RNA–Protein interactions for RNA: ENST00000557749.5

LINC00648-204, long intergenic non-protein coding RNA 648, humanhuman

TSL 5 BASIC

Gene LINC00648, Length 443 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00648-204ENST00000557749 TNFRSF17Q02223 184 aa10.63□□□□□ -0.71
LINC00648-204ENST00000557749 SRSF1Q07955 248 aaKnown RBP eCLIP10.63□□□□□ -0.71
LINC00648-204ENST00000557749 SLAMF1Q13291 335 aa10.63□□□□□ -0.71
LINC00648-204ENST00000557749 CPSF6Q16630 551 aaKnown RBP eCLIP10.63□□□□□ -0.71
LINC00648-204ENST00000557749 MAPKAPK3Q16644 382 aa10.63□□□□□ -0.71
LINC00648-204ENST00000557749 C6orf163Q5TEZ5 329 aa10.63□□□□□ -0.71
LINC00648-204ENST00000557749 PRAMEF9Q5VWM5 478 aa10.63□□□□□ -0.71
LINC00648-204ENST00000557749 FRG2Q64ET8 278 aa10.63□□□□□ -0.71
LINC00648-204ENST00000557749 FCRLBQ6BAA4 426 aa10.63□□□□□ -0.71
LINC00648-204ENST00000557749 RPTNQ6XPR3 784 aa10.63□□□□□ -0.71
LINC00648-204ENST00000557749 MAMDC2Q7Z304 686 aaPredicted RBP10.63□□□□□ -0.71
LINC00648-204ENST00000557749 CYP4Z2PQ8N1L4 340 aa10.63□□□□□ -0.71
LINC00648-204ENST00000557749 NUDT8Q8WV74 236 aa10.63□□□□□ -0.71
LINC00648-204ENST00000557749 DCAKDQ8WVC6 231 aa10.63□□□□□ -0.71
LINC00648-204ENST00000557749 NCLNQ969V3 563 aa10.63□□□□□ -0.71
LINC00648-204ENST00000557749 RELTQ969Z4 430 aa10.63□□□□□ -0.71
LINC00648-204ENST00000557749 FRG2BQ96QU4 278 aa10.63□□□□□ -0.71
LINC00648-204ENST00000557749 TAAR6Q96RI8 345 aa10.63□□□□□ -0.71
LINC00648-204ENST00000557749 MTERF1Q99551 399 aaKnown RBP10.63□□□□□ -0.71
LINC00648-204ENST00000557749 C1QTNF3Q9BXJ4 246 aa10.63□□□□□ -0.71
LINC00648-204ENST00000557749 NOL11Q9H8H0 719 aaKnown RBP10.63□□□□□ -0.71
LINC00648-204ENST00000557749 DDX31Q9H8H2 851 aaKnown RBP10.63□□□□□ -0.71
LINC00648-204ENST00000557749 HPF1Q9NWY4 346 aa10.63□□□□□ -0.71
LINC00648-204ENST00000557749 KCMF1Q9P0J7 381 aa10.63□□□□□ -0.71
LINC00648-204ENST00000557749 ERRFI1Q9UJM3 462 aaPredicted RBP10.63□□□□□ -0.71
LINC00648-204ENST00000557749 ADAM29Q9UKF5 820 aa10.63□□□□□ -0.71
LINC00648-204ENST00000557749 OSGIN2Q9Y236 505 aa10.63□□□□□ -0.71
LINC00648-204ENST00000557749 ASB1Q9Y576 335 aa10.63□□□□□ -0.71
LINC00648-204ENST00000557749 PRRC2CQ9Y520 2896 aaKnown RBP10.62□□□□□ -0.71
LINC00648-204ENST00000557749 USP9XQ93008 2570 aaPredicted RBP10.62□□□□□ -0.71
LINC00648-204ENST00000557749 A8MUA0 341 aa10.62□□□□□ -0.71
LINC00648-204ENST00000557749 C17orf105B2RV13 164 aa10.62□□□□□ -0.71
LINC00648-204ENST00000557749 ACOT7O00154 380 aa10.62□□□□□ -0.71
LINC00648-204ENST00000557749 DNAJB6O75190 326 aa10.62□□□□□ -0.71
LINC00648-204ENST00000557749 ITGA10O75578 1167 aa10.62□□□□□ -0.71
LINC00648-204ENST00000557749 NEURL1O76050 574 aa10.62□□□□□ -0.71
LINC00648-204ENST00000557749 UNC5CO95185 931 aa10.62□□□□□ -0.71
LINC00648-204ENST00000557749 HSD3B1P14060 373 aa10.62□□□□□ -0.71
LINC00648-204ENST00000557749 HSD3B2P26439 372 aa10.62□□□□□ -0.71
LINC00648-204ENST00000557749 COL8A1P27658 744 aa10.62□□□□□ -0.71
LINC00648-204ENST00000557749 STT3AP46977 705 aa10.62□□□□□ -0.71
LINC00648-204ENST00000557749 RPS13P62277 151 aaKnown RBP10.62□□□□□ -0.71
LINC00648-204ENST00000557749 IGLV3-21P80748 117 aaPredicted RBP10.62□□□□□ -0.71
LINC00648-204ENST00000557749 ZRSR2Q15696 482 aaKnown RBP10.62□□□□□ -0.71
LINC00648-204ENST00000557749 SPINK14Q6IE38 97 aa10.62□□□□□ -0.71
LINC00648-204ENST00000557749 OR52E8Q6IFG1 317 aa10.62□□□□□ -0.71
LINC00648-204ENST00000557749 PAOXQ6QHF9 649 aa10.62□□□□□ -0.71
LINC00648-204ENST00000557749 OPN5Q6U736 354 aa10.62□□□□□ -0.71
LINC00648-204ENST00000557749 RGS9BPQ6ZS82 235 aa10.62□□□□□ -0.71
LINC00648-204ENST00000557749 GALNTL5Q7Z4T8 443 aa10.62□□□□□ -0.71
LINC00648-204ENST00000557749 MILR1Q7Z6M3 343 aa10.62□□□□□ -0.71
LINC00648-204ENST00000557749 ST13P4Q8IZP2 240 aaPredicted RBP10.62□□□□□ -0.71
LINC00648-204ENST00000557749 GHDCQ8N2G8 530 aa10.62□□□□□ -0.71
LINC00648-204ENST00000557749 KIF2BQ8N4N8 673 aa10.62□□□□□ -0.71
LINC00648-204ENST00000557749 WDR20Q8TBZ3 569 aa10.62□□□□□ -0.71
LINC00648-204ENST00000557749 ASB15Q8WXK1 588 aa10.62□□□□□ -0.71
LINC00648-204ENST00000557749 PHF21BQ96EK2 531 aa10.62□□□□□ -0.71
LINC00648-204ENST00000557749 SGCZQ96LD1 299 aa10.62□□□□□ -0.71
LINC00648-204ENST00000557749 GPR137Q96N19 417 aa10.62□□□□□ -0.71
LINC00648-204ENST00000557749 MAPKAP1Q9BPZ7 522 aa10.62□□□□□ -0.71
LINC00648-204ENST00000557749 OR51B5Q9H339 312 aa10.62□□□□□ -0.71
LINC00648-204ENST00000557749 BRF2Q9HAW0 419 aa10.62□□□□□ -0.71
LINC00648-204ENST00000557749 KLHL1Q9NR64 748 aa10.62□□□□□ -0.71
LINC00648-204ENST00000557749 MYOTQ9UBF9 498 aa10.62□□□□□ -0.71
LINC00648-204ENST00000557749 DCDC2Q9UHG0 476 aa10.62□□□□□ -0.71
LINC00648-204ENST00000557749 PCTPQ9UKL6 214 aa10.62□□□□□ -0.71
LINC00648-204ENST00000557749 ERVK-11Q9UQG0 969 aa10.62□□□□□ -0.71
LINC00648-204ENST00000557749 RELNP78509 3460 aa10.62□□□□□ -0.71
LINC00648-204ENST00000557749 DOPEY1Q5JWR5 2465 aa10.62□□□□□ -0.71
LINC00648-204ENST00000557749 USP9YO00507 2555 aaPredicted RBP10.62□□□□□ -0.71
LINC00648-204ENST00000557749 SETXQ7Z333 2677 aaKnown RBP10.61□□□□□ -0.71
LINC00648-204ENST00000557749 ZGRF1Q86YA3 2104 aa10.61□□□□□ -0.71
LINC00648-204ENST00000557749 OR6C76A6NM76 312 aa10.61□□□□□ -0.71
LINC00648-204ENST00000557749 PLPP1O14494 284 aa10.61□□□□□ -0.71
LINC00648-204ENST00000557749 LRRTM2O43300 516 aa10.61□□□□□ -0.71
LINC00648-204ENST00000557749 OR10H2O60403 315 aa10.61□□□□□ -0.71
LINC00648-204ENST00000557749 SIX3O95343 332 aaPredicted RBP10.61□□□□□ -0.71
LINC00648-204ENST00000557749 KRT6AP02538 564 aa10.61□□□□□ -0.71
LINC00648-204ENST00000557749 KRT6BP04259 564 aa10.61□□□□□ -0.71
LINC00648-204ENST00000557749 RPS17P08708 135 aaKnown RBP10.61□□□□□ -0.71
LINC00648-204ENST00000557749 FAM58BPP0C7Q3 252 aa10.61□□□□□ -0.71
LINC00648-204ENST00000557749 ALOX15P16050 662 aaPredicted RBP10.61□□□□□ -0.71
LINC00648-204ENST00000557749 PCSK2P16519 638 aa10.61□□□□□ -0.71
LINC00648-204ENST00000557749 KRT6CP48668 564 aa10.61□□□□□ -0.71
LINC00648-204ENST00000557749 GPR143P51810 404 aa10.61□□□□□ -0.71
LINC00648-204ENST00000557749 HERVK_113P63132 956 aa10.61□□□□□ -0.71
LINC00648-204ENST00000557749 RASA2Q15283 850 aa10.61□□□□□ -0.71
LINC00648-204ENST00000557749 MPEG1Q2M385 716 aa10.61□□□□□ -0.71
LINC00648-204ENST00000557749 ADNP2Q6IQ32 1131 aa10.61□□□□□ -0.71
LINC00648-204ENST00000557749 ZNF793Q6ZN11 406 aa10.61□□□□□ -0.71
LINC00648-204ENST00000557749 GK5Q6ZS86 529 aa10.61□□□□□ -0.71
LINC00648-204ENST00000557749 UBE3DQ7Z6J8 389 aa10.61□□□□□ -0.71
LINC00648-204ENST00000557749 CLNKQ7Z7G1 428 aa10.61□□□□□ -0.71
LINC00648-204ENST00000557749 SLC34A3Q8N130 599 aa10.61□□□□□ -0.71
LINC00648-204ENST00000557749 PLD6Q8N2A8 252 aaKnown RBP10.61□□□□□ -0.71
LINC00648-204ENST00000557749 SLC15A4Q8N697 577 aa10.61□□□□□ -0.71
LINC00648-204ENST00000557749 GOLM1Q8NBJ4 401 aa10.61□□□□□ -0.71
LINC00648-204ENST00000557749 NUBPLQ8TB37 319 aa10.61□□□□□ -0.71
LINC00648-204ENST00000557749 SLC22A8Q8TCC7 542 aa10.61□□□□□ -0.71
LINC00648-204ENST00000557749 SLC2A12Q8TD20 617 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms