RNA–Protein interactions for RNA: ENST00000558282.5

CSPG4P12-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 12, humanhuman

BASIC

Gene CSPG4P12, Length 4,853 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P12-201ENST00000558282 CACNA1FO60840 1977 aa11.29□□□□□ -0.6
CSPG4P12-201ENST00000558282 SLC35F4A4IF30 521 aa11.29□□□□□ -0.6
CSPG4P12-201ENST00000558282 AMD1P17707 334 aa11.29□□□□□ -0.6
CSPG4P12-201ENST00000558282 SSTR2P30874 369 aa11.29□□□□□ -0.6
CSPG4P12-201ENST00000558282 ARL2P36404 184 aa11.29□□□□□ -0.6
CSPG4P12-201ENST00000558282 ASPAP45381 313 aa11.29□□□□□ -0.6
CSPG4P12-201ENST00000558282 STC1P52823 247 aa11.29□□□□□ -0.6
CSPG4P12-201ENST00000558282 RAB4BP61018 213 aa11.29□□□□□ -0.6
CSPG4P12-201ENST00000558282 TMEM41BQ5BJD5 291 aa11.29□□□□□ -0.6
CSPG4P12-201ENST00000558282 SIGIRRQ6IA17 410 aa11.29□□□□□ -0.6
CSPG4P12-201ENST00000558282 TMPRSS12Q86WS5 348 aa11.29□□□□□ -0.6
CSPG4P12-201ENST00000558282 OR52E4Q8NGH9 312 aa11.29□□□□□ -0.6
CSPG4P12-201ENST00000558282 OR4Q3Q8NH05 313 aa11.29□□□□□ -0.6
CSPG4P12-201ENST00000558282 OR5AK3PQ8NH89 298 aa11.29□□□□□ -0.6
CSPG4P12-201ENST00000558282 ACOT11Q8WXI4 607 aaPredicted RBP11.29□□□□□ -0.6
CSPG4P12-201ENST00000558282 KCNA7Q96RP8 456 aa11.29□□□□□ -0.6
CSPG4P12-201ENST00000558282 TRIB3Q96RU7 358 aa11.29□□□□□ -0.6
CSPG4P12-201ENST00000558282 RAB11FIP5Q9BXF6 653 aa11.29□□□□□ -0.6
CSPG4P12-201ENST00000558282 FAM230AA0A1W2PPH8 454 aa11.29□□□□□ -0.6
CSPG4P12-201ENST00000558282 C1QBP02746 253 aa11.29□□□□□ -0.6
CSPG4P12-201ENST00000558282 JUPP14923 745 aa11.29□□□□□ -0.6
CSPG4P12-201ENST00000558282 BDKRB2P30411 391 aa11.29□□□□□ -0.6
CSPG4P12-201ENST00000558282 AQP2P41181 271 aa11.29□□□□□ -0.6
CSPG4P12-201ENST00000558282 MAGEB1P43366 347 aa11.29□□□□□ -0.6
CSPG4P12-201ENST00000558282 CHRNA4P43681 627 aa11.29□□□□□ -0.6
CSPG4P12-201ENST00000558282 KCNC3Q14003 757 aa11.29□□□□□ -0.6
CSPG4P12-201ENST00000558282 GRB7Q14451 532 aa11.29□□□□□ -0.6
CSPG4P12-201ENST00000558282 NPY5RQ15761 445 aa11.29□□□□□ -0.6
CSPG4P12-201ENST00000558282 ZNF691Q5VV52 312 aa11.29□□□□□ -0.6
CSPG4P12-201ENST00000558282 ABHD15Q6UXT9 468 aa11.29□□□□□ -0.6
CSPG4P12-201ENST00000558282 GAREM2Q75VX8 874 aa11.29□□□□□ -0.6
CSPG4P12-201ENST00000558282 DNAJC22Q8N4W6 341 aa11.29□□□□□ -0.6
CSPG4P12-201ENST00000558282 OR2T11Q8NH01 316 aa11.29□□□□□ -0.6
CSPG4P12-201ENST00000558282 GJD4Q96KN9 370 aaPredicted RBP11.29□□□□□ -0.6
CSPG4P12-201ENST00000558282 CCM2Q9BSQ5 444 aa11.29□□□□□ -0.6
CSPG4P12-201ENST00000558282 URM1Q9BTM9 101 aaKnown RBP11.29□□□□□ -0.6
CSPG4P12-201ENST00000558282 ABHD16BQ9H3Z7 469 aa11.29□□□□□ -0.6
CSPG4P12-201ENST00000558282 TMEM248Q9NWD8 314 aa11.29□□□□□ -0.6
CSPG4P12-201ENST00000558282 KLK4Q9Y5K2 254 aa11.29□□□□□ -0.6
CSPG4P12-201ENST00000558282 COL1A2P08123 1366 aa11.29□□□□□ -0.6
CSPG4P12-201ENST00000558282 A0A1W2PQH9 124 aa11.29□□□□□ -0.6
CSPG4P12-201ENST00000558282 ARPC1BO15143 372 aaKnown RBP11.29□□□□□ -0.6
CSPG4P12-201ENST00000558282 OSMP13725 252 aa11.29□□□□□ -0.6
CSPG4P12-201ENST00000558282 NFYAP23511 347 aaPredicted RBP11.29□□□□□ -0.6
CSPG4P12-201ENST00000558282 PYCR1P32322 319 aa11.29□□□□□ -0.6
CSPG4P12-201ENST00000558282 KCNQ1P51787 676 aa11.29□□□□□ -0.6
CSPG4P12-201ENST00000558282 ARL6IP1Q15041 203 aa11.29□□□□□ -0.6
CSPG4P12-201ENST00000558282 DCST2Q5T1A1 773 aa11.29□□□□□ -0.6
CSPG4P12-201ENST00000558282 IRAK1BP1Q5VVH5 260 aa11.29□□□□□ -0.6
CSPG4P12-201ENST00000558282 ENPP6Q6UWR7 440 aa11.29□□□□□ -0.6
CSPG4P12-201ENST00000558282 ZNF280BQ86YH2 543 aa11.29□□□□□ -0.6
CSPG4P12-201ENST00000558282 LYSMD2Q8IV50 215 aa11.29□□□□□ -0.6
CSPG4P12-201ENST00000558282 RASGRP3Q8IV61 690 aa11.29□□□□□ -0.6
CSPG4P12-201ENST00000558282 FANK1Q8TC84 345 aa11.29□□□□□ -0.6
CSPG4P12-201ENST00000558282 SORCS1Q8WY21 1168 aa11.29□□□□□ -0.6
CSPG4P12-201ENST00000558282 SLC30A3Q99726 388 aa11.29□□□□□ -0.6
CSPG4P12-201ENST00000558282 NIFKQ9BYG3 293 aaKnown RBP11.29□□□□□ -0.6
CSPG4P12-201ENST00000558282 CD244Q9BZW8 370 aa11.29□□□□□ -0.6
CSPG4P12-201ENST00000558282 SIX4Q9UIU6 781 aa11.29□□□□□ -0.6
CSPG4P12-201ENST00000558282 GPSM3Q9Y4H4 160 aa11.29□□□□□ -0.6
CSPG4P12-201ENST00000558282 JRKO75564 520 aa11.29□□□□□ -0.6
CSPG4P12-201ENST00000558282 BPNT1O95861 308 aa11.29□□□□□ -0.6
CSPG4P12-201ENST00000558282 AMY2AP04746 511 aa11.29□□□□□ -0.6
CSPG4P12-201ENST00000558282 ETFAP13804 333 aa11.29□□□□□ -0.6
CSPG4P12-201ENST00000558282 GGT2P36268 569 aa11.29□□□□□ -0.6
CSPG4P12-201ENST00000558282 UGT3A2Q3SY77 523 aa11.29□□□□□ -0.6
CSPG4P12-201ENST00000558282 C3orf33Q6P1S2 294 aa11.29□□□□□ -0.6
CSPG4P12-201ENST00000558282 C12orf40Q86WS4 652 aa11.29□□□□□ -0.6
CSPG4P12-201ENST00000558282 NRROSQ86YC3 692 aa11.29□□□□□ -0.6
CSPG4P12-201ENST00000558282 DCUN1D3Q8IWE4 304 aa11.29□□□□□ -0.6
CSPG4P12-201ENST00000558282 MRPL41Q8IXM3 137 aaKnown RBP11.29□□□□□ -0.6
CSPG4P12-201ENST00000558282 OR6V1Q8N148 313 aa11.29□□□□□ -0.6
CSPG4P12-201ENST00000558282 OR8D1Q8WZ84 308 aa11.29□□□□□ -0.6
CSPG4P12-201ENST00000558282 ST8SIA4Q92187 359 aa11.29□□□□□ -0.6
CSPG4P12-201ENST00000558282 DDX1Q92499 740 aaKnown RBP11.29□□□□□ -0.6
CSPG4P12-201ENST00000558282 SLC7A6Q92536 515 aa11.29□□□□□ -0.6
CSPG4P12-201ENST00000558282 RBM18Q96H35 190 aaKnown RBP11.29□□□□□ -0.6
CSPG4P12-201ENST00000558282 ZNF514Q96K75 400 aaPredicted RBP11.29□□□□□ -0.6
CSPG4P12-201ENST00000558282 GIMAP2Q9UG22 337 aa11.29□□□□□ -0.6
CSPG4P12-201ENST00000558282 ADAM18Q9Y3Q7 739 aa11.29□□□□□ -0.6
CSPG4P12-201ENST00000558282 TUBAL3A6NHL2 446 aa11.28□□□□□ -0.6
CSPG4P12-201ENST00000558282 TTLL8A6PVC2 850 aa11.28□□□□□ -0.6
CSPG4P12-201ENST00000558282 NUDT19A8MXV4 375 aa11.28□□□□□ -0.6
CSPG4P12-201ENST00000558282 GRM6O15303 877 aa11.28□□□□□ -0.6
CSPG4P12-201ENST00000558282 GABARAPO95166 117 aa11.28□□□□□ -0.6
CSPG4P12-201ENST00000558282 SLC16A8O95907 504 aa11.28□□□□□ -0.6
CSPG4P12-201ENST00000558282 GNRH1P01148 92 aa11.28□□□□□ -0.6
CSPG4P12-201ENST00000558282 AGXTP21549 392 aa11.28□□□□□ -0.6
CSPG4P12-201ENST00000558282 HTR1BP28222 390 aa11.28□□□□□ -0.6
CSPG4P12-201ENST00000558282 PRSS3P35030 304 aa11.28□□□□□ -0.6
CSPG4P12-201ENST00000558282 NRLP54845 237 aa11.28□□□□□ -0.6
CSPG4P12-201ENST00000558282 SMAD3P84022 425 aaKnown RBP11.28□□□□□ -0.6
CSPG4P12-201ENST00000558282 SLBPQ14493 270 aaKnown RBP eCLIP11.28□□□□□ -0.6
CSPG4P12-201ENST00000558282 PUS10Q3MIT2 529 aaKnown RBP11.28□□□□□ -0.6
CSPG4P12-201ENST00000558282 KCTD18Q6PI47 426 aaPredicted RBP11.28□□□□□ -0.6
CSPG4P12-201ENST00000558282 FAM86B1Q8N7N1 296 aa11.28□□□□□ -0.6
CSPG4P12-201ENST00000558282 FRS2Q8WU20 508 aa11.28□□□□□ -0.6
CSPG4P12-201ENST00000558282 THEM6Q8WUY1 208 aa11.28□□□□□ -0.6
CSPG4P12-201ENST00000558282 KCTD12Q96CX2 325 aaKnown RBP11.28□□□□□ -0.6
CSPG4P12-201ENST00000558282 AHCYL2Q96HN2 611 aaKnown RBP11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms