 0.2
TPM1-214ENST00000558544 PTGER1P34995 402 aa16.28■□□□□ 0.2
TPM1-214ENST00000558544 PGDP52209 483 aa16.28■□□□□ 0.2
TPM1-214ENST00000558544 RHDQ02161 417 aa16.28■□□□□ 0.2
TPM1-214ENST00000558544 LSM12Q3MHD2 195 aaKnown RBP16.28■□□□□ 0.2
TPM1-214ENST00000558544 LINC00303Q3SY05 128 aa16.28■□□□□ 0.2
TPM1-214ENST00000558544 ZNF385BQ569K4 471 aa16.28■□□□□ 0.2
TPM1-214ENST00000558544 TMEM198Q66K66 360 aa16.28■□□□□ 0.2
TPM1-214ENST00000558544 ACAD11Q709F0 780 aa16.28■□□□□ 0.2
TPM1-214ENST00000558544 SPATA19Q7Z5L4 167 aa16.28■□□□□ 0.2
TPM1-214ENST00000558544 KRTCAP2Q8N6L1 136 aa16.28■□□□□ 0.2
TPM1-214ENST00000558544 B3GNT7Q8NFL0 401 aa16.28■□□□□ 0.2
TPM1-214ENST00000558544 CEP70Q8NHQ1 597 aa16.28■□□□□ 0.2
TPM1-214ENST00000558544 RFWD2Q8NHY2 731 aa16.28■□□□□ 0.2
TPM1-214ENST00000558544 TTC9Q92623 222 aa16.28■□□□□ 0.2
TPM1-214ENST00000558544 DAZLQ92904 295 aaKnown RBP16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 83.6 ms